Detail



ID : Ahg951445

Blast(Query) A.halleri   /   A.thaliana (RECIPROCAL DATA)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|951445|scaffold_803332.1
Sequence
TATCAGCCGT ATTAATTAAG ATGATGGAAA TAGCTTATCA GCCTCGGATT GATTCCGAGA TCGAATCACT CGTCGAGAGA ATCAATCCTC CCAGGGTTTG TGTAGACAAC GACTCAGACC CAGAGTGCAC ACTTATTAAG GTAGATAGCG CGAACAAGTA CGGGATATTA CTGGATATGG TTCAAGTGTT CGCCGATCTT GATCTCGTTA TCTCCAAATG TTACATCTCA TCTGATGGTG AATGGTTCAT GGATGTGTTT CACGTGACAG ACCAACTCGG AAACAAGCTC ACAGACCGAA GCCTTATTCT CTACATTCAA CAGGCAATAT GTTCTAGTAG AACGGGAGGT ATAACAAAGG AGATGCAGAG TAATCTAAAA CGGGAGGTGC AACAGCGCCA CGTTTCAACA GAGCACACGG CCTTTGAGAT AACCGGAATC AACAGACCGG GTCTACTGTC CGAAATATCT GCCGTACTTT CCGACATTGG ATGTCACGTG ACGGCTGCAG TGGCATGGAC CCACCACGAG CGAGCGGCGA TGGTGATTTA TCTAGAAGAC GGGTTCAACG GTGGGCCTAT AATCGACCCA ATAAGAAAGG CCCAAGTAAA GGATCATCTT GATACAGTCA TGGAGGCCCA TCACAGAGTT GGCGATGTGT CTCATGTTGT CGTGAGGGTT GTCGAGGCTA AAGGAGCTCC CGTCGGGTGG GCTCACACTG AGCGACGACT TCACGAGCTA ATGTACGGAG AAGGAGATTA CGAGAATTGC TTCGACTGCG ATTGTTTCGG AGACAGGTGC GATGCTTTGT GGAGAGGAAG ATGCGAGAGG ATACACGTGA CGATCGAAGC ATGTAATGGC TATTCAATGG TGAATGTTAA GTGTAGAGAC AGACCAAAAC TACTTTTCGA CACGGTGTGT GCATTGAAAG AGTTACAATT CGTAGTGTTT CACGCCGTCG CCGGAGCTAA AGGATCGACG GCGGAGCAAG AATATTTCAT AAGAAAGAAG AACGGGTGCA CGTTAGAAAC GGAAGTGCAA AGAGAAAGAC TAAGGCATTG TTTGGTTGCT GCGATTTCGA GACGTGCTTC ACGAGGTTTG AAACTCGAGA TTCGGACTGA GAATAAGATG GGTTTGTTGT CGGATGTGAC TAGAGTCGTG AGAGAAAACG GTTTATCGAT AACGAGAGCT GAGATGTGCA CGCAAGGTGA GATTGCGGTT GGCTCGTTTT ATGTCACGGA TGTGAATGGT GGTGAGACGG ATCCGAGTGC GGTTGAAGCG GTTGAACGAG AATTAGGTGG AGCGGTTGTG TCAGCGGTTA AAGCGGTTGG GATGATGCCG AAGAGGATGG GTTCAACGAG TGATAGTGTG GAGCAAGACA AAGCTAAGTC GTCGATTGGG AGATTGTTTT GGTCTAAATT AGAGAGATTG TCAACGTCTA TAAGATCGTT GTGAAGTGTT TGATTAGAGG ATTTT 
Length1475
Protein Sequence
Protein Residue
Map Locationscaffold_8: 20852845.. 20854904
Download Sequence
A.thaliana
AGI-codeAT5G65890.1
DescriptionACT domain repeat 1
TAIR curator summaryMember of ACT domain containing protein family. ACT domains are amino acid binding domains. Shows strongest expression in flowers and siliques.
Alias[ACR1][ACT domain repeat 1]
Gene coexpression
MR
MR Locus Description
6.32456 Ahg477856 Protein phosphatase 2C family protein
15.9687 Ahg950891 Protein kinase superfamily protein
16.3707 Ahg341087
24 Ahg921726 RING/U-box superfamily protein
27.1293 Ahg494585 P-loop containing nucleoside triphosphate hydrolases superfamily protein
29.2404 Ahg488524 Chaperone DnaJ-domain superfamily protein
30.1496 Ahg483095 Protein of unknown function (DUF399 and DUF3411)
35.9166 Ahg928955
38.8844 Ahg496615 dentin sialophosphoprotein-related
42.8602 Ahg493949 Raffinose synthase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression