Detail



ID : Virus2953

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionBeet_mosaic_virus|plants|ssRNA
Sequence
AAATTAAAAC ATCTCAATAC AACACATGCA AAAACATACA AACAAATTAA CAAACTCTCA AATTCAGAGC ATTTCACAAC AATTCGAACA GTTTACTTGA ACTTCATATC TTACACACTA CCACTAGATA TTTACCACAG TCCAGGAAGT TGCAATTTTC TTAAAATGGC AACCATGATG CACTTTGGTC AATTCCCAAG TAACATTCCA CTTAGAGCAG CTACATGCTG TACAAAAGTA CATAGTACTT TAGTTACAAA AGAAATGATG GCCTCCTCCG TGAAGCCAGC TGAGAGCAGT TCTGTTGCTC GACCCATCAT ATACTCTTCT GCAGCCACTG ATGGCTACGA GAAAGCTCAA CGAGCTTTTG AAGCATCTTT CAGAGAGAAA TACTCTGGTA AATTGGAAGC CATGAAATAT GGCAAGATGG TCAAGAAAGG TGGTTTGACG TATGTCAAAC GCGCAGGTCC CCAAGCAATT GCGAAGGGCA TTGAGATGGA TGCTGCGATT GAGAAATTCA ATACAGCATT CAATGCTGGA GAATTAGAAA ATGTCACACT GGAAGGTGAC ATTACAGCGG GAATTTCTGT TGCCCGTGGT GAATCTGTAT GGCTCAGAAG TGTGTTCTGG AGCCGCTCCC TTAAGAAACA GGCGAGGAAG AAAACCCCGA AGCTTGTCGC GAAATCCGAC TTTGATGATT TATTCAACAA AGTCTTGAAA GTAGCCTCAC TCGGGAATAT CCCTGTTGAA ATTGTTGGAA AGAAGGCCAA CAAAATTCTC AGATGTGGAT ACAGAAGAGT CAACACCTCA ACCATTCCAT ATTTCCATTT ACCTCACCAC AACAGCAATT ACATTTGCAG AGAGCTACAT CCACAACGTG TTCGTTGGCT TGTTCCTCTC CTTGTGCGTC ATAGGAAAAT TAGAGACCAA TTTAGTGATT CCATGATTGC AAGAGGTTGG AGTGGTTTGA TTCTACCTAA GTATATTGCC TCAACATGTG GACGACGCTA TGACGAGGTG ATAGTAAGAG GGAGACTTTA CGGAAGAGTG GAGGATGCTC GAACAAAATT ACCCGCAGGC GATGTTGGTA GAACTATGCA CTATAGTAGT GGAGAGGAAA GATTCTTCGC TGGTTGGAAA GAGGGATTTG AGAAGCTTGT TCCAGCCCAG AAGGAGCATA TCTGCAAGAT AGTACAGGAC AACAAGTTTT GTGGAAAATT GGCGGCGTCG ATCGTACAAA TTGCTTTTCC ATGTCACAAA ATGGCTTGTG ATGTTTGTAG AAACAAGTTC AATGAGATGA CCCCAGAGGC GTATTCTGAG CTGATCGACA AACACATTGA TCAACGGATG AACGAAATCA ATGAAGCGAT TGTTCGATTT CCAGGTTTGA AACAAGTTGT TTCGAACTTC AGGAGTAAAC ACATCGCTAG CACCAACATA AAAGACAATC TGGAGGTAGC GAAGCTAACA CAAGGGCATA AAGCAAATCA GATGATGCAG CTTGCTAGGA TCAATTCCAT TCTGATCAAA GGAAATACAG CAACACCTAG CGAGATAAGT GACGCTAGTG GCTTGTTATT GGAAATAACA AGATGGTTCA ATAACCATTT GAGCGTGATC GATAAAGGCT CCCTACGAGC CTTTAGAAAC AAACGTTCAA GCAAAGCACT AGTCAATCCA TCGCTTTTGT GTGACAACCA AAGGGATAAG AATGGAAACT TCATTTGGGG TGAGAGAGGA TATCACTCAA AGCGTTTCTT CGCTAGTCAC TTCGATGAAG TAACTCCTGG AGATGGGTAC AAGGAGTATA TAATCCGCAA AGGACCACAG GGCCAAAGGA AGCTTGCAAT TGGCAACTTG ATCGTCTCAT TTGACTTAGA GAAAACACGA CAAGCACTCA AGGGAGAAGA GGTTGAAAAA CTTCCTTTGA GCAATTCATG CGTCAGTAAA CGTAACGGAA ATTATGTTTA CACTAGCTGT TGTGTCACTC TAGATGACGG AACCCCATTG TATTCCAACA TTAAGAACCC CACAAAGAGA CACTTGGTTG TTGGAACAAC TGGAGATCCG AAGATAGTTG ACCTACCTGC AACAGACACA GACAAGATGT ACATAGCAAA AGAGGGATAT TGCTATTTGA ATATCTTCTT AGCTATGCTC ATCAATGTCA ACGAAAATGA AGCAAAGGCC TTCACAAAAA TGGTTCGTGA CATTATTATC CCAATGCTTG GAACATGGCC AACTATGCAA GATCTTGCAA CAGCATGTTT CATGATGACA GCTTTCTTTC CAGAGACAAG TAGTGCGGAA CTGCCGAGGA TACTAGTTGA TCACACAAAC CAGACAATGC ATGTCATTGA TTCATTTGGT TCATTAACAA CTGGGTACCA CGTACTCAAG GCAGGAACAG CCGCTCAACT TATCGATTTT GCTTCAACAG AGCTTGAAGG AGAGATGAAG TGGTACAGAG TTGGCGGACA TGGACTACCC GTGAAAGAGA AGATGATTAG CGCATTGATC ACAAGTATTT TCAGGCCCAA GAAATTGGTG TACTTGATAG AGGAGGATCC ATATGTTTTA ATCATGGCTA TGTGTTCACC ACGCTTGATT ATTAGTTTAT TCAACAATGG TGCCTTAGAA CTAGCAGCAA AACATTGGAT ATCACGTGAT AAAAATGTCA GTGCGATTTT CGCAATGCTT ATGGACTTAT CTACGGAGAT GTCTAAAGCA GAACTTCTCA TTGAGCAACA TCGCATGATA AATGAATGCG CAAAAAGAGT CCATGACACT CAGAACTATC TCGACGAAGT GGGCCCACAC CAGCAAGAAG TTCGCACTTT CCTGGCTTTA ATTTCGGATG AATTGGAAGC GGACAAGGAG TTGCACAAGA CGGGATTTGC AAATTTCAGT GAGCGATTTC ATTCTCTCAC GGAAAAAATG TATGTGGACG CGTTAGAAGA GGAATGGCGA GGTTTAAGCT TGTTAGACAG ATTCTCTTAT GCCACCTTTG TGTACAAGCA CAAACCGCGT TCAACATCCG TTTTGCCCCC GAAAAAGTCA GAAGATATCG ATGCCAAATT CGTCATATCG CCCAGCTGGT TCGTTGGAAA GACGAAGGAA CACCTAAGTG GAGGCCGGAA GTATGTTACA AGCCAGATCA CCCAATTCAC GAGTTACATC AAGCGCGCTA CGCTCGACAG AGCCATGCGC ATCATGTGCA GCTGCCTAAA GGACCTCGCA TACTTTATGA ATGTTGCCTT GGTGACTCAT TTGCTCATTA GCATGATTGC AGCAGTGTAT AACATGCTAA ACGACCATAG AATTGCAAAG CGTCGCTTGT ATATACTTGA GATGCAGGAA ACAAACACTG CAATTTGGCA TCTGTATGAC ACATGGAAGA CTGTCAATCA AAGGGATCCA ACTCATGAGG AGTTCAGGAA GTATGTTGCC AAAGTTAACA AGAACCTTTT AAGGCACTTA CCCGAGGAGG AAGACAAAGC AGAGGTTGAA TATCAAGCAA ACAAAGTTTA CGAGAAGAAG CTAGAGAAAG CAGTCGCCCT AATGGCTTTG TTTACTATGA TATTCGATAC AGAGAAGAGC GGGGCAGTGT TCAGTATTTT ACGCAACATC AAATCAGTGT TCAGCACACT TGGAGAAGAA GTGAAATATC AGAGTCTTGA TGAGATACAA TCGATTGAAG ATGAGAAGAA GCTCACAATT GACTTTGATC TAGACACTGA AATCACGGCT GAGCACACCA CGATGGATGT ACAATTTGAG AAGTGGTGGG ACAAGCAATT GAGCCAGAAC AGAGTTGTTC CACATTACAG AGTGGGAGGA ACGTTCATCG AGTTCACGAG ACATACAGCA GCTAGTGTTT GTAACACTAT TTGTGCAAGC TCTGAACAGG AGTTCGTTGT TCGTGGCGCG GTTGGTTCAG GGAAATCTAC GGGTTTGCCG TCGCATTTGA GTCGAAAAGG GCGAGTTTTG TTGCTCGAAC CAACACGACC ACTTGCAGAG AACGTGTGCA AACAACTTCG CAAGGAACCA TTCCACTTAT CCCCAACACT CAGAATGCGA GGATTGACAA CATTTGGCTC AAGCAACATA AGTGTGATGA CTAGTGGTTA TGCTCTTCAC TTTCACGCAA ACAATCCACA GAGACTTGAA GAGTTTGACT TCATAATGAT TGATGAAAGC CATACAATGG ATTCTTCCAC TATGGCTTTT TATTGTCTCC TCCGTGAATA TGAATTCAAG GGTAAGATAC TCAAAGTCTC GGCAACACCA CCAGGAAGAG AGTGTGAATT CAAGACACAG CACGACGTTC TTATCAAGAT TGAAGAATCC TTGTCATACA ACTCCTTTGT CACAGCTCAA GGCACTGGTT CGAATGCTGA TGTCGTCCAG AATGGTGACA ACATTCTTGT ATATGTTCCA AGCTATAACG ATGTTGATCA ACTTAGCAAG GGGCTAATGG AGAAGGGCCA CCTGGTCACA AAGGTAGATG GACGCACAAT GAAGATGGGC AATGTCGAAA TCCCAACGAA AGGAACTTCA TCAAAGAAGC ATTTCATAGT TGCAACAAAC ATCATTGAGA ATGGCGTGAC ACTGGACATC GACGTCGTTG TAGATTTTGG CTTGAAAGTG GTTGCCGAGT TGGATTCTGA CTCACGGTGC ATGCGCTACA AGAAAGTGTC AATTAGCTAT GGTGAAAGAC TCCAGCGACT TGGCAGAGTA GGACGAGTGA AACAGGGCAC AGCACTTCGC ATTGGTCACA CTGAGACAGG CATGACTGAG ATCCCTGTCG CAATTGCAAC TGAAGCGGCC TTTATTTGCT TTGCTTACAA CTTGCCAGTG ATGACACACA ATGTCACATC AAGCCTCCTT TCGCGATGCA CGAACAGACA AGCCAGAACC ATGATGCAAT ATGAACTATC TCCATTCTTT ATGGTTGAAC TAGTTCATTT TAATGGCTGT GTGCACCCAC AAATAGAAAG CAAATTAAAG GCATACAAGT TGCGAGATTC TGAAACACAG CTGAGCACAC TCGCTATTCC GAATAGCGGA ACATCCCGAT GGAAGACGGT TGGAGAATAC AAGAAGCTGG GAGTTCGTAT TGAAGCCGAC GATAATGTTC GCGTTCCGTT TGCAGCAAAC GGAGTTCCGG ATAGGTTATA TGCTGATTTA TGGGAGACCA TTCAGCAGCA TAAATCTGAT GCGGGTTTCG GACGGCTCAC AAGTGCTTGC GCGAGTAAGA TATCATACAC TCTGACAACC CAGCCAAACG CAATTCCTCG CACTTTGGCA ATAATTGAGC ATTTGTTAAG AGAAGAGCAG CAAAAGAAAG CCTACTTTGA ATCTCTCAAT GATACGCTCT GTGCGACAAG CTTCTCGTTA GCAGGTATGG TCAACAACAT ACGGAGAAGA TATTTAAAGG ATCATTCAGC GCATAATATC AACGTACTTC AGAATGCTAA GTCACAGCTT AATGAATTTA ATTCAAAAGC TATTGACCCA GAGAGAGTTG GTGACATTAT GGGTTATGGA GTACTGGACA CTGTTCAGTA TCAAAGCGCA ACAGATGTTC AAAAGCGCCT GAAACTGAAA GGTCGATGGA ATGGTTCACT AGCTGCAACG GATCTTTTGA TAGCAGGAGC CGTATTTGCT GGTGGTTGCT GGATGCTATG GGAGTATACT AAGAGTGGCA ACGAGATTGT GCAATACCAA GGGAAGAGGC GCCAGATGCA GAAGCTCAAA TTCAGGAATG CTAGAGACAA CAAGGTTGGG CGCGAAGTTT ATGGTGATGA TGGAACAATT GAACATTTTT TCGGAGCAGC CTACACTGAA AGGGGCAAAA GGAAGGGGAA CAATAGCACC AAGGGAATGG GAACGAAGAC GAGACGCTTC GTGCACATGT ATGGGTTTGA TCCCACAGAA TATTCATTTG TGCGGTTCGT TGACCCATTG ACTGGCTATT CGAAAGATGA AAGCGTGCAA ACGGACATTT CCTTAGTGCA AAGTGAGATA GGCGAGTACA GGCAGAAGTG TATGGAGGAT GATGACGAGT TGATCGATTT CATCAAACAA AAACCTGGAA TACAAGCTTA TTTCATGAAG AATGGTTCAG ATAAAGCTTT GCAAGTCGAT CTCACACCTC ATATTCCATT ATTATCATGT GCCAAGACTG CGACTATTGC TGGTTTCCCT GAGCGAGAAT CTGAGTTACG ACAAACTGGA ACTCCAATTG TTGTGAACAA GAATGTGGTG CCAGGCGAAC ACAAGGAGGT TGTCAGGGAA GAGGGAAAAT CCATAGTCAA AGGATTGCGG AATTATAATC CAATCTCTTC AGTTGTTTGC CGTTTGACCA ATGACTCGAA TGGGAATGCG CAAACCCTTT ACGGGGTTGG TTTTGGTCCA CTGATCATCA CGAATAGTCA TTTGTTCAAG ATGAACAATG GCACATTATT CGTCAGATCA CATCAAGGTG AGTTTACCGT GCAGAACACA ACGCAGCTTC AAATCTATCA TGTGAAGGAC AAAGACATGA TTCTGATTCG TATGCCGAAA GATTTCCCAC CATTTCCAAT GAAACTGAAG TTTAGGGCGC CTCATTCCGA AGAGAGAGCT TGCTTGGTTG GGTCACGTTT TCAACAGAAG AGCCTCTCAA GCGAAGTTTC TGATTCAACC CTGATAAGGC CCACAGACTC AGGAAGTGGA TATTGGAAGC ATTGGGTCTC AACAAAGGAA GGTGATTGTG GCTTACCTAT GGTCGCCTTA AAAGACGGTA GTTTGATAGG GATTCATGGT CTAACGAGTG TGCGGTCAGA ATTGAACTAC TTTGTTCCCT TCACTGACGA CTTTCAATCA AAGTATCTTT CAAACATAGA GTCACTTGAA TGGGTGAAGC ATTGGAGGCA TACACCAGAC AAGGTTGCAT GGAATGGAAT GACACTGCGA GAAAACGGTC CAGCATCAGA ATTTTCAGTT AGCAAGCTCA TAGCAGATCT CACACATGGT TATGTTGATG AGGTTGTTGA GCAAGGATAC AGTTCAAAAT GGGTTGCTAA TCGTCTTGAC GGCAATCTCA AGGCTGTGGC TAGCTCTTCT AGTCAGCTCG TAACGAAGCA TGTAGTGAAG GGGCCATGCG TTTTGTTCCA AGAATTCCTC GCAACACATG AAGAAGCAGC TAGATATTTC GTGCCGCGCA TGGGAGAGTA TGGTCCAAGC CGTCTCAATA AGGAAGCCTT CCTCAAGGAT TTCTTGAAAT ATGCTGGTCC AATAACTGTA GGTGTTGTTA ACACCAACAG TTTTGAGGAT GCAGTTGCAA GTGTCATCAA CATGCTAGAG GATCTGGACT ACGGTGAATG TGCTTACGTC ACTGACCCTG ATTCAATATT CGATTCCCTC AACATGAAAG CAGCCGTTGG AGCTTTATAC AAAGGGAAGA AGAAAGAATA CTTTGAACAG CTGAACACTA CAGAGCGTGA AGATTTGCTA CGTCTCAGCT GTGAGCGCTT GTACGAAGGC AAGATGGGCG TGTGGAACGG ATCTCTCAAA GCTGAACTGC GCCCCAAGGA AAAGCTAGAA CAGAATAAGA CTCGCACATT TACTGCAGCA CCTATTGATA CTTTGCTTGG CGGGAAAGTT TGTGTTGATG ACTTCAACAA CAGGTTTTAC TCGTTGAACC TCAAGGGTCC ATGGTCTGTC GGGATGACGA AGTTTTATGG GGGATGGAAT GAACTACTAC AGAAACTTCC AGATGGTTGG ATTTATTGTG ACGCTGACGG ATCACAATTT GATAGCTCTC TTACACCTTA CCTGATCAAC GCAGTCGTGC AAATAAGAGA GCATTTCATG GAGGATTGGG AAATTGGTAG AACCATGCTT CGGAATTTCT ACACTGAGAT AGTGTACACA CCAATTCTCA CACCGGATGG AACAATAGTG AAGAAGTTCA AGGGGAACAA CAGCGGCCAA CCATCAACAG TTGTTGATAA CACTCTCATG GTCATCCTTG CAATGCATTA TGCAATGCAT CAACAATGCT GGAAGGAAGA GGAGATGAAA GAGAAGATCC GCTTTTTCGC AAATGGTGAC GACCTGCTAA TAGCTATATA CCCGAGCAAG GAAAAATTTT TAAATGTGCT CTCAGAGTAC TTCCACGAGC TTGGTCTGAA ATATGATTTT TCTAGCAGAA GCACTGTACG TGAAACTTTG TGGTTTATGT CACACAGGGG GCTTTATCTC GATGATATGT ACATCCCTAA ACTCGAGGAG GAACGCATCG TTTCAATTCT TGAATGGGAC AGGAGCAATG AAGCCACACA TAGGGCTGAA GCCATATGCG CTGCAATGAT CGAAGCATGG GGATACCCAG AACTTTTGAA GTACATTCGT GAGTTTTATC TATGGATGAT GCAGCACGAA TGTTATAGAG ATCTTGTGCG CGATGGGAAA CTGCCATATA TTGCAGAGAC GGCTCTCAGA AAGCTTTATA CTGATAAAAG TGTGGATGAG AATGAGCTCG TTAAGTACTG GAAAGCACTT GCACCAGAAG AGGATGATGG GCCAGACATA GTTACGTACC AGGGGGATGA GAAACCTTCG AAGTCATCTC AACCACAAAG TTCGAGCCCA CAAGTACCAC AACAGGTTGA TGCTGGTGCT AGTTCTCAAG GAAGGGACAA GCAGAGTGTT ATCAAGCATG ATAGCACAAA GAGCAAGGAT GTGGGACAAT CAAGCACTGC CGTTCCGAGA TTGAAGCAGA TTTCGAAAAT GAGGATGCCT GTTAGTAAAG GACGTCAAGT CTTAGCACTT GACCATTTGT TGGATTACAA GCCAGAACAG GTTGACCTTT CAAACACCAG AGCCACAAAG GAACAATTTG ACAATTGGTA TGAAGCAGTC ATGAGAGAGT ACGATGTGTC GGACTCTCAA ATGGGTGTGA TTATGAATGG ACTCATGGTG TGGTGTATTG AGAACGGCAC ATCACCAAAT CTTAGTGGAG ACTGGGTTAT GATGGATGGA GAGGAACAAG TTTCTTTCCC TTTAAAGCCG ATAGTAGAAA ATGCTAAACC ATCTTTTCGG CAAATCATGC ATCACTTTTC TGATGCAGCA GAAGCGTATA TTGAAATGCG CAACAGAGAA AGGCCATACA TGCCTCGTTA TGGCGCTCAG AGAAATCTGA GAGACAAGAC GCTAGCTCGC TATGCATTCG ATTTCTATGA GGTCACTTCA CGAACAACTG ATCGTGCACG TGAAGCTCAT TTCCAAATGA AGGCGGCGGC GTTGGCAAGC GTGTCCAACA AGCTCTTCGG GCTTGATGGG AGCGTAGCCA CCACATCGGA GGATACAGAG AGGCACACAG CCACAGATGT CAACGCTCAC ATGCATCACA TGATGGGCGT TCGACAAGGT TAATTCTGTA CCTCGTTCTA TGAATAGTTA AATATGGTAA CCATTTAAAA GAGTGAGGTT TTACCTCCGT TGCTTATTTC TATTTCGCAT AGTTCCAAAC CACTACCCTC AATAGGCGTC TCACAGTGAG GTTTTACCTC GGAGGATTCT ACGGACGGTA CACAGGTTTA C 
Length9591
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
4.12311 Ahg909265
5.83095 Virus1935
6 Ahg338690 photosystem II reaction center protein B
7.14143 Ahg943750 Regulator of Vps4 activity in the MVB pathway protein
8.7178 Ahg905525
10 Ahg919953
10.9545 Ahg889891
11.4018 Virus3786
11.5326 Ahg352203
13.2665 Ahg358858
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression