Detail


ID : Ahg947243

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947243|scaffold_703472.1
Sequence
TTTGTGTGTT GTTTTTCCAG ATGGTACTGA TGCAAATCTT CGCAAGGACT CTAACAGAAA AAACCATAAC CCTTGATGCT GAAAGTTCCT ACACCATCAA TAACGTCAAG GCACAGATCC AAGACAAAGA AGGGATTCCT CTAGACCAGC AACGGCTTAT CTTTGCCGGT AAACAACTCG AGGATGGCCG TACTTTGGCT GATTACAATA TTCAAAAGGA GTCAATTCTC CACTTGGCCC TTAGGTTGAG AGGTGGTATG CAGATCTTCG TCAAGACTCT TACTGGCAAG ACCATAACTC TTGAGGTCGA AAGCTCCGAC ACAATTGACA ATGTCAAGGC AAAGATCCAA GACAAGGAAG GAATCCCGCC GGACCAGCAG AGACTTATCT TTGCCGGTAA ACAACTTGAG GACGGTCGTA CTTTGGCTGA TTACAATATT CAGAAGGAGT CAACCCTCCA CTTGGTTCTT AGGTTGAGAG GTGGCATGCA AATCTTTGTC AAGACTCTTA CAGGGAAAAC GATAACCCTT GAGGTCGAAA GCTCAGATAC CATCGACAAC GTCAAGGCCA AGATCGAAGA CAAGGAAGGA ATCCCTACGG ACCAACAGAG ACTTATCTTC GCCGGAAAGC AGCTCGAGGA TGGCCGTACT CTTGCTGATT ACAACATCCA GAAGGAGTCA ACCCTTCATC TTGTCCTTCG TCTTCGCGGT GGCATGCAGA TCTTTGTGAA AACCCTCACT GGCAAAACCA TAACTTTGGA GGTTGAGAGC TCAGACACAA TTGACAATGT TAAAGCTAAG ATTCAAGATA AGGAAGGGAT CCCTCCGGAC CAGCAGAGAC TTATCTTTGC CGGTAAGCAG CTTGAGGACG GTCGCACCCT TGCAGATTAC AACATTCAGA AGGAGTCGAC CCTTCACCTT GTCCTTCGTC TTCGCGGGGG CATGCAAATA TTTGTGAAAA CCCTTACTGG CAGAACCATT ACCCTAGAAG TTGAGAGCTC AGACACCATT GACAATGTGA AAGCTAAGAT TCAAGATAAG GAAGAAATCC CTGCGGACCA GCAGAGACTT ATCTTCGCTG GCAAGCAACT TGAGGATGGT CGAACCCTAG CAGATTACAA CATCCAGAAA GAATCTACTC TCCATTTGGT TCTTCGTCTT TGCGGTGGGA TGCAGATATT TGTGAAAACT CTTACCGGTA AAACCATTAC TCTAGAAGTT GAGAGCTCAG ACACCATTGA CAACGTGAAA GCCAAGATCC AAGACAAAGA AGGAATCCCT CCGGACCAAC AGAGACTTAT CTTCGCTGGC AAGCAACTTG AGGATGGTCG CACCCTTGCG GATTACAACA TCCAAAAGGA GTCAACACTC CACCTTGTGT TGCGTCTTCG TGGTGGGATG CAGATTTTTG TCAAGACTTT GACGGGCAAG ACCATCACTC TCGAGGTCGA GAGCTCCGAT ACGATTGACA ACGTAAAGGC CAAGATTCAG GACAAGGAAG GGATAGTTCC GGACCAGCAG AGGCTAATCT TTGCTGGAAA GCAGCTCGAG GATGGTCGTA CTTTAGCAGA TTACAATATT CAGAAAGAGT CGACTCTTCA CCTTGTTCTC CGTCTCCGTG GAGGAAGCTT CTGAACAAGA ACTATACATG GCGGTC
Length1656
Protein Sequence
Protein Residue
Map Locationscaffold_7: 17958176.. 17959553
Download Sequence
A.thaliana
AGI-codeAT5G20620.1
Descriptionubiquitin 4
TAIR curator summaryencodes a ubiquitin polyprotein.
Alias[UBQ4][ubiquitin 4]
Gene coexpression
MR
MR Locus Description
17.3494 Ahg946563 glycosyltransferase family protein 28
24.3311 Ahg496351
39.3065 Ahg934838 Integrase-type DNA-binding superfamily protein
40.5463 Ahg941473
41.2311 Ahg480611 phosphate transporter 3;3
45.4423 Ahg950508 temperature-induced lipocalin
48.0625 Ahg344110 ARM repeat superfamily protein
53.4977 Ahg895204
55.4527 Ahg942923 UDP-D-glucose/UDP-D-galactose 4-epimerase 5
56.285 Ahg325294 Late Embryogenesis Abundant 4-5
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression