Annotation |
Description | jgi|Araly1|951020|scaffold_802907.1 |
Sequence |
GGAAAATTAA GCTCTTTGGT ATGAAAATTC CTTTCCCGAC GGTTTTAGAG GTTACTACTG ATGAAGAAGA AGAAGAAAAG AACCAAAACG AGACGTTAAC TGATCAATCG GAGAAAGACA AAACCCTTAA GAAACCAACC AAGATTCTTC CATGTCCAAG ATGCAACAGC ATGGAGACAA AATTCTGTTA CTACAACAAC TACAACGTAA ACCAACCTCG CCATTTTTGT AAAGCCTGTC AGAGATATTG GACCTCTGGT GGGACCATGA GAAGTGTTCC CATCGGAGCA GGACGACGCA AGAACAAGAA CAACTCATCG TCATCAACTT CACATTACCA CCACGTGACT ATCTCCGAAA CAAATGGTCC GGTCCTTAGT TTCAGCCTCG GAGATGATCA AAAGGTCTCG AGTAATAGGT TCGGGAATCC AAAGCTAGTG GCTAGGATAG AGAACAATGA CGAGCGCTCA AATAACAACA CTTCGAACTG CTTTCCAGGA GTTTCGTGGC CGTACACGTG GAATCCTGCG TTTTACCCGG TTTACCCTTA CTGGAACATT CCAATGTTGT CTTCTCCGGT TAATTCAAGT CCTACTTCTA CTCTTGGTAA GCATTCGAGG GACGAAGACG AAACGGTGAA GCAAAAACAG AGGAACGTAT CTGTATTGGT TCCTAAGACT TTAAGAATTG ATGATCCTAA TGAAGCTGCA AAGAGTTCTA TATGGACAAC ACTTGGTATC AAGAACGAAG TTATGTTCAA TGGGTTTGCT TCGAAGAAAG AGGTTAAGAT TAATAACAAA GAAGAAACAG AGACTTCTCT TGTTCTTTGT GCAAACCCTG CTGCGTTATC AAGATCAATC AATTTTCATG AGCAGATGTG ATTGTATACA TATGATATAT A |
Length | 901 |
Protein Sequence | |
Protein Residue | |
Map Location | scaffold_8: 19256884.. 19258395 |
Download Sequence |
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A.thaliana |
AGI-code | AT5G62430.1 |
Description | cycling DOF factor 1 |
TAIR curator summary | Dof-type zinc finger domain-containing protein, similar to H-protein promoter binding factor-2a GI:3386546 from (Arabidopsis thaliana). Represses expression of Constans (CO), a circadian regulator of flowering time. Interacts with LKP2 and FKF1. Expression oscillates under constant light conditions. Mainly expressed in the vasculature of cotyledons, leaves and hypocotyls, but also in stomata. Localized to the nucleus and acts as a repressor of CONSTANS through binding to the Dof binding sites in the CO promoter. Protein gets degraded by FKF1 in the afternoon. |
Alias | [CDF1][cycling DOF factor 1] |
Gene coexpression |
MR |
MR | Locus | Description |
4 |
Ahg313311 | Dof-type zinc finger DNA-binding family protein |
8.83176 |
Ahg488595 | Homeodomain-like superfamily protein |
9.64365 |
Ahg928955 | |
10.9545 |
Ahg496423 | myb domain protein 96 |
11.6619 |
Ahg488432 | CONSTANS-like 1 |
13.2288 |
Ahg341087 | |
13.4164 |
Ahg476091 | Dof-type zinc finger DNA-binding family protein |
16.9115 |
Ahg472167 | Erythronate-4-phosphate dehydrogenase family protein |
18.6548 |
Ahg495005 | Ca2+-binding protein 1 |
19.1311 |
Ahg495528 | B-box type zinc finger family protein |
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RNA-seq |
Seasonal expression (July 2011 to June 2013) |
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The four seasons |
|
Growth Chamber expression |
|