Detail



ID : Ahg951435

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951435|scaffold_803322.1
Sequence
ACGAAATATT TTGTTGAGTC ATGGAGAGAA GCGCCGTTGC CTCAGGTTTT CATCAAAATT ACATCCTCTA CCCTTCACGC GCCGCCACTT CCACCACGCG CCTCCACTCT TTCTCCTTCC TCAGAAACTT TCCGTCTTCC TCTCTCAGGA TTCGCCAGTC TCCTTCTCCC GTCTCTTCCA ATTTGATCAT TAGCTGTGAA ATTTCACGTA ACCGATGCGA CGCCGTTTCT TCCAGCAGCA CCGATGTGAC TGAATTAGCC GAAATTGATT GGGACAAGAT TGATTTTGGG CTAAAACCAA CGGATTACAT GTACGCCATG AAATGTAGCC GTGATGGTGA ATTCTCTCAA GGTCAATTGC TTCCTTTTGG TAACATTGAA ATCAACCCAT CAGCTGCTGT ACTCAACTAT GGTCAAGGTT TGTTTGAAGG ACTAAAAGCT TACAGAAAAC AAGACGGTAA CATTCTCCTC TTCCGTCCTG AGGAGAATGC GATCCGAATG ATAAATGGCG CTGAAAGAAT GTGCATGCCT TCTCCAACCG TCCAACAGTT TGTTGAGGCT GTGAAAACTA CTGTATTAGC AAACCAACGC TGGATTCCAC CTCCAGGTAA AGGTTCATTA TACATAAGGC CATTGCTTAT GGGAACTGGA GCTGTTCTTG GTCTTGCTCC TGCTCCTGAA TACACTTTCC TCATCTTTGT TTCACCCGTC GGGAACTACT TCAAGGAAGG TGTTGCGCCG ATCAACTTAA TTGTTGAAAA TGAATTCCAT CGTGCAACTC CTGGCGGTAC TGGAGGTGTT AAAACCATCG GTAATTATGC TGCAGTCTTG AAAGCACAGT TGATTGCGAA AGCTAAAGGG TATTCTGATG TTTTATACCT TGATTGCGTT CATAAAAGAT ATCTCGAGGA GGTTTCATCG TGTAATATTT TCATTGTGAA GGATAATATC ATATCTACTC CTGAAATTAA AGGAACCATC TTGCCTGGAA TAACCCGGAA GAGTATAATC GAAGTGGCTC GTAGCCAAGG TTTCAAGGTG GAGGAACGAA ATGTGACCGT TGATGAATTG GTAGAAGCGG ACGAGGTTTT CTGCACAGGA ACCGCCGTTG TTTTATCTCC GGTTGGAAGC ATTACTTACA AAAGCCAAAG GTTTTCCTAT GGAGAAGATG GCTTTGGAAC AGTCTCGAAA CAACTCTACA CTTCCTTAAC GAGCCTGCAA ATGGGTCTGA GCGAAGATAA CATGAACTGG ACTGTTCAAT TGAGTTAAAC CAGCCAAGAA CATATTAT 
Length1288
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20805688.. 20807899
Download Sequence
A.thaliana
AGI-codeAT3G49680.1
Descriptionbranched-chain aminotransferase 3
TAIR curator summaryEncodes a chloroplast branched-chain amino acid aminotransferase. Complements the yeast leu/iso-leu/val auxotrophy mutant.
Alias[ATBCAT-3][BCAT3][branched-chain aminotransferase 3]
Gene coexpression
MR
MR Locus Description
7.34847 Ahg943260 adenosine/AMP deaminase family protein
26.3059 Ahg489939
36.8917 Ahg473585 lectin protein kinase family protein
44.3058 Ahg324038 SET domain-containing protein
51.2933 Ahg477731 WRKY DNA-binding protein 39
54.2679 Ahg471074 Cysteine proteinases superfamily protein
66.8281 Ahg497266 UDP-Glycosyltransferase superfamily protein
82.7164 Ahg487997
93.1665 Ahg336541 HISTIDINE TRIAD NUCLEOTIDE-BINDING 2
93.6162 Ahg493614 PLANT CADMIUM RESISTANCE 2
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression