Detail



ID : Virus2180

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionSouthern_tomato_virus|plants|dsRNA
Sequence
GATAAATTTA GTAAGCTACC TAGCGGAATT AAGAACTTTC ACAAAAGGGT GAGGTCATTC ACGATTTACT GTGAAACATC CAGTGAGAGT CAGATTTCTC GTCGTTGCTT CCGTTGCCTC AGTTTAGATA TTCCAATATG GCTGGTGTCG GAGGTTCCGC GGCGGGGCGT GTTCCAAACG CTGCCAACGT TCCTCTTACG GCGAAGGAGA AGGAGAGGAC AGTGATGAGG GAGATAGTTG AGATAGGGGA GACCTTCGTC GAGTTGGGTA TCGACAAGCG CTACTTTCAG AGAACAACTT ACGTCTCCCA CATGCTACTA CCTAATCAGT ACTTCAAGTT GCTCAAGCAG TTCAAAGGGA AGACTGCTGA GGAGTTAGAT TTAGCGTTGG GGGCCGCCGT CGCTCATGGA GTGTTGAGGA GCATGCGGGG CATAACTTTC AAGAAGTTCT TTGACTTCTT GAACTGGGTT AAGACGAAGG AGGGAAAGGA TGCACTGGGC GAGACGATGT ATGCTCAGAA GTTGGAGCAG AAGGGGAGGG GTGATTTTAG TATTGCTGAG GTGGCGCTGC TGCATTGCTT TGAGACTCAG AGGAATGACA TGTTAAGGGA TGAGAAAGAC GTGCGTCTCA AAGCCGAGGA GGAGATCGCT GATCTGCAGC GTAAGATTGT CAAGCGAAGA GAGAAGCTCG AGGAGGACTT GATCGCAACC AAGTCCAATT ATGAGCCTGT TAGCCGGTAT GTGGGGTTGA GTGACTACGA GTTGAACTGC AAGTGTTGGT CTCTTTACCA GCAGTTCAAC CCTGATAAGG TGACAGCAGG AGCGAAGCCT ACTAGGAAGC AAGTCAAGGA GGCCTTCGAC ATGTACGCGG AATTCGTCGC CAAGACGAAT AGGTTAGAGT TTTTGAAGCA CGGGAATGTG AAGGATGAGC TCCAGGCCTT CATTAATGCC AAGATATTGG GTTATGAGCA ATTAGGAGAT AAGGGGAAGA GTCGTTATCT TAGGCGTCAG CTGGCAGCAA TGGGTGTTGA GATGGATCAT GAAGTGGAAT CAGAGGACGA GGAAGAGGCT GCTGAAGAAC CTGCCGGTGG GGAAGCTGAG GAGGGGGAAG GAGATGACCC CTTGCAGGCC ACTGTCGGAG ATAATCCCGA TGGAGAGGCT AGAGGAGAAG AGGACACTGC AGTACAAGTT GCCTCCCCAG CTGTCACGCG CAACAGAGGT AGAGGCAGAG GCCGTGTCAC TCCTCTATCC CAACGCAAGG ATAGAGGTTG AGGTCCGCCC TATTGGGCGG GACACTAGGG CTATTCCATT CTCGCGGTCA CGGTGGGAGG TGGGAGTCCG TAAGGTTATC GGAGGGGGGG AAGTCTTGAA TTGGGATATT GATGGTAACA AGTACAGGGG TGGTGGTTGT TTCGCTGATG CAATCAAACT CCTTGCTGGT GCTACTCAAC GTCCCCCCCA AAGATTACTG GAAGACTGTT ACACAATCAC TACAGCGCGG GAGGCCCTAG GGTTACCTTC AGATCTGGCG GTCCCGAGTG GAAAGGGAAG TTGCCATGTT AGGAATTACA ATGATGATGC TACAAGTGGG CCGTTTCTTT GGTCTTTCGG AATAAAGAAG AAGTATGGGT TAGATAAGCT TTTGCAGAGT CTGATGGAGG ATATCTACTG TCATTATTCT ATATCTGAAG CTACTGATAG GGCGTTGCCA TATTTTGCTG CAAGGGTGGG GTTCCGGTCT AAGCTCCTCA CTATGGGTGA GGCGGTTAAG AAGTTTACAG AGTGTGCTCC TATGGGTCGT TGTGTAATGA TGTTGGATGC TCTCGAACAA TTTGCGTCTG CGCCGCTATA TAACGTTCTC TCTAAATATA CTGCGGAGAG ATCAAGAGGG CAGACTTCCT TTAGGAACAC TGTTGTTCGA GCGTCGTCTG ACTGGATGCA TTTTTGGGAT GAGGTGAAAG AGGCAGCTGT CTGTGTAGAA TTGGATTGGA GTAAATTCGA TAGGGAACGT CCTTCCGAAG ACTTGGATTT CATGATTAAG GTGATCTGTT CTTGTTTCAG ACCAAAAGAT GAGGTGGAGG CTAAACTGTT GAGGGGCTAT GGTGTCTGTA TGAGAAGGGC TCTGGTGGAA AGGAGATTGA TAACTGATGA TGGCGGGGTT ATCCATATTG ACGGGATGGT ACCAAGTGGG TCACTCTGGA CTGGATGGTT GGACACGGCT TTAAACATCT TGTATATTAA GTCCGTTCTT CGGTCTATTG ATATATTGGA GGAGGAGGCG GTCCCGAAGT GCGCCGGGGA TGACAATCTA ACGGTCTTCA GTAAGGATCC TGGAGATGAA GTGCTCGAAG AAATGAGGGT TAAGCTGAAT GATTATTTTA GGGCTGGGAT TAAGAAAGAG GACTTCATCA TTACCCGGCC TCCCTTCCAT GTGAGGACTT TCCAGGCGGT CTTCAAGGAA GGAACCGACC TATCGAAGGG GACATCGAAG ATAATGAAGA AGGCTTATTG GCGTGAGTTT GAAGATGAAT TGAGGATCGA CCAGGAGAAG GGCTTGTCAC ATAGGTGGGA GTACAGGTTT AAAGGGGCTC CCAAATTTCT TTCCTGTTAT TGGTTAGAGG ATGGAAGGCC CATAAGGCCA TCTCACGAGA ACTTGGAGAA GCTGCTCTAT CCAGAAGGGG TTCATGCAAA TATTGACGAT TATATCGCAG CAGTTTTATC CATGGTTGTA GACAATCCAT TCAATCACCA CAATATTAAC CATCTCAAGC ACAGATACAT CATAGCCAAT CAGGTTAAGA GGCTGTCAGC AGCAGGCGGG AGATGCGAGG ACATCCTCCG ATTGGCGAGG ATTAGGGAAC GTGAAGATGA AGAGGTACCT GTCCCACAAA TTGCTGTATG GCGCAGGGTG AAGGAATATG TCGATTTGGA CAGCTACGAG CCAGCCAAGT ACTACATCCA GGATTTCAAC GCATTTGTCT CAGGCGTCAC CTCCCTATAT GCCAGGTCTT CCACAGGCGG TCTTGATGCA TACAAGGTCA TGGATCTGAT CAGGGGTAAT GCTACAATCG GAAGAGGACA GTGGGGTAAT GACGTCATGG ATTGGATCAG ATTCGTTCGG GACCATCCAG CAACTAAGTA CCTCAAAGGA GCGAAACGAT TCAGGGAACA GCATAATCAA GAACCTACGA CAGCCAAACC ATCGAAGGAT GCGAGACGAG CCATCAAGTT ACTGCGTAAT AGTCTCATCA ATGAGGCCTA CGCCGACTCC AACAGCTTTG CCATTTCCAT ATCCGAACGT CTGAGACGGA AGAAGCCAAC TAGATAGGAT TTAATTTTAT GTTTTGTTAT TTATATCTGA CTCTCATTGT AAATCTACTT TATTAAAGAT GTCGCACTCG GCAGTTCTTA ATGCTGTTAT TAGAGTAGCG CGTCTTC 
Length3437
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.82843 Virus0771
2.82843 Ahg925284 Protein of unknown function (DUF784)
2.82843 Ahg924435 Protein of unknown function (DUF784)
2.82843 Ahg494529
4.24264 Ahg952027 C2 domain-containing protein
5.09902 Ahg907898 ribulose-bisphosphate carboxylases
5.47723 Virus1896
5.91608 Ahg946896 Endoplasmic reticulum vesicle transporter protein
5.91608 Ahg950830 Endoplasmic reticulum vesicle transporter protein
7 Virus3455
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression