Detail



ID : Ahg949254

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|949254|scaffold_801141.1
Sequence
GTAGTTGAAA AGTTTTTTTA ATGGAGAGAT TTTGTTTCAA AAATCCAATT TTGCTATCGT TTCTTCTTGT TTTGCTTCTC TTCATCTCCA TTGCTTCTAC TCAAAACGAC GACGTTGATC ATGGACGTAA ACGGGTTCAG ATCCGGGTCG GGTTGGTATT GGATTTGGGT TCCGTGGAAG GGAAGATAGT GAAAAGCTCT GTTTCAATGG CTCTTTCAGA TTTCTACGCT ATTAACAATG ATTACAAAAC TAGAGTCTCT TTTTCAGTCA GAAACTCTCA TGGAGAGCCT CTTCTTGCTC TTGCTTCTGC TGTAGATCTG TTGCAAACTG AAGGAGTGGA AGCGATAATT GGCGGGAATT CGTTGTTGGA AGCGAAGCTT TTAGGGGAAC TTGGAGAGCA AGCTAGGGTT CCTGTGATTA CGCTTAACTC TCCCATGTCA TTGTCATTGA GTAAATACAG TTACTTGATC CAAGCCACAC ATGATTCTGT CTCTGAGGCT AAGGGAATTA TAGCTTTCAT CAATGGGTTT GATTGGAACA GTGTTGCTCT TCTTTATGAA GATCATGATG ACTGGAGAGA GAGTATGCAT TTTATGGTAG ACCATTTCCA TGAGAACAAC GTTCGTGTAC AGTCCAAGGT TGGTTTTACT GTCTCTTCAA GTGAGGATTT TGTGATGGAT CGTTTACAGA AACTGAAGGA CTTAGGAACA ACAGTCTTTG TTGTTCACTT GTCTAGAGTT ATTGCAACTC ATCTCTTCCC ATGTGCTGGG AGATTAGGGT TGATGGGTGA AGGGTTTGTT TGGATCCTCA CTACTAAAAC AATGAACAGC TTCAATGAAA ACATTGACGA TTTCTCAAAA GAGGCAATGG AAGGTGTGGT TGGTTTCAAG TCCTACATTC CAATGTCTAA AGAGCTTCGA AATTTCACTT TAAGATGGAG AAAATCATTG CTGGTTGAAG AAGCGGAGAT AACTCAGTTG AGTATCTCTG GCGTATGGGC TCACGATATC GCTTGGGCTC TAGCGAGTGC AGCGGAAGTT ACAAGGATGC CAAATGTATC ATCAACTCTC CTTGAGGCAA TCTCAGAGAG TAGATTTAAG GGTTTGAGTG GTGATTTCCA GTTGCATGAT AAGAAGTTGT TATCAAAAAA GTTTGAGATT GTGAATATGA TAGGATCAGG TGAGAGAAGG GTAGGATACT GGAATTCTAA TGGTAGTTTC AGCAGTAGAA GACATTTATC TTCTACTCAT GACAAGCTGG AGACCATCAT TTGGCCCGGT GGGTCTGCTC AAAGTCCGAA AGGGAGTAGT CTAAGAGAGA GCGGTAGAAA AAAGCTGAGG GTTTTGGTTA CATCTAGCAA TAGATTTCCA AGACTGATGA AAGTTGAGAC TGATCCGGTA ACAAATGAAG TAATTGTCGA AGGGTTCTGT ATAGAAGCTT TTCGGGCTTC GATTAGTCCT TTCAACTATG AAGTTGAGTA CATACCTTGG CTTAATGGAA GTAACTACGA CAATCTTGCA TATGCACTTA GTAGCCAGAA AGACAAATAC GATGCAGCTG TGGGAGATAT TACAATCACT TCCAATAGAT CGATGTATGT TGATTTTACG TTGCCATTCA CCGAAATGGG TCTTGGAATT GTAGCACTAA AGGAGAGAAG TATGTGGGTG TTCTTCCAAC CTTTAACACC AGACCTATGG ATAACAAGTG CATCTTTCTT TGTTTTGACC GGCATTATAG TTTGGTTGAT AGAAAGATCT GAGAACAAAG AGTTCCAAGG ATCTTGGCCA CAACAGATTG GAGTTGTGCT TTGGTTTGGC TTCTCTACCC TTGTTTATGC TCACAGGGAG AGGCTAAAAC ACAACTTATC AAGATTTGTA GTTACAGTTT GGGTATTTGC GGTGCTCATA TTGACCGCTA GTTACACTGC AACATTGACA TCAATGATGA CGGTGCAACA GATACGATTC AACTCAAATG AAGACTACGT GGGTCACCTT TCGGGCTCCC TTATCGCAAA TGTGGCTCTC ACTAGTTCCA GCCTCCGAGC AATGAGATCA CTAGGTCTCA ATAGTTCTGC AGATTATGCT CACGCCTTGC TGAACAAGAC TGTCTCTTTT GTTGTTGATG AGTTACCATA CCTCAAAGTT CTCCTTGGCG AGAATCCGAC ACATTTTCTT ATGGTCAAGA CACAATCTAC CACCAACGGT TTCGGCTTTA TGTTTCAAAA GGGCTTTGAG TTGGTGCCTA ATGTGTCCCG GGAGATTGCG AAGCTTAGGA CGAGCGAGAA GCTAAACGAG ATGGAGAAGA GATGGTTTGA TAAACAACTT CCATACACAA CCGATGATAC ATCAAATCCT ATAACCCTTT ACCGATTCCG CGGGTTGTTT ATGATAACCG GAGTTTCATT CGCTTTCGCT CTTGCAGTAC TTCTTATTCT CTGGCTCCGC GACGAATGGA CAGGTCTTGT GGATTCGGTT AAACTATTCA TCTCGCGACA AATTATACAT TTCAGGATCC ACTTTGCAAG AAATATCCAT CCTAGTCCTC TCGATGACCC CATTGGCGGA AATGCAGTTC AAATGGCTCA ACGTAACAGA CAATAGGAAC AGATTACGAT AGATAA 
Length2626
Protein Sequence
Protein Residue
Map Locationscaffold_8: 11031220.. 11036914
Download Sequence
A.thaliana
AGI-codeAT5G48410.1
Descriptionglutamate receptor 1.3
TAIR curator summarymember of Putative ligand-gated ion channel subunit family
Alias[ATGLR1.3][GLR1.3][ARABIDOPSIS THALIANA GLUTAMATE RECEPTOR 1.3][glutamate receptor 1.3]
Gene coexpression
MR
MR Locus Description
1.41421 Ahg938998 lectin-receptor kinase
2 Ahg470358 Glutaredoxin family protein
2.64575 Ahg488124 WRKY DNA-binding protein 75
3 Ahg479323 Putative membrane lipoprotein
4.3589 Ahg346167 receptor serine/threonine kinase, putative
5.2915 Ahg490882 Auxin-responsive GH3 family protein
6.32456 Ahg327109 Peroxidase superfamily protein
7 Ahg471510 Protein of unknown function (DUF1262)
7.48331 Ahg915766 NAD(P)-binding Rossmann-fold superfamily protein
7.74597 Ahg481850 senescence-associated gene 13
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression