Detail



ID : Ahg950466

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|950466|scaffold_802353.1
Sequence
TTTCAGCTTT GTATCGTAAA ACGATGAGGT TTCTAAGCCT CGTCGGAAAC TCATTCGGTT GTTCTGCGTC CGGCGAACGC TTAGTATCAG CGGCCAGAGA CGGCGATTTA CAGGAAGCCA AAGCTCTCTT AGATTACAAC CCAAGACTCG CTCGTTACTC TACTTTTGGC GTTCGTAACT CTCCTCTTCA TTACTCTGCC GCTCAAGGCC ACCACGAGAT AGTTTCTCTG TTGGTGGAAT CAGGAGTTGA TATTAATCTC CGGAACTACC GTGGACAGAC GGCTTTGATG CAAGCTTGTC AACATGGTCA TTGGGAGGTT GTTTTGATTC TGATTCTCTT TGGTGCTAAT ATTCACAGAT CAGATTACTT AAATGGCGGT ACTGCTTTAC ACCTTGCGGC TTTAAATGGT CATCCTCGGT GTATCAGGAT CTTGCTTTCG GAGTATATAC CAAGTGTTCC TAATTGCTGG AGCCTTTTAA AGAATAAGAA ATCTTCAGTT GCTGGATTTG ATCCAAGTGT TCTTCACGAA GTGATCAACA GAGCAGCAGA TGGAGGAATC ACACCTCTTC ATGTAGCGGC TTTGAACGGA CACATAGAGA CGGTGCAGTT GCTCTTGGAT TTGGGAGCTT CGGTTACTCA GGTCACAGTG GAAGATGGAA CCACAATAGA TCTTATAGGT GCTGGGAGTA CAGCTCTTCA TTATGCTTCA TGTGGCGGAA ACACGCAGTG TTGCCAGCTT TTGATCAGTA AGGGTGCTTG TTTAGCTGCC GTAAACTCCA ACGGATGGAC GCCATTGATG GTTGCTCGTT CATGGCACCG GAACTGGCTG GAAGAAATCC TGAACCCAAC CACAGAACAA CCACAACTCC ATTTGCCAAA TGTCCCCTCT CCTTTCCTCT GCCTTCCTTT AATGAGCATT GTCAAGATTG CTCAAGAATG CGGCTGGCGA GAAAACGATT GTCTCACTCC ATGTCGTGAC CCTTGTGCCG TTTGTTTGGA AAGAAAATGC ACTGTAGCAG CAGATGGATG TGCTCATGAG TTCTGCACAA ACTGCGCATT ATACCTAAGC ACCACAAACA TAACATCATC AAAGACATCA CAAGCCACCC CAGGCTCTGT CCCATGTCCT CTCTGTCGCA ACGGCATTGT ATCTTTCACC AAACTTCCCC ATACAATAAC AGCAACAACA ACAACATCAT CAAGAACAAG CATCTCCTTG TCCTTTTGCA CTTGCTCCTC TGATGTCTTA GACACAGCTC TCCTCACTAA CCCTCATTAC AGTTGTAGAC CGGTTGTGTC AAGAACCGGT ACTCGAATTC CACAATCTGC TAGATCATCA TCGTTTCGGT CTCTTAGCTG CCGGCGGTTT CCTCCAAGTC TCTGCCTTGG TGGCTCAGAT GTTGATGAAC CGCAAAGCCG GTTAATGGGT GGATCATATT CAAGATCCGG TGTAGGATTC AGGCGCTCGA CGTCACAGGT TGAAGGGAAA CGTTCTTGGT TTTCTGCTCT TAACCATTGT GTTACAACCG GTGGAAGTGC TTGCTAACTC AAAACGTTCG TCGTTTTTT 
Length1569
Protein Sequence
Protein Residue
Map Locationscaffold_8: 17179086.. 17181538
Download Sequence
A.thaliana
AGI-codeAT5G57740.1
DescriptionXB3 ortholog 2 in Arabidopsis thaliana
TAIR curator summaryubiquitin ligase
Alias[XBAT32][XB3 ortholog 2 in Arabidopsis thaliana]
Gene coexpression
MR
MR Locus Description
19.6469 Ahg894625
25.219 Ahg341965
29.8329 Ahg347795 Protein kinase superfamily protein
44.8665 Ahg916765 RPM1 interacting protein 3
57.3934 Ahg346167 receptor serine/threonine kinase, putative
58.2237 Ahg482845 Integrase-type DNA-binding superfamily protein
60.0666 Ahg484673 NAC domain containing protein 3
60.8933 Ahg329709 translocase 11
71.7217 Ahg906766
74.0945 Ahg495644 Protein kinase superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression