Detail



ID : Ahg947840

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|947840|scaffold_704069.1
Sequence
GTAAATACGA ATGCCCTTGT TGCAATGGAT CGTCACATGA AAGTGGTTTA TGACTTGTTG GCTTTAGAAG TTAACAAAGA GGTTCGTACC ATTGGCATTT GGGGTAGTAG TATAAGGGTG TCGCAAAGGA AGACAACGTT TGCAAGGTAC ATTTATTCAG AGATGTTTGT TAACTTTCAG ACATATGTTT TCCTAGATAA TGTTGAAAAC ATGAAAGACA AGCTTCTAAA GTTTGAAGGG GAAGAAGATC CAACGGTAAT AATAAGCTCA TATCACGATG GGCATGAAAT TAACGAAGCA AGGCGTAAAC ACCGGAAAGT TCTCCTTATC GCTGATGATG TGAACAACAT CGAACAAGGG AAGTGGATCA TTGAATACGC TAACTGGTTT GCTCCAGGAA GCAGAATCAT TCTTATTAGC CAGAACAAGA ATATGCTTGT TGACGCCGGA GTGAAGCATG TGTATGAAGT CACATCTTTC AGACTGTTAG GATCGTTTTT ATATGGTAGA GGTCGAGACG AGTGGGTAGC TACACTGCTC AAACTCAAAG CAAAGCAAGG TGGAAATATA ATGGAAGTGT GAAAAATTTT GGAACCATCA GG 
Length602
Protein Sequence
Protein Residue
Map Locationscaffold_7: 21220537.. 21221241
Download Sequence
A.thaliana
AGI-codeAT5G40090.1
DescriptionDisease resistance protein (TIR-NBS class)
TAIR curator summary
Alias[CHL1][CHS1-like 1]
Gene coexpression
MR
MR Locus Description
5.56776 Ahg949588
7.87401 Ahg912127
11.1803 Ahg336830 peptidyl-prolyl cis-trans isomerases;hydrolases;nucleoside-triphosphatases;ATP binding;nucleotide binding;ATPases
12.1244 Virus0876
17.2916 Virus1798
17.2916 Virus0139
23.4947 Virus0092
28.8444 Ahg929052 Vacuolar protein sorting-associated protein VPS28 family protein
32.311 Ahg496109 Protein of unknown function (DUF1635)
34.4674 Virus1754
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression