Detail



ID : Virus2178

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionSclerotinia_sclerotiorum_partitivirus_S|plants|dsRNA
Sequence
AGATTAATTA TCTTAGTCCA CTTTCTAAGT TCAACGAAAA TTAAATCAAA AAGCTCTTAA CCACACAGAT CTTTTAAAAC TAACAATGCC TGCCCTTAAC CTACGATACC TTTTCTCGAT CTCTCGATCT GAGATGAAGA AGATTCGCTC TTCTCACACG AAGGTCTCAC CACGTGAAGA AGCAACTCGC TTCTCAATTT TAAAGCACGC TATTCTCAAG CACGGTTCAG TCGGCCTTCT CAATCAAGTC CTTCTCGGTA AACGTCGTTC TGACGCTTCT GATGAACGTC TAATTCAAGA CTTTCATGAA TTCGAACAAC CTGTTCACCC TGTGCCACGA GACAAACACT ACCTACGCGC ACTACGAGTC ACTGAAAAGC TGATGAAACC AGCAAAGACT CTACACCCGA TATCTTTCCC TGATCTAAGG TACTATCCTT GGACAAAGAA CGTATCTGCT GAGGCTCCGT ATAACTTCGA AAAGAAGTAC GAAGAACTAC TCAGAGATAA ACAACGTCTG GGAGAAATCG AAACCGCCAC TGCCACCTTC CACAATCTAG AAGATGAAAT CTTCGAAGAT AACCGCTATC TTATTCACAA GATAAAAGAA GGAGACTCCC AATTTTGGGA TAAAGACGGA AAACCGCGCC CTTACTATCA CACCACCCTA CACGCAAGAG CACATGTTGT AGGACACGAA GACGCCGATA AAATTCGAGC TGTTTTTGGA GTTCCAAAGC TATTATTAAT GGCTGAAAAC ATGTTCATCT GGCCACTACA AGCCTACTAT CTCAACCAGG ATACGACCAA ACATCACCTA CTCTGGGGAA ACGAGATAAT GAAAGGCGGC TGGAAGAAAC TCTGGGGACA ACTTCAAAAT GGAAGAATCT CTAGAACCAT ACTCTCTCTT GACTGGTCTG AGTTCGATAA ACGAGCTCTA CACGAAGTGA TAGATGACGT CCACTCCATG TGGAAATCTT GGTTCGACTT CACTCACTAT GAGCCGACCA TTTTCTACGA AAAAGGAGAG ATTCCGGAAC CACACCGTCG AATCGAAAAC CTCTGGATAT GGATGACCGA CATGGTCAAA CACTATCCCA TCCTCCAACC GGATGGAAAG GTTTATCAAT GGACAAGAAA CGGAATTGCA TCTGGATTCC AACAGACGCA GCTCCTCGAT TCATTCGTTA ATATGATTAT GCTTTTAACA GTACTATCAG CGAACGGAAT CAACATTGAA CATCCTGACT TTTGGATCAA AGTTCAAGGC GATGACTCAC TCATTTCAAT CGTCGAACGC AGATTTCAAA TGTTCGGAAT TTCATACCTA GATACACTAG CAGACCTCGC CAGCTACTAC TTCAACGCAA AACTCTCTGT GAAGAAAAGC TTCATCTCTG ACACTCCTCA AGGACAATAC GTACTTGGTT ACTTCAACCA TTACGGTATA CCCTATCGTT TAGATGATGA TCTACTTTCT CACCTTGTGT TCCCTGAACG TCCTCAACGA CTTGAAGAAA CCGCCGCATC ATGCGTCGGC ATAGCTATGG CCTCCATGGG CTGTTCCAAA GTGGTCTATT CCATTTGTGA CGATGCATAC ACATTCATTA CCAAAACACT GCGACGACCT GCGAAAGCTG GGTCCCTATT TTGGCTTGAA CGTGCATTCG GTTACGAAAT GCCAAACATC GCAAAGATGC CAACCTTTGA AGAATGTCTG TACGCTAGCT ACGACATCCC TGTTCGAACT GAGAACATGA AACAAAGATT GTGGCCTACC AATGCGAAAG CCAAGAACGG ATTCTACTTT CTCCGTCACT TATGTTGAGC CGAAAGCTCG GTAAGTTATA TAATTGAAAA AAAAAAAAAA AAAAAGATTA ATTATCTTAG TCTACTTTCT AAGTTCAACG AAAATCAATC AAAAAGCTTT TAACCACACA AATCTTTTAA AACTAACTCT CTACTCAAGA TGTCTTCCCG CTCCGCTCGC AAGGTCTCCA CTCAGGAGAA AACCTCCTCT CAGTCTGGAA AGAACCGTGC CTCCAAGAAG TCTGGAAAGA AATCTGCCCC CCCCGAGTAT TCTGTCGATA CTCCATCCGA ACAATCGGAT GTTGAATCCG ACATCCTCTC CGAACTCGAA GTCTCTGACG CCGATGACGC CTCCCGTCCC GTCCCCGCTT CAAAGTCGAA GAAAGGTACA ACACGCAACA AGAAGAAGGA AAAATCTGTC GCCTCCTCCG CTGGATCATC AATCCCACCC TACATGATGA TGCTCACCGC CCTCAACTTT TTTTCTCTCA CCGAAATCGA ACATGTCACC ATCTCAACCT ATACTCCAAG CTGTTGGTCG ATGTACGCCG TCCTCGACGC TATGCATGAT CTCGTTGGTG ATAACGCTTC TCTTCGTCGT TTCTGTCCCT ACTATCACGT CGCCCTGTCC AATATTTACT ATGGTATTAT CTTCATCATT CAAGTCCTCC GTGCCAATCA AGTCGCCAAC AATCTCTCTC AAGCTGATTT TCAGTTTCTG CGTTTTTTTG AGTCGAATTT TGCTCTCGAA GAACTCCCTG TCGCCGGTCC CCTCGTTCTC TTTTTCCAGA ACCTCGCCGC TTTCAAACCT GATGGAAATC GTTTTAACTG GGTTGTTCCT CACTACAACA ACTACGGTCC CGCAAACGGT GCTAATTCAC CCCGTGTGAA CGCACAATCT ACCGCACTTC CCCAACTACC TCAGATGATC TCACTCCTTA ATCTCTTTGG TGCTTCCAAC GCTGCCCTCC TTACAGCTAT GGATACCGCA GGACAATGGG AACCATTCAC TTTCGCCGCT GGTGGAACCA TCGCTGGTTT CGCTTATGGT GCTGGATTTG CTACTGATGC TGCTGCATCG GACCAAACCC TTCGCGCCCC AGGCATTAAC GTTCCTTGGC AACATGACAC CGCCATCCAT AGGAAACTCG TTCCTATCAG TCGAAGAATG AGCGTTCCAA CAATGAACGG TGCTAAAGAT TCCCCACGCA CTTACTGTGG CCTAGACGGT CAATTTCACT GGTTTCACAA AGCCATTGGA GCTGTCAGTC AAGAAGCTAA GTATTTCGCT GGATCTACTA CACTCGCTAA TATCAATCCT TCAACCGGTC CTTCCGCCGT CGTTGAAACT ACTGTCGCTG TGCCCGCCGC TGCTATTCCT CAAGCAACCG CCTGGTATGA AGGTTATCCC TTCAATCTTA ACCTAACTGT TAACACTCGC GTCCGTTCCA TCTCTGAAAC AGATGTAAAG ATTGGTACCT TCGCTGCTAC TTGTAATATT ATTACAGGTG GAAACTTCAC CCGCTGGAAC GGTTCGTCCG TTTTCGCTGG CGATTTTTTC GTCGCTGCAA CGAATCCTAT TAACTTCGAA AATCCAACCG AAGTTAACGC AATCGCTATG GCTCAACCAA CCATGACGCT TAGCCTCTAC CGCCCTAAAG GTGGAGAAGC TAACTCTGAT GATTAGCCAT CATCTGAAGA CGAGATGAAA AGGTCAGTTG TTTTAACAAC AACCTTCTCT TCAAGATTCT CGATCTTTAA GTTCATCCGA AAGATGCTCT GCTTTTGTTT TTATTTGAAT TTGTTTATTT TTCTCAAATT CCTTTCACTT TTCATTTAAC TAAATTGAAA TATAAGAAAT AAAAAAAAAA AAAAAAAAAA AAATTTAAAA AAAAATAAAA CTACAAAAAA AAAGAA 
Length3726
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Virus1575
6.9282 Ahg473181 Haloacid dehalogenase-like hydrolase (HAD) superfamily protein
11.8322 Ahg916105 endoplasmic reticulum retention defective 2B
11.8322 Virus1895
12.2474 Ahg931291
15.7162 Ahg944655
17.4929 Virus0854
17.4929 Ahg332870 Integrase-type DNA-binding superfamily protein
17.4929 Ahg908810
20.4939 Virus1578
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression