Detail



ID : Ahg948675

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948675|scaffold_800562.1
Sequence
ACCATCACCT ATCTTACAAA AATGGAGTTC TCAAACTCTT TGCTCTCTCT TTTACTCTTT TCACTGTGTG TTTCTCCTCT CTCTGCTCTT GTTTCAGCTC ATAACCACGA AGACTTTCTT AAGTGTCTTT CTCACAGGAT AAACGACAAC ACCGTCGTAT CCAAAGTCAT ACACACTTCC AAAGGCTCTT CCTTTTGTTC CATCTTGGAT TCTTCCATAC AAAATCCAAG ATTCTCTGTT CCTGAAACAC CTAAACCGGT CTCAATCATC ACTCCGGTTA AAGCCAGTGA CGTTCAAACC GTCATCAGAT GCGCACGGCT GCATGGTATC CATGTAAGGA CTCGCAGCGC CGGTCACGGC TGGGAAGGTC AATCTTACAT CGCGTACAAC AAACCATTCG TCGTCATCGA TCTTAGGAAT CTTCGGTCTA TATCATTAAA CGTTGATGAC CGGACTGGTT GGGTCCAAAC CGGAGCAACG ACTGGAGAGT TATACTTTGA GATTGGGAAA ACCACCAAAT CTCTTGCTTT CCCGGCCAGT ATCCACCCAA CCGTCGGAGT CGGTGGACAG TTTAGCGGCG GAGGTTACGG CACGTTGCTT AGAAAATACG GTTTAGCGGC GGATAACATA ATCGATGCAC TTGTGGTTGA CGCGCGTGGG AGGATTCTTG ACCGACAAGC AATGGGTGAG GATTACTTTT GGGCGATTCG TGGAGGTGGC GGATCAAGCT TTGGTGTTGT ACTATCGTGG AAGATTAAGT TAGTCGATGT TCCGTCCACG GTCACCGTGT TTAAAGTCCA GAAAACATCG GAGAAAGAGG CTGTTAGGAT CATCAACAAG TGGCAGTATG TTGCAGCTAA GGTTCCTAAT GATCTTTTCA TCAGCGCAAC GTTGGAGAGA TCAGACAAAA ACTTAGTGCA CGCTTTGTTT ACGGGACTTT ATCTTGGTCC GGTGAACGAT CTGTTGGCCT TGATGGAAGA AAAGTTTCCG GAGTTAAATC TTGAGATGGA AGATTGCACA GAGATGAGTT GGGTTGAGTC TGTACTCTGG TTTGCTGATT TCCCAAAAGG AGAGTCGCTT GGTGTTCTCG CGAATCGGAA GCGTACATCT CTGTCTTTCA AGGGTAAAGA TGATTTTGTC CAAGAACCGA TACCCGAGGC TGCAATTCAA GAGCTATGGA GGCGATTAGA GGCGCCTGAG GCTCGGCTTG CAAAGGTCAT ATTGACTCCA TTTGGTGGGA AAATGAGTGA AATCGCAGAG CACGAAACAC CGTTCCCACA TCGAGAAGGG AATCTCTATG AGATTCAGTA TTTGGCTTTT TGGAGAGAAG AGGAAGACAA GAACAAGATG GAAACAGAGA AGTATCTGAA ATGGGTCGAG AGCGTTTACA ATCTTATGAC TCCTTATGTT TCGAAATCTC CAAGAGGAGC TTATGTCAAT TTCATGGATC TTGATTTGGG AATGTATCTT GGAAAGGAGG AGACAAAGTA CGAGGAAGGA AAGAGTTGGG GAGTGAAGTA TTTCAAGAAC AATTTCGAGA GATTGGTGAG GGTGAAAACG AGTGTTGATC CAACAGATTT CTTCTGCGAT GAACAGAGCA TTCCGATACT CAAATCCGTT GACGACATCT AAAACTATCC TTTGAAGTTT TAT 
Length1653
Protein Sequence
Protein Residue
Map Locationscaffold_8: 3156697.. 3158349
Download Sequence
A.thaliana
AGI-codeAT5G44440.1
DescriptionFAD-binding Berberine family protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
9.16515 Ahg931758 Major facilitator superfamily protein
18.5472 Ahg929907
18.9737 Ahg896853 Domain of unknown function (DUF26)
20.567 Ahg907234 F-box and associated interaction domains-containing protein
21.7486 Ahg312489 Polyketide cyclase/dehydrase and lipid transport superfamily protein
28.2135 Ahg938512 Plant self-incompatibility protein S1 family
31.0483 Ahg949989 Protein of unknown function (DUF295)
34.5543 Ahg931891
39.95 Ahg924232 transposable element gene
40.4351 Ahg492241 CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression