Detail



ID : Ahg951374

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951374|scaffold_803261.1
Sequence
TTCTCTGCAT CGAGAGAGAG ATGTGGGTTT TCTATCTGAT CTCGTTGCCT CTAACCCTAG GATTAGTTGT TTTCACGCTC CGTTACTTCG CCGGACCGGA GATTCCTCGG TACGTTCTTA TCACCGTTGG ATACACCTGG TTCTGCTCTG TCTCCGTTAT CATCCTCGCT CCTGCCGACA TTTGGACGAC ACTATCTCTG CAACCTGATC ATCCTGAGAA TGGTGCCATT TCCTTCTTAT GGAGTTGGTC ATACTGGAGT ACGTTTCTAC TCACCTGGGC TGTGGTGCCC CTTATTCAGG GTTTCGAAGA TGCTGGAGAC TTTACCGTGT CAGAGCGATT GAAGACTAGC GTCCATGTCA ACTTAGTTTT CTATCTAGTA CTGGGATTTA TTGGTCTTCT CGGTCTTATC CTTCTCGTCA TGATGCACAG GAACTGGAAA GGTAGCATTT TGGGTTATGC TATGGCATGT TCAAATACTT TTGGGCTGGT CACTGGTGCA TTTCTTCTAG GCTTTGGCTT GAGCGAAATA CCTAAGACCC TTTGGAAGAA TGCAGATTGG ACCACCCGCC AAAAAGTTCT CTCGCACAAA ATTGCCAAAA TTGCTGTGAA ACTTGACAAT GCCCATCAAG AACTTTCAAA TGCGATTGTA GTTGCTCAAG CGACTTCAAC TCAAATGTCC AAGCGTGATC CTATGAGACC ATACATGAAT GTTATAGATG CTATGCTGGC TAAAATGTTC AGGGAAGACC CATCATTTAA GCCACAAGGT GGTCAATTGG GCGAAAATGA TATGGACTAT GACACAGATG AGAAATCAAT GGCAACGTTA AGGCGGCACC TTCGAAATGC TAAGGATGAA TATTATAGAT ATAAAAGTGA GTATCTAACT TATGTCACGG AGGCCCTTGT TCTTGAAGAC ACAATGAAGA ATTATGAACG CCGTGATGCA ACTGGATGGA AATACATTTC AAGCTTCAGA GCCACTCGAA CTGGGAAAAT GGGAAATCTT CTCGATACAT TGGAATTTAT GTGGAGGTGT ATATTGAAGA AACAAATTCA GATGGTGTTG GCAGTAGTTA TGGGGATTAT GTCTGCTGCA ATTCTTTTAG CAGAGGCAAC TCTCCTTCTT AGTAAACTGG ACTTGTCCCT CTTCTCAATA CTTATAAGCT CTGTCAAATC CGATGAACTG CTAGTGCAGG CATTTGCTTT TGTACCTTTG GTGTATATGT GCGTCTGCAC ATATTATTCA CTTTTCAAAA TTGGGATGCT GATGATTTAT TCCTTGACTC CTCGACAAAC AAGTTCTGTG AATCTACTAA TGATTTGCTC GATGATTGCT CGATATGCGC CACCAATATC TTACAATTTT ATTAATCTCA TTCAACTTCA TTCCGAGACT ATATTTGAGA AGAAAATGGG TAGAATTGAT GATGCTGTCC CGGTATTTGG ACAACGGTTC AATGAAATCT ATCCTCTCAT AATGGTTATC TACACATTGC TAGTTGCAAG CAATTTTTTT GATCGCATAT TTAATTACTT CGGTAGCTGG AAAAGATTTA GATTTCAAAC AGAGACCGAG GATACGGATG GATTTGATCC TTCGGGGTTA ATGATTCTTA AAAAAGAACG AACCTGGCTC GAAGAAGGAC AAAAAGTCGG CGAGCATGTT CTTCCACTAG CGAGGAACTT CAACGATGTT GACATTGAAC CAGGAAGCAA TTTTTCTGAA AATTCTTCTG TTGAAATGAA GATGTCGTCA AGCTATGACA TAGACACAGT AAAAGGAAGT TCATCAAAAG ACCATATGTC CCGTAAATAC GGATCAGCTA GAGAAGCAAT CACTAACAAA TACGCAGCCA TTAGAGAACA ACAGAACAAA CACTCGCCAT CTTCTATGAC AAAGCCAGAG AACATGGCTT CAGCTAAAGT GTCCTTACTG GAAACAGACA ATTCGGGTCC AAGTAATGGT CAAGGATCAG GAGAGCCATC TTCTCGTCTG GCTTCCACAT GGAGAAACAT GAAACTAGGA ATCCAGAGTT TTAAAGAGAA TGTAGCTACC AAGAAGTTTC TTCCATTAAG ACAAAGCCCA GAGACAACAA CACTAACAAG CACAAGAGTA GTGACTTCAT CAGTGCCACA GTCGCTAGAT GAGATATTCC AGAGACTGAA AAACCGGTCT GTAGAACACG GGCACTACCT CGATGATGAT GATGAAGTTT GACTATGAAG ATGATGTTCA TA 
Length2242
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20542342.. 20546744
Download Sequence
A.thaliana
AGI-codeAT5G65290.1
DescriptionLMBR1-like membrane protein
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
5.74456 Ahg340841 agenet domain-containing protein
8.06226 Ahg492525 PLAC8 family protein
10.5357 Ahg478367 FAD-dependent oxidoreductase family protein
14 Ahg488788 alpha/beta-Hydrolases superfamily protein
19.4422 Ahg485366 VIER F-box proteine 2
20.347 Ahg476888 AMP-dependent synthetase and ligase family protein
20.7846 Ahg481178 Protein kinase superfamily protein
26.6083 Ahg482091 ARM repeat superfamily protein
28.775 Ahg920458 Concanavalin A-like lectin protein kinase family protein
35.7211 Ahg477743 RNA polymerase II transcription mediators
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression