| Annotation |
|---|
| Description | jgi|Araly1|950365|scaffold_802252.1 |
| Sequence |
ATTATTCTCC GGCGGAGACA ATGGAATCTT CCGTCGCTCC GTTTCCTCAC CGACGCACGC ATCTCTCGAA TCGGACTTAT CGTTCTTTGC TTCATCACCT CTGCTCGAGT TTCGATCGGG AGCCTCGAGT TTCGCTTGCT ACACCGGCCG TTCTTCACGA GCTGGTCTTA AGAACAGAAA TTGCTCCAGT GTCTCCGGGA GAAACTTGCA AACCACCGGA GAATCTATCA ATGGTAGAAT CAAAATCCAA TGGAGTGTCT GTTGATTTAA GAGGTGAGAA TTCGCAGGAA AAGAGTTTGA TGCTTGGAGA TGTTTTTGAT GGAATTGACT TGCAAGATGC ATCTGTTGGT ATTAGACACA CAGATTTTTT CGATAGCTTT GAGCTTATGA TAAATGAAAA TCCAGACTTT GTTCCAGAAA GTTGTGTGAA TCTCTTTGAG GCATTGGATG TGAATGACTA TGATGGTGAT GGTATGGTTG CTTCACTAGA TAATATCGCG AAACAACCGC TTGATTTTGT TCAAAATGTC GTGGAGAAGC CTAATATTTC AACTGAAAGT GATAAAAAGG TAGAGGAGGT TCCTAAATCT GCTGAATCTA ATGAAGTTAA AAGTTCTGGA TTTTTGGAAG CTTGTGATGA AACAGTTCAA AGAGAGATGG AATTGGAGAA ACCTGTTGAT AGTACTCCGG TTTTGGTAGA TTCCGTGTCT CGGATAGTTG AAGATGATGA TGTAGAAGAA GGAGAGATAT CTGGGGATGA TAATGATGAT ATGCTTGTAG AAGATGATGA ACCAGTCGAA AGACATGAGG AGTGTCAGGT CTCACGAGAT GGGATTGGTA ACAGCCATCT CACAAGTCAT GAGAGTTTTG GAAAAGAGCT TGGTGTTGAG ATGGATCCTG GAACCTCCAT TAAAAAAAGG TCTGCGCCTT CTAAGGACGC AAAAGCCAGA AAGAGGGCAA AAGCTAGGAA GAAAAGAGCT AAAGAGCGTA TAGCCCTTGG CGTGAAAAAG CTGAAACTGA AACCAGTAGC TCCAAAACCA AAGCCTATAA AGTATTGTCG ACACTATCTC AAGGGACGGT GCCATGAGGG AGATAAATGC AAATTTTCAC ATGATACAAC TCCGGAAACC AAATCTTCGG CTTGCTGCTA CTTTGCAACC CAATCATGTA TGAAAGGAGA TGATTGTCCT TTCGACCATG ATCTCTCCAA ATACCCCTGC AATAATTTCA TTACTAAAGG TTTCTGCCAC AGGGGTGATA GTTGTTTGTT TTCGCACAAG GGTACTCCAC AATCTGCTTC AGACACGCCG AGTGCAAATG TAACAGCCTC ATCAACTAAC ATCACTGCAG CGTCGTTCTC TCCTCAGAAA ACAAACAAAC AATCCGTGAG AGAGGCAATA GCCAAATTAC CGGGAATCCA AGCAAGAGTT TCAAGCTCTG TTGGGTTTTT GAAGCCCTTG AGTCAATCTA ACCATAGAAA CCCATCTGAT GCATTATCTC CAAAGATCAA TGAACCTGTA ACGCATCCCC AGGTTCTTCC TTTGAGAAAA CCATCCGTTG CTCCAAAGGG TATGAGTTTT CTCTCTTTAG ACAAAACCTT CCAAGAGGAT ACGGTGAAAG TGTCTCCTGC GTCCAAGCGA AACACAGACA ACTCTGATAA TCAGACATTG AAGCAGTCAC AACTGGGAAG CTCTCTTCCT CTGGTGCCTC CAAAAGGAAT CAGTTTCTTA TCATTTGCAT CAGAGGAACC AAAAACTCTG AATCGAGAGC CTCAAGAACC ATCAAGTAGT AGAAATCTCA AGACAACTCC TAGCTCACAC ATTCAAAGTT CTCTACTCTC AGCAATGAAA CTAGCTGCAG AATTCGAATC CGCTAAAGTT GAAAGACGGA ACAATGATCC AACAGAAGCT GTAAATAAGA GCAATGTTAC TACTGTTAAC ACGACAGTAA CCAGAAACTC AGGGAACATA TCTTCCAAGA TTCTCGAGTT CTTGTCGAGC TTTAGCCAAG GCAAAAACTG ATCTTTATTT GGTTTTTGAG A |
| Length | 2041 |
| Protein Sequence | |
| Protein Residue | |
| Map Location | scaffold_52: 5271.. 7703 |
| Download Sequence |
|
| A.thaliana |
|---|
| AGI-code | AT5G56930.1 |
| Description | CCCH-type zinc finger family protein |
| TAIR curator summary | |
| Alias | [EMB1789][embryo defective 1789] |
| Gene coexpression |
|---|
| MR |
| MR | Locus | Description |
| 24.4949 |
Ahg902342 | Radical SAM superfamily protein |
| 29.4279 |
Ahg483334 | vascular plant one zinc finger protein 2 |
| 35.1141 |
Ahg312620 | Surfeit locus protein 5 subunit 22 of Mediator complex |
| 38.4448 |
Ahg475391 | Uncharacterised conserved protein UCP031279 |
| 40.694 |
Ahg338919 | Protein kinase superfamily protein |
| 43.2666 |
Ahg475757 | cytochrome c oxidase 15 |
| 47.4763 |
Ahg945791 | cysteine-rich RLK (RECEPTOR-like protein kinase) 15 |
| 68.6731 |
Ahg358384 | calnexin 1 |
| 80.4239 |
Ahg486559 | |
| 82.6136 |
Ahg922803 | Ribosomal protein S7p/S5e family protein |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|