Detail



ID : Virus0006

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionAvian_endogenous_retrovirus_EAV-HP|vertebrates|Retro-transcribing
Sequence
TCCAGCTGCT CATCTGCAGG ACAGAGCGCT TGACAACCCA TGAGAGGAAC TGTTGTAGGC GTAGCGAGGG AAACGAGGTG TGTTGTAGGC GTAGCGAGGG AAACGAGGTG TGACGCGTGC AGGTTCCTAT GCCACCTGTG TGTTATGCCA CCTGTGTGTG CCAAGTGTAA CTTCGTGATT GGAGGAAACA CTTGTATTTA AACACGTAGC CTATAGCAAT AAACGCCATT TGCCTCACTT ACTCCTGGGG TCTGGGTGAG CATCTGGCCC CGACCTGGTA AAGGGTCGGT TTCGCCCAGC AGTAAGCCCT ACATGTGGAC AGAGGACGAA CACCGGAAGA GCGAACGGAG ACTACATGCA ACAAGTGGTG ACCCCGACGT GATCTGTCTG CTGAGGGTAG CTGCCCGGCA TGCCCGTGAC GTGGAGAAGA GCCTGTGAGG TGGCGGCAGG TCGCGCACGG AAGACGTATT GCGGTTAAGA GCCTGCGAGG TGGCGGCAGG TCGCATACGT AACAATGGAC CAAGTCATTA AGGTACTTGT GCAGTTTTGT AAGGACTACT GTGGAAAATC TACTCCTTCC CGGAAGGAGA TCGCGACAGT TTTGTCGCTG TTAAATGAGC TGGGGGAGCT GGACTCTCCC CGCCACGTTT TGGATTCGAG TAGGTGGGAC TTGCTCACCT TGGCGCTATG CCAGCGCGCC ATGGCCAGTC AGAAGGCTAC GGAACTTAAA ACGTGGGGAC TGATGTTAGG AGCCCTTAAG GCGGCCAGGG CAGAGCACAA ACTTGGCGCG GTCATGAGCG GGGAGGGAGC TCCGGGGAGC GGATCTCTGG AGTTTTGCAG GACCGGCGCT CAGACCGGCG CTCAGACGAC AGCGAATAAA ACGGCGACGG AGAGAGAGGA AGATTGCGAG AAGGACAACG AAGAGTCGCA GAGGCTCGGG GGGGGTGCAA CGACGCCGAC GGCCCCTCCT AATTCTATTG CGCTGTCGCC GCCCCCGCCC TACCCTAAGC AGCCGTTATA TCCTTCCTTG GCAACGACAT CGGAGCAGGG GGCGGGACCA TCCCCAAAAG GGAAGGGGGA GGGGAGACTT AAGCTTACTG ATTGGGGGCA GATCAAAGAG GAAGTGGCAC AGAAAGGCCT GGCGGCAACT TATACACTCC CAGTTGTTGT CTCGGAGGAG GGAGGCCCAA TCTGGGTCCC GTTGGACCCA AAGGGGGTAG CAAGGATGAT TGAGGCAGTA GAAAAGAAAG GGCTGAAGTC GCCATTGACG ATGAATGCCC TTGAGGCCCT CACAGCATCG GGCCCAATGC TGCCTTATGA TATTGAAAAT TTAATGCGCA TGGTGTTGAA ACCAGTGCAG TATACGCTCT GGAGAGAGGA GTGGCATACC AAATTAAAAC AAATGCTGAT TACGGCGCAG GGTGATCAAA GAAACCCCAT ATATGGGTCT GATATACAGA GATTAACGGG CAATGCACCA GGTCTGCTGA CCCCTCAAGC ACAAGTTTGT CAACTTAGAC CAGGAGAGTT GATAGCGACT ACGGACGCTG CAATAGACGC GTTCCGAAAG CTTGCAAGGA GCGCTGAGCC CACTACTCCG TGGACAGAGA TCGCGCAAGG CCCCACAGAG CCGTTTCAGG AGTTTGCAGA CAGACTAATT AAGGCAGTGG AAGGCTCGGA TCTGCCCAGA GCAGTTCACG GTCCCGTCAT CCTGGATTGC TTGTATCAGA AGTCCAGTGA AGGGGTGCAG GGGATTTTGC GAGCGGCGCC GGGGAGGCTC CAAACCCCTG GTGAGGCCAT CAAGTATGTC CTAGATAAGC AAAAGGCCTG TCCGTCTGTG GCAGGGGAGG TAGCTGCGGC GGTAGCAGGA GTGATGATGG CCTGTAGGGA GGCGGACCAT CGTAGTGCGG ACCGACAGTT AGGACCTTGC TTTAAATGTG GCCAGTTGGG CCATATTAGG GCCCAATGCA GAATGGGCAC GGGTGGAGGT GTAACATGTC AGCAGTGTGG GCGGAAGGGT CATGCAGCAC CGCAATGCAG GGCCCGTAGG CCTCCAAGCC AGGGAAATAA CAACGGGAGA CAGTCCGAGC ACGGTGACAT CATTTTTCGA CCTATGCAGG CCCCTGACCT AAGTTTACCC ATGGCGGCGC TGTCTCTAAG TACCCATGAG CGCCCTCTGG TGAAAGCCAC TATTTCTTGC ACCAACCTCC CGCCGGATTT TCAAGGCCCT CTATCTATCT TTGTCACTGC CCTCATAGAT TCCGGCGCCG ACGTTACTGT GGTCACGGAA ACAGAATGGC CATCCTCGTG GCCCGCGGAG GCCTCGCAGT CTATTATGGG GGTTGGAGGG GCGACCCCCT CACGCCGGTC TACCAATGAG GTACAAGCGG TTGTGATTAA CAGGGATGGC TCCTTAGAGA AACCGGCGTT GCTTACGCCA TTGGTGGCGC GTGTCCCCGG AACTCTTCTG GGGCGGGATT TCTTGCGACA GATAGGCATT CCACAGTATC CTCTGAACAC CTTCAAGGGA TACGTCACTA ATGTTACTGC TTGCGATAAC GATGCCGATT TAGCCAGCCA AACAGCATGC TTGATAAAGG CTCTAAATAC AACCCTCCCT TGGGACCCCC AAGAATTGGA TATTTTAGGG TCCCAGATGA TCAAGAACGG AACAACACGT ACGTGTGTTA CCTTTGGTTC AGTGTGCTAT AAAGAGAACA ATCGCAGTAT AGTCTGTCAC AATTTTGATG GGAATTTTAA TGGGACTGGT GGGGCGGAAG CAGAATTGCG TGACTTCATA GCAAAATGGA AAAGTGATGA CCTTCTTATA AGGCCCTATG TCAACCAATC ATGGACGATG GTAAGTCCAA TAAACGTAGA GAGTTTTTCA ATAAGTCGTA GATATTGTGG ATTCACCAGT AACGAGACTC GTTACTATAG AGGGGACCTT TCTAATTGGT GTGGTTCAAA AAGGGGAAAA TGGTCAGCGG GGTACAGCAA CGGGACAAAA TGTTCCAGCA ACACGACGGG TTGCGGTGGT AATTGCACAA CGGAATGGAA TTATTATGCA TATGGGTTTA CCTTCGGGAA ACAGCCAGAG GTGTTGTGGA ACAATGGGAC TGCTAAGGCA CTCCCACCAG GTATTTTCTT GATTTGTGGG GACAGGGCTT GGCAAGGCAT CCCGCGTAAT GCCTTGGGAG GGCCCTGTTA TCTAGGACAA TTGACTATGC TCTCTCCTAA CTTTACCACC TGGATAGCGT ATGGGCCGAA CATTACGGGT CACCGCCGTA GCAGGCGCTC GCTGAGTCGT CTCTCGCCTG ACTGCGGTGA TGAGCTACAG CTATGGAGTG TGACAGCCCG GATATTTGCT TCTTTCTTTG CTCCTGGTAT AGCAGCAGCA CAGGCCTTAA AGGAGATCGA ACGATTGGCA TGTTGGTCGG TTAAGCAAGC GAATTTAACA TCATTAATAT TGAATGCGAT GCTGGAGGAC ACGAGCAGCA TCCGGCACGC AGTGTTGCAG AATCGAGCAG CCATCGATTT CTTACTCCTG GCGCAGGGAC ACGGGTGTCA AGACGTGGAA GGGATGTGTT GCTTCAATCT CAGCGATCAC AGTGAGTCCA TTCACAAGGC GCTCCAAGCC ATGAAGGAAC ATACAGAGAA GATACGGGTG GAAGATGATC CCATAGGGGA CTGGTTTACG CGCACGTTTG GTGATCTAGG AAGGTGGCTC GCGAAAGGTG TTAAGACGCT ACTGTTTGCC TTGCTTGTCA TAGCCTGTCT ATTAGCTATC ATTCCATGTT TAATCAAGTG CTTTCAGGAT TGTCTATTGA GAACAATGAA TCAGTTTATG GATGAACGCA TAAAATATCA TAGAATTAGG GAGCAGCTGT AGGTTCCGAA CGCGATGTGA CGGGAGCTAT CGGCATAGGG AGGGGGAGAT GTTGTAGGCG TAGCGAGGGA AACGAGGTGT GTTGTAGGCG TAGCGAGGGA AACGAGGTGT GACGCGTGCA GGTTCCTATG CCACCTGTGT GTTATGCCAC CTGTGTGTGC CAAGTGTAAC TTCGTGATTG GAGGAAACAC TTGTATTTAA ACACGTAGCC TATAGCAATA AACGCCATTT GCCTCACTTA CTCCTGGGGT CTGGGTGAGC ATCTGGCCCC GACCTGGTAA AGGGTCGGTT TCGCCCAGCA GTAAGCCCTA CATGTGGACA GAGGACGAAC ACCGGAAGAG CGAACGGAGA CTACATGCAA CAGGAACAGG GCTGGGCCCT CAACTCTGCT TGAAGCAGAA GGAGGCGTCT GC 
Length4302
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.73205 Virus0054
2.44949 Virus1565
3 Virus0009
4 Virus2403
4.47214 Virus1745
5.91608 Virus0879
6 Virus0949
6.32456 Ahg331182 Major facilitator superfamily protein
6.9282 Virus3168
6.9282 Virus0878
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression