Detail



ID : Ahg952541

Blast(Query) A.halleri   /   A.thaliana (NOT RECIPROCAL)     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
Descriptionjgi|Araly1|952541|scaffold_86500001.1
Sequence
CACGACTGAA GGATAAAGAT ATGGATGAGT CTGCTTTAGG TACTGAGGGT ATGGTTGAGG TGAAAGAAGT GATCCACAAT GCTATAGAAA GCAGCTCTCA AGGCCATCCA CAAAAATCCT CAACTCCTTC TTTGCCTCCA CTGTCTCTGG CGGGAGAAAC TTCAGGGTCT TCTCAACCCA ATTTACCTCC TCACAACCTA AACAGCACAG AACCACTGTC CTCGGCGGAA GCAATCAGAT TTCCACCACC TGAAGAAGAA TATGTGATAG CAGCAGCACC ATCTGAAGCA CATGGGCCTA GTCTAGAGGG AATCACTGGT ACGACAAAGT CTATCTCGCT AGATAGCAAA AGCTCTGAAC CAAAATCTAC CAACCAAGAT GGAGACTTAG ATCCAGAAGC TGATGATAAA ATTGAGTCTG TTCGAATCCC GCTTCATTGA GATAAGCCTT TAGATGAGAA 
Length460
Protein Sequence
Protein Residue
Map Locationscaffold_865: 1931.. 2446
Download Sequence
A.thaliana
AGI-codeAT5G44800.1
Descriptionchromatin remodeling 4
TAIR curator summary
Alias[CHR4][PKR1][chromatin remodeling 4][PICKLE RELATED 1]
Gene coexpression
MR
MR Locus Description
12 Ahg346476 P-loop containing nucleoside triphosphate hydrolases superfamily protein
12.6491 Ahg946123 Leucine-rich repeat protein kinase family protein
14.1421 Virus3839
30 Virus3098
54.9272 Ahg496121 Gibberellin-regulated family protein
65.521 Virus0592
82.5288 Virus0761
86.7871 Ahg921260 Heat shock protein 70 (Hsp 70) family protein
87.5329 Ahg485412 GRAS family transcription factor
91.0165 Ahg497417 basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression