Detail


ID : Ahg948842

Blast(Query):  A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|948842|scaffold_800729.1
Sequence
TCTTTGTTCT GCAAGAAACT AAACCATGGC TCTTGAAGCT ATGACATTGT CTTTATCCAA TTCTGCCATG TTTTCATCAG GTGTTGTTGA AGATGATAAG AAGCAAGAAG CATTTGTTTT CCCCAAATTT GTTGTGATGG GTCATAGAGG TTTTGGGATG AACATGCTTC AATCTCCGGA CGAGAAAATG AAATTTATCA AAGAAAATTC TATTCTTTCT TTCAGTGTTG CTGCAGATTT CCCTATTGAC TTCATTGAGT TCGATGTCCA GGTAACAAGA GATGGTTGCC CTGTTATTTT CCATGATATC TTCATGTTCA CGCAAGAACA GGGAGTGATT ATTGAGAAAA GAGTAACAGA AATGGCTTTA CATGAATTTC TCTCATATGG ACCACAAAAG GATGGAACAA ATGTAAAGCC TATGTTGAGA AAGACAAAAG ATGGTAGAGT TTTCGAATGG ACAGTCGAAA AGGATGCTCC TTTGTGTACC CTTGAAGAAG CTTTCGTAAA AGTTAAACAC TCACTCGGAT TCAATATCGA GCTCAAATTC GATGATAATA CCGTTTATGG AGAAGAAGAG TTACGTCAAA CTCTTGACAA CATCTTGAAG GTTGTAGATG AGCATGCCAA GAACCGGCCC ATTATCTTCT CGAGCTTTCA TCCTCATGCG GTTCGACTCA TTAGAAATAT GCAAAGGAAT TATCCTGTAT TCTTCTTAAC AAATGGTGGA TGTGAAATTT ATAAGGATGT CAGAAGGAAC TCATTAGACG AGGCCATAAA GCTTTGCAAA GAAAGCGGTT TGCAAGGGAT TGTATCTGAG GTTAAGGCCA TATTAAGAAC ACCAAACGCA ATCACACGAG TCAAAGATTC AAAACTTTCA CTTCTATCTT ATGGCCAGCT TAACAATGTG GTGGAGGTGA TTTACTTACA ATATCTGATG GGTGTGGAGG GAGTGATTGT TGATATGGTC AAGGACATCT CTGAAGCCAT CGCGAATATC GAAGTTACAA ACAAGGACGA TTGCGAAGAT GACGATGGAA AAAAGTGTCT GATTAGGTTT GGAGAGGAGA GGAAAAAGCT GGAAATTTCT AAGGATGAGA TCACTTTGTT AACTAAGTTC GTACCAAAAC TGCTTCAACA ATGAAGATTT TGCTTCATTA ACACT
Length1165
Protein Sequence
Protein Residue
Map Locationscaffold_8: 4202230.. 4204917
Download Sequence
A.thaliana
AGI-codeAT5G43300.1
DescriptionPLC-like phosphodiesterases superfamily protein
TAIR curator summary
Alias[AtGDPD3][GDPD3][glycerophosphodiester phosphodiesterase 3]
Gene coexpression
MR
MR Locus Description
7.61577 Ahg483646 SPX domain gene 3
13.3417 Ahg920694 Pyridoxal phosphate phosphatase-related protein
15.5885 Ahg472566
18 Ahg910535 alpha/beta-Hydrolases superfamily protein
19.975 Ahg493744 HSP20-like chaperones superfamily protein
20.199 Ahg493534 Protein of unknown function (DUF803)
21.3307 Ahg927841 lecithin:cholesterol acyltransferase 3
24.7184 Ahg471996 Protein of unknown function (DUF789)
25.0998 Ahg494919 FKBP-type peptidyl-prolyl cis-trans isomerase family protein
27.6586 Ahg478284 ascorbate peroxidase 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression