Detail



ID : Ahg952422

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952422|scaffold_7000004.1
Sequence
AGTTTCTTAG CAAAGCAAGA ATGTGTTTTC CAAAGCTTCC TCTTTTGGGG CTGTTCCTGC CCCTAGCCAT CTTAAACTCT CCGGCCTCCG CCGATGGACC CATCTGTCCT CAGACCGAGA CACTCAGCCG AGCTAGTTTT CCCAAAGGCT TTCTCTTTGG CACGGCCAGT GCTGCGTTTC AGGTTGAAGG AGCCGTAGAA GAAGCTTGTA GAGGACCGAG CGTGTGGGAC ATCTACTGTA GGAAATATGC ATTCAGATGC AGTGGCGATA ACGGCGATGT GGCCACTGAT TTCTACCATC GTTACAAGGA AGATATTAAA TTAATGAAGA ATTTGAACTC AGACGCCTTT AGGGCATATG CATTGGTATA ACTTGAAAGA TGGATCTTAG G 
Length391
Protein Sequence
Protein Residue
Map Locationscaffold_70: 15317.. 16360
Download Sequence
A.thaliana
AGI-codeAT1G75940.1
DescriptionGlycosyl hydrolase superfamily protein
TAIR curator summaryencodes a protein similar to the BGL4 beta-glucosidase from Brassica napus. The ATA27 protein is predicted to have an ER retention signal and an acidic isoelectric point, suggesting that it may be localized to the ER lumen.
Alias[ATA27][BGLU20][BETA GLUCOSIDASE 20]
Gene coexpression
MR
MR Locus Description
2 Ahg479102 Mannose-binding lectin superfamily protein
3.4641 Ahg952424 Glycosyl hydrolase superfamily protein
3.74166 Ahg948387
3.87298 Ahg479097 PYK10-binding protein 1
9.53939 Virus1841
9.53939 Virus0247
14.6629 Virus0864
15 Virus2019
19.4165 Virus3294
19.5959 Ahg888791
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression