Detail



ID : Ahg950172

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950172|scaffold_802059.1
Sequence
GTATAATCTG ATAAAAAGTA AGATGTCTGC TACTCAGGAA GAAGACAAGA AGCCTGACCA AGGAGCTCAC ATCAATTTCA AAGTCAAGGG ACAGGATGAT AATGAAGTCT TCTTTAGGCT CAAGAGAAGC ACTCAGCTTA AGAAGCTTAT GAATGCTTAC TGTCACCGTC AATCTGAGGA TATCAACTCA ATTGTTTACT TCTTTGATGG TCGTCGTCTT CGTGCAGGGC AGACTGTAGA TGAGCTTGAT ATGGAAGATG GAGATGTGAT CTATGCGTGC CACTCACAAG GCGGTGGTCT ACAAGCAGAT CATGGTCTAC GAGCAGATCA GCGTCAGTGG TCTTATATGG TTTTCGATCA TAATCGGCTC TAGGGATAAT TTGGCAGGCT TTGT 
Length394
Protein Sequence
Protein Residue
Map Locationscaffold_8: 15903729.. 15904632
Download Sequence
A.thaliana
AGI-codeAT5G55160.2
Descriptionsmall ubiquitin-like modifier 2
TAIR curator summaryEncodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays.
Alias[ATSUMO2][SUM2][SUMO 2][SUMO2][SMALL UBIQUITIN-LIKE MODIFIER 2][small ubiquitin-like modifier 2]
Gene coexpression
MR
MR Locus Description
4 Ahg907673
7.2111 Ahg940321
7.2111 Virus0279
10.9545 Ahg470522 Peroxidase superfamily protein
12.8452 Virus1663
18.4932 Ahg347073
19.799 Ahg939402 ROTUNDIFOLIA like 14
21.4942 Ahg337335
22.5832 Ahg894754 TRAF-like family protein
28.9828 Ahg890707 SCR-like 10
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression