Detail



ID : Ahg948245

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948245|scaffold_800132.1
Sequence
TCTACTGTGA AAGGTGGCTT GATGAAGGAC AAAGTGGAGA AGTTTGAGAC AGATGATCTA AAATGGACTG AGAGGCTTCC AGAATGTCCT GTCTACAGAC CAACAAAGGA GGAGTTTGAG GATCCTCTGA CTTATTTGCA GAAGATTTTC CCAGAAGCTT CAAAATATGG TATTTGCAAG ATTGTATCTC CGTTGACAGC AACAGTTCCC GCAGGCGCTG TGTTGATGAA AGAGAAATCA AACTTTAAGT TCACTACCAG AGTACAACCC CTTCGACTCG CCGAGTGGGA TTCTGATGAT AAAGTTACAT TTTTCATGAG TGGGAGGACC TATACATTTC GGGATTATGA GAAAATGGCA AACAAGGTAT TTGCACGTAG ATATTGCAGT GGTGGCTCTT TGCCCGACTC ATTCTTGGAG AAAGAATTCT GGAAGGAAAT TGCGTGTGGC AAGACTGAAA CAGTTGAGTA TGCGTGTGAT GTAGATGGTA GCGCATTTTC ATCTGCACCA GGTGACCCAC TAGGAAGCAG CAAATGGAAC TTGAATAAAG TTTCAAGGCT GCCGAAGTCT ACCCTGCGCC TTCTTGGAAC ATCCATTCCG GGAGTCACTG AACCCATGCT TTACATCGGA ATGCTGTTTA GTATGTTTGC CTGGCATGTT GAGGACCATT ATTTGTACAG CATTAATTAC CAACATTGTG GAGCATCAAA AACTTGGTAT GGGATTCCAG GTTCCGCAGC TCTAAAATTT GAAAAGGTGG TTAAAGAGTG TGTGTACAAT GATGATATTC TATCAACTAA TGGAGAAGAT GGAGCCTTTG ACGTGCTTCT AGGGAAGACA ACTATATTCC CCCCAAAGAT TCTGTTGGAT CATAATGTGC CAGTGTACAA GGCTGTGCAA AAACCTGGAG AATTCGTCGT CACATTCCCT AGGGCTTATC ATGCTGGTTT CAGCCACGGT TTTAATTGTG GTGAGGCAGT GAACTTTGCG ATGGGTGACT GGTTTCCTTT TGGAGCTATA GCCAGTTGCC GGTATGCTCA TCTTAACAGA GTACCATTGC TTCCTCATGA AGAATTGATT TGTAAAGAAG CAATGCTCTT AAACTCAAGT TCCAAATCCG AGAATCTGGA TTTTACACCT ACAGAATTGT TAGGACAACG AAGCATCAAG ACTGCATTTG TGCACCTGAT TCGTTTTCTT CATCTTGCTC GATGGTCTCT AATGAAGTCA GGATTATGCA CAGGCCTTGT TTCGAATACA TATGGAACCA TAGTCTGCAG TTTGTGTAAA CGGGATTGCT ATTTGGCATT TATCAACTGC GAGTGTTACT CACATCCCGT CTGTCTCCGT CATGATATTA AAAAGCTTGA CCTTCCATGT GGGACAACAC GTACTCTTTA CTTGAGAGAT AACATTGAAG ACTTGGAAGC TGCTGCAATG AAGTTTGAGA AAGAAGATGT AGTTTCAGAT TTGATTACAA CTGATGAAGA CTTATATAAG TATCCATCAT CAATTACACT TCCAGCTGCG AAAGAAGATG GATATTCACC GTATTCCACT ATATACTTTG ATTTCTATAC CGAGGTAGAG ATGACATCTC ATGACCAGTT GCAATCTGGA AATTCCGTCA TGAGCTATGA AGCAAACGCT TCATGTATCT CCTCAGTTGC TGATGATTAT GAATGCTCTG ATTACGTAAA TAGACGAGCT AACTGTAGCA GCAGTAGTGA TTCAAAGTTC TCAGAAGAAG TAGCATGCAG CAGTAACAAA AAAACTCGGT TCTTCCCTGC GGTTCAAGAT GAACAACAAC TAGTCGCGGA TCAGGAAAGT GATGGATCTG ATTCCGAGTG TTTCAGAGTC AAACGCCGTT CTTCGTTGAA GTTTGAGAAC CGAACAGTTG TTGTCGACAC AAGAGATTAT GACCATCATC AGGAGCTTAA AAGGCTGAAG AAATCGCTTC ATCACGAAGG AAGATATAGT AGTAGCAGTA GTGTTAGTAG GCAAGAAGAA GAAGAAGAAG AAGAAGTGTT AGTAATTTCA AACAGGAAAG AAACTCAGCA ACAAAGTGAC GTGAAGATGC AGAAGAAGAG GATCGAGAAT CAGTTTGGTG GCTTTAAACG TCTGAAAGTG AAAGGGCTAA TAAAGCCGTA ACGTGACAGC TTCAAGTTTC CTCCTAACTA CAATTCTTTT AAAATGGCTG 
Length2200
Protein Sequence
Protein Residue
Map Locationscaffold_8: 620375.. 623520
Download Sequence
A.thaliana
AGI-codeAT5G46910.1
DescriptionTranscription factor jumonji (jmj) family protein / zinc finger (C5HC2 type) family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
18.6548 Ahg489094 NAC domain containing protein 90
22.0454 Ahg496943 Protein of unknown function, DUF547
37.1483 Ahg470234 Drought-responsive family protein
48.1248 Ahg482539 Nucleotide-diphospho-sugar transferases superfamily protein
51.2055 Ahg913285 ARM repeat superfamily protein
53.4041 Ahg494895 Glutamate receptor family protein
71.8331 Ahg929255 Nodulin MtN3 family protein
90.9615 Ahg476139 formin 8
95.2103 Ahg471603 Galactose oxidase/kelch repeat superfamily protein
98.102 Ahg923049 inositol polyphosphate 5-phosphatase 11
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression