Detail



ID : Ahg947758

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947758|scaffold_703987.1
Sequence
GATTCCGACT TGAAACCACA GATGTCAGAA GGCTACGCAA TCGAGCTTTA CTTCGATCCA GCACTCGAAA ACCAAGTTTT GAAAGCATGG AACGCCTTCG CTCGCCGTCA AATCAGTACC AAATTGATCA ACACTGAGTC TCGTCCACAT ATAACACTCT TCTCTACCTC TTTCTTCGAT TCAACGAGAC TCGAATCCGT CATCAAAAAC TTCGTATCGA AGCAAGAACC AATCTCGATC TCGTTCTCCA CTATCGGCAC CTTCTCTAGC GACAACAACG TACTGTTTCT ATCTCCGACA CCGTCTCTCT CGCTTCTTCA GTTACAGTCT CAGTTATGTG ACACGATGAA GAAAGAATCT GTTGAGATTG GTGAAGATTA TCGTGTTGAT TCTTGGGTTC CGTTTTGTCC TGTGGCTCTT GATGTTCCTA AGTCACGTAT GGCTGAGGCT TTCTCTGTGT TGAGAGATTT GAAGCTTCCG GTGAATGGTT ATGGTATGGA GATTGGTCTT GTTGAGTTTT CTCCGGTTCG TGAAGTCTTC TCATTTCCTC TTGGTAACAC TTTGGAGTCT TGATCTGTAG TGTTGGTTTT ATGT 
Length594
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21157883.. 21158476
Download Sequence
A.thaliana
AGI-codeAT5G40190.1
DescriptionRNA ligase/cyclic nucleotide phosphodiesterase family protein
TAIR curator summaryIdentified in a screen for calmodulin-binding proteins obtained from an auxin treated cDNA library.
Alias
Gene coexpression
MR
MR Locus Description
8.94427 Ahg948629 Class I peptide chain release factor
40.4722 Ahg926167
48.5901 Ahg951784 ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism
52.3068 Ahg472271
53.6656 Ahg928170 Cystatin/monellin superfamily protein
55.8032 Ahg470402 CAMV movement protein interacting protein 7
56.9473 Ahg950185 ATPase, V0 complex, subunit E
64.622 Ahg491817 Ribosomal L28e protein family
82.7285 Ahg929144 Metallo-hydrolase/oxidoreductase superfamily protein
83.0783 Ahg488464 Peptidyl-tRNA hydrolase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression