Detail


ID : Ahg952380

Blast(Query):  A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952380|scaffold_6500005.1
Sequence
GTTTTCCTCA AAGAAGATCT TTCATGGCTT CTTCTTCTTT GGCTGTGAAA CCGACCCCAA CGGGGCCTCA AGTGTTCATA TGCTTCCGGG GGGCAGATGT CCGTAAACAC TTCATAAGCT TTCTTGACCC TGCCTTGAGA AAAGCGAATA TAAACGTCTT CATAGATGAG GACGAGTATT TGGGCTCAGA TTTGGTTAAC CTATTGAAGA GGATAGAAGA GTCGGAGATC GCGCTAGTGA TCTTTTCGGA GGAATTCACA AGTTCGTATT GGTGCTTGGA GGAGCTGGCC AAGATCAAGG ACTGCAAGGA TCAAGGAAAA TTTGGCGATC ATTTCAGGGA TCAAATACGC AATCTTAGAC ACCAGCCAGA AAGAACTCAG AAATGGGAGG ACGCTTTATT GTCTATTCCT GAATCAATAG GCATGCCTTT AGCAGCCCAA AGTGACAGGA CCGATAAAGA CTTCATAACC TCAATGGTCA TCAAGATTCA GAGATTGGTG GAGCATATGG CCGTCAAAGG AAACCAAGAA ACAGAAGCGA ATCTTCCAGG AGGTTCCATC GTCCCAGCAA TGAAACCAAA AAGAGAAGCG AATAGTCAAG GAGGTTCCAT GGTCCTTGCA ATGAAGCCAG AAACAGAAGC GAGTCATCAA GGAGGTTTCG TGGTCCCTGC AAGGCAACTA GGAATTGCTT TTTCCTATAA ATCTCGATGC TGGTCTTGGA GCACTATCAC AGGACCTAAC AAACAAGTCA GTCCCTATCT TTTCAGCTCC GAGGCCATTG ATATTGTGAC GATGAAAAAA GTTTACTGGC TTAAAATAGT CGGAACATTC AAAACGGGGG ATCTAACACC AGGAACAAAG TATGAGGTTG TGTTTGTAGT GAAATTAAAA GATAATGCAA TTGGATGGGA GAAACCAGTG ACTCTGAAGC TGAAGGTGAT ACACCACAAT GGAGACAACG ATCGGGTGGA ACGAATAGAG AACTTGAACG ATTACATAGG CCGCAACTGG GTGGATATTT TGGCCGGAGT TTTTGTGGTT CCGCCGAAAA ACACTCCCGC AATTATTACT TTCACCATGT ATGAGACCGA ATATAAGAAA AAAGGACTCG TCGTCAAAGG GGTTACAATT CGTCCCACGA ACTAATGCGC ACAAGCAAAG GCATAT
Length1166
Protein Sequence
Protein Residue
Map Locationscaffold_8: 2471454.. 2473440
Download Sequence
A.thaliana
AGI-codeAT5G45080.1
Descriptionphloem protein 2-A6
TAIR curator summary
Alias[AtPP2-A6][PP2-A6][phloem protein 2-A6]
Gene coexpression
MR
MR Locus Description
8.83176 Ahg921997 Zinc finger C-x8-C-x5-C-x3-H type family protein
19.5959 Ahg336232 F-box family protein
23.6643 Ahg922306 Calcium-binding EF-hand family protein
31.749 Ahg923726
41.833 Ahg489614 AGAMOUS-like 89
48.2079 Ahg894590
48.2183 Ahg352151 F-box family protein
52.6498 Ahg895151 Protein of Unknown Function (DUF239)
72.4983 Ahg946628 Tudor/PWWP/MBT domain-containing protein
81.6578 Ahg490578 cellulose synthase like D4
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression