Detail



ID : Virus2978

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionBlue_squill_virus_A|plants|ssRNA
Sequence
GCAGCATTGG TGTGCTTGTG TGGTTTTGCG TGAGTCTAAC AATTTCCATC GCCACTTCCA AATTAAAACA ACTCAACAAG ACAATACAAC AAACGAACGC AAACAAACAG CAATTTTCGA ACTCTAAATC AATTTTTCCG CAAACTTGAC ATCATATTCA CAAATTTCTG CACAATCACA GCTTTTGTTA ACTCTGCACT CGTTCGCACT TAGCTCTTAT ATTCACTACT TTAATCGCTT ATATAATTCT CATTAACAAA TGGCAACTAT CATGTTCGGC GATTTCTGCT ACCAGCTCAA CAAGGCAAAC ACTCATGCGA GTTTGCCTGA TCCGGTAACT TGCCACGTGA AACAAGCAGT TACCATCAAG GCTGAACACA TGGCGGCTGC AACGCCAGTG GTTAGGCGGG TTCCATCACA ACCAAGGAAA CTTGGCAGAG ACTTGGTTGC GGAGTATGAC AGAACGATGA ATCTTCTGGA CGCAGCCCTG GAACGGGATG AGAAGTTTCA GACGAAACTT TTATGTGACA AGTATGGAAC GCTGCAAAGG ATGAAGGCGG GGAGGTACGT CATCAAACGT GCCAGTGTGA GGAAAGCTAT GGAGAGTGCT GAAATGGATG CAGCACTGGA AAGGGACCAC GAAGCTTTTC TTCGTGGTGA GTGTGCAACA GAAGCACAAG CGGGATATTG CAAAATCCCG ACTCAATTGC ACACGGGTTG CAATGTTAGT TTTAAGTCTC CGTACTGGAA ACGGAGCGTT AAGGCACCCA GGCACACTCC GAGACGACAA CATGCTTCGA TGAGCGTGTA TGAATTAACT GAGTGGGTGC TCACCTTTGC GGCTAAGACA GGAATCAAAC TTGAGATAAT AGGCAAAGGC AGGCAACATA TAAAGGCACG GTATGTACGT ATGCGGGAGA ACGTTATACC AAAAGTTGAA CTCCCACACG AACGTGGGAT TTTCAAATAC CGCGAAATGG ACTATAATGT GGCCTGGAAA TACCTCATGC GTCTCTGTTC ACATGGGAAG TATAAGGATG TGGTGGATAG CGACATTTGT AGTGGGTGTA GTGGCTTCTG CTTTGATAGA AGGAGCAAAA TCACTACTGA AAACACGGAG CTGCCATATT TTGTGGTAAG GGGCCGTGAG GGCAAGAAAC TGATCAATGC ACTCGACACT GTTTCGAACA TTGAACATAT TCACCACTAT GCGCAGCAAG GAGATTTTCA GTTTTTCAAA GGTTGGAAGA CATCATTTGA TGAAATGGCT CCACACACGG ATGATCATGT ATGCAAAGTT GATATCGACA ATGAACAGTG TGGAAAATTT GCAGCAACAA TCAGCCAAGC TGTTTTTCCT GTCAAGAGGT TATCGTGTTT GCAATGTAGG CACAAATTAC TTGACATGAG TTGGGAAGAA TACAAACAAT TCGTATTGGC GCACATGAGT TGTAGCAAGA ATGCTTGGGA TGAACGGTCA ATATTTCCTG GAAGCAAGGT TATCGAAAAG TTCATTAAGC AAGCAACATA TGAGAATATG AATTTGGAAG TGGCGATGGA AATTGTTAGA CTCACGCAAA ACCACACAAG CACACCAATG CTGCAAATCC AAGACATCAA CAAGGCACTA ATGAAGGGTT CATCAGTGTC TCAAGCTGAA TTAGATAAAG CATTGAAGCA GCTATTAGCA ATGACACAGT GGTGGAAGAA ACACATGACG TTGACGGGTG AGAATTCGTT AGCATCTTTT AGAAATAAGA GGTCAGCGAA AGCTCTACTC AATCCAAGTT TACTCTGTGA CAACCAACTT GACAAGAATG GAAACTTTGT TTGGGGGGAG AGAGGTAGGC ATTCAAAGCG ATTCTTCTCA AATTTCTTTG AAGAAGTGAT ACCATCAGAA GGGTACGCAA AGTATGTGGT AAGGAAAAAT CCCAATGGTC AGCGCGAACT TGCGATTGGT TCTCTCATCG TGCCCATGAA TTTGGATCGA GCACGTATTG CACTTCAAGG GAAGAGTGTG AAGAGAGAAC CACTCACACT TGCATGCACA TCAAAACAGG ATGGGAACTT CGTATACACG TGCTGTTGTG TAACACAGGA TGATGGCAAA CCAGTATATT CTGAACTCAA AAGTCCAACG AAGAGACACC TGGTGGTTGG CACATCAGGA GAACCTAAGT ATATTGATTT GCCAGCAGTG GATGCTGAGA AAATGTACAT TGCAAGGGAA GGATATTGTT ACCTGAACAT TTTCTTAGCA ATGCTTGTAA ATGTCAATGA AGAAGAGGCC AAAGATTTTA CAAAAATGGT ACGTGATGTG ATCATTCCCA TGCTTGGTCA GTGGCCCACC ATGATGGATC TGGCAACTGC GGTGTATATG TTGACAATTT TTCACCCAGA AACACGCAAT GCTGAGCTAC CTAGAATCTT GGTGGATCAT GCAAGCCAAA CCATGCATGT CATTGACTCT TTTGGATCGC TTACAGTTGG ATATCATGTT CTGAAAGCAG GCACAATCAA TCAGTTGATA CAGTTTGCTT CTGATGATCT TCAAGGAGAG ATGAAGTTCT ACAGGGTTGG TGGTGACGCT CAACACAGAG TGCGATGCGA AGCAGCAGTG ATCAAGGGTA TTTTCAAACC CAAGATCATG ATCAAGTTAT TGGAACAGGA TCCCTACATT GTGCTCATGG GTATGATATC TCCATCAATT CTCGTGCACA TGTATAGGTT GAGACATCTT GAGAAGGGCA TTGAGTTGTG GATTAATAAG GACCAAGAGG TCGCAAAGAT CTTCATCATT CTTGAACAAC TCACAAAGAA GGTAGTCACT GTGGACTTGT TGGTGGATCA AATGAGAGCG ATTAGTGAGT CAGCAGCGCA CTTGGTGGAG GTAATAGACA ACTGTGGGCA TAGGTCAGAT GCGTACATGC CAGCTAAGGA TCTTTTGACA GTCATCTTTG AAAGCAACAA TTCAAATAGA GCGTTGAATG AGAATGGGTA TCTCGATCTT AACAACCAAC TCTATAATGA AAGGGAAAAA ATTTACTTAA ATCGTTTAAA GCAGGAATGG AACGATTTAA GTTGGCTTCA AAGATCTTGT GTAACATGGC GCTTGAAAAA GTTTTCACCT TCTATGGAGA GATCTTTGAC AGAGAGAGCT GTAGAAGGAG GCGGAAAATT CTCAAATATC TTTGTGAGTG CGTGCTTCAC CAAAGCGACT ACACACCTCA AAAGCGTAAA AGAGTATACA TATAAGAGGT GTGAGGTTAT CACGACAGCT TTGTGCAAGA AATTTGTTAA CGCAACTTTG AATGTCGTTC GACGCTGTTA CAGTGACATA TTTTACTTGG TCAATGTGGT TTTGATTTTC TCACTGCTCA CGCAAATAAT CGGAACGGCA CGGAATATCA TGGCAGTTGT TCAAAATGAG AGGTTGGTTG CGCATCTGTA CAAACAGAAA GAGGAGGAGG AAACACTCAT CAGCATGTAC ACAATGTATG ATAAAACTGC ACAAAGGTTA CCATCTCTCT CTGAATTCAA AGACTATGTT GAGAAAGTGC GACCTGATTT AGTTGGAAGG TTACAGAGTA TGGTGGGAGA TGTGGATCAC GAGGAAGTCA CCCCACAAGC GAAAACTGCT GTGCAATTAC AGTTCGAGAA GATTATCGCG GTTCTAGCTT TGCTCACAAT GTGCATCGAT GCAGAAAGGA GCGATGCTAT CTTTCGCATT CTGAGTAAAA TTAAAACAGT TTTCACGACT ATGGGTGAGG ATGTGAAGTT GCAGAGTCTT GATGATATTG AGAACCTTGA GGATGATAAG AAACTCACAG TTGATTTTGA TTTGGATACT AGCGCGCAAA CTACAAGTGT GAGTTTTGAT ATCAAATTCG AAGAATGGTG GAATAAGCAA CTTCAACAGA ATCGAGTTGT GCCGCACTAC AGAACGTCTG GTGAATTTTT TGAGTTCACC CGAGAAACGG CAGCTCACGT CGCAAACCAA ATCTCAACAT CAAGTTGCAC AGAGTTTCTG ATTCGTGGAG CAGTTGGTTC AGGAAAATCC ACAGGTTTGC CACACCATTT ATCGAAGAAG GGTAAAGTCT TATTGTTGGA ACCCACAAGA CCGTTGGCTG AAAATGTGAG CAAGCAACTT GCGAAAGATC CATTCTATCA GCAAGTAACG CTTCGGATGA GAGGTCTTAG TGTGTTTGGT TCTAGCAATG TTACCGTGAT GACCAGTGGG TTTGCATTTC ATTATTATGT GAATAACCCA ACGCAGTTGT CGGATTTTGA CTATATTATC ATTGACGAAT GCCACGTTCT TGATAGTGCA ACGATTGCAT TCAATTGTGC ACTGAAAGAA TTTGAATTCG CGGGCAAGTT GTTGAAAGTG TCAGCCACAC CACCTGGGAG AGAGTGTGAG TTCAAAACTC AACACGCAGT TAAGTTGAAA ATTGAAGATC AATTGTCTTT CCAGAACTTT GTACAAGCAC AAGGCACAGG CTCAAATGCA GATATGATTC AGCATGGCTG TAATCTGTTG GTGTATGTAG CGAGCTACAA TGAAGTGGAC ATGTTATCGA AGCTTCTTGT AGATCGTCAT TTCAGAGTGA CAAAGGTTGA TGGCAGGACA ATGCAAATGG GCAATGTTGA GATTGTGACT TGTGGTACTG AAGAGAAACC CCACTTTGTC GTTGCAACAA ACATAATAGA GAATGGGGTG ACGCTGGACA TTGATTGTGT GGTGGATTTT GGTCTGAAGG TTGTTGCATT ATTGGACAGT GAGAATCGGT GCATTCGCTA CAACAAAAAG GCAGTGACGT ATGGCGAGCG AATTCAGAGA CTTGGGAGAG TTGGGAGACA CAAGCCAGGG CATGCGTTGA GGATTGGGTG CACTGAGAAA GGAATTGAGG AAATACCAGA GTTCATTGCC ACAGAAGCAG CTTTCCTGTC ATTTGCGTAT GGTCTGCCCG TTACAACTCA AGGCGTGACG ACGAACATTC TCGCAAACTG TACAGTGAAG CAAGCAAGGA CGGCGCTAAA TTTTGAAATA ACTCCTTTTC TTTCCACACA CTTCATCAAA TATGATGGGA GCATGCATCC TGAGATCCAC AATATTTTAA AAGCGTACAA ATTGAGAGAG TCTCAAATGA CTTTGTGCAA ACTTGCTATA CCATCTCAAT TTGTTAATCA GTGGATTACA GTAAGGGATT ACGATAGGAT GGGCATCAGA CTTCAGTGCG ATGAGAAGAC AAGAGTACCA TTCTATGTAC ATGGAATTAG CGACAAGGTC TACGAAACAT TGTGGCAGAC TGTTTGTAAA TACAAACATG ATGCTGGATT TGGGCGGATC TCAAGTGTTA ATTCCACGAA AATAAGTTAC ACACTCAGCA CTGATCCTAG TGCGATACCC AGAACATTGA CAATCCTGGA TCACCTACTG GCTGAGGAGA TGATGAAGAG GAATCATTTC GAGACAATTG GAGCATCACT GACAGGGTAT TCGTTTTCAC TTGCGGGTAT CGCTGATGGC TTTAGAAAGC GATACTTGCG CGATTATTCA GCTCAGAACA TAGCGACTTT GCAACATGCG AAGGCAATGT TACTTGAGTT TGATTGCAAG AAAGTGGATT TGAATAACCT GCATAACTTG GAAGGAGTGG GAGTGCTGCA CACAGTTAGG TTGCAAAGTA AGAATGAGAT TGCGAAGTTC CTGCAGTTAA AAGGGAAGTG GGATGGTAAG AAGTTCATGA ATGACATATT TGTGGGAATC ATCACACTGA TTGGTGGTGG CTGGTTACTC TGGGAATACT TTTCCAAGAA GTTGCAGGAA CCAGTAACAA CACAAGGGAA AAAGCGACAA ATGCAGAAAC TTAAGTTCAG AGACGCGCGC GACAGAAAGC TTGGCCGCGA AATATATGCC GATGACTATA CAATGGAACA TACGTTTGGT GAGGCATATA CAAAGAAAGG CAAGGTTAAG GGCAGCACGC ACACGAAAGG TATGGGCAGA AAGACAAGGA ACTTCACACA TATCTATGGA GTTGAGCCAG ATAACTATAA CTTCATTAGA TTTGTTGATC CACTGACAGG GCACACGATG GATGAGAATA CAAGAGTGGA TATTCGCATT GTTCAGGAGG AGTTTGGTGA AGTGCGAAAG CAGAAAATAC TTGATGACGA ACTCTCTCGC GAAAGAGTGG TCTCAAATCC AGGAATTCAA GCATACTTTA TAGGGAAAAA CACAGAGGAA GCACTCAAAA TTGATTTGAC ACCACATGTT CCAACATTGT TGTGTCAAAA CAGTAATGCG ATATCCGGTT TTCCAGAGAG GGAGGATGAG TTGAGACAAA CAGGTCCTCC AGTGCATATC AAAGTGAGTG AAGTGCCAGC ATCAAATAAA ATTGTTGAGA CTGAAAGCAA ATCCGTTTAC AGAGGACTCA GGGATTACAA CACCACATCG ACTCTTGTTT GCAAGTTGAG CAATGAGTCA GATGGGCACA TTGAGACACT GTATGGTGTT GGGTATGGCT CTTACATTAT TACTAATGGA CATCTCTTTA GAAGGAACAA TGGGCGCTTG AACATCAAAA CTTGGCATGG TGAGTTCACG ATAGCTAATG CGACGCAGAT TCGCATTCAT TTTATTGAAG GAAAGGACTT GATACTCATC AGAATGCCAA AGGATTTTCC GCCATTTGCC AAGAAGAGTA TATTCCGGAG CCCAAGGAAG GAAGAACGGG TTTGTATCGT TGGAACGAAT TTTCAAGACA AGAGCATGAG AGCAACGATA TCAGAATCAT CAATGATATT GCCGGAAGGG AAGGGATCTT TTTGGATTCA CTGGGTCTCC ACAAAGAATG GTGAGTGTGG TCTGCCGATG GTTTCGACAA CCGATGGGTG CATAGTTGGG ATTCATGGAC TGTCGTCAAA TGAGTCTGAC AAAAATTTCT TTATACCATT TGTCGACAAT TTCGAGAAAG AGTTTTTGTT AAATGCACAA GACTTGTCAT GGGACAAGCA TTGGTTGTGG CAACCAGACA AAATAGCTTG GGGTTCGTTG AAGCTTGTCA CTGAACAACC GCGTGAAGAT TTCAAAATTT CAAAGTTGGT CTCTGATCTT TTTGATGATG AAGTGTGCAC TCAGAGTAAG CAAGAAAGGT GGGTTCTTGA AGGAGTGAGC GGCAATTTAG TGGCATGTGG GAAAATGGAC AGTTCACTGG TCACGAAGCA TGTTATTAAA GGAAAGTGTG GATACTTTGA AGAATACCTT TGCTCGCACC CAAAAGAAAA GGAATTCTTC ACACCGTTGA TGGGGGCATA TCAACCAAGT AAGCTCAACC GGGAAGCGTT CAAGAAAGAT TTCTTCAAGT ATAACAAGCC AATAATCTTG AACGAAGTGA ACTTTCAATC GTTTGAATGC GCAGTCAATG GCGTGAAACA GATGATGATG GGTTTTGGTT TCCGTAGGTG TGTGTTTGTC ACCGATGTGG ATGACATTTT TGATTCACTG AACATGAAAG CGGCAGTAGG GGCTCAGTAC AGAGGGAAAA AGAACGAATA CTTGGCAGAT TTTGATACAC AGGACAAAGA ACGCCTACTA TTTTTAAGTA GTGAGCGCCT CTTTAATGGC GAAAAAGGTA TTTGGAATGG ATCTCTCAAA GCTGAGTTGA GGCCTATCGA AAAGGTGCAA CAAAACAAGA CAAGAACTTT TACAGCGGCA CCGATAGATA CCTTACTTGG AGCAAAGGTT TGTGTTGATG ATTTCAACAA TCAATTCTAT AGCTTTCACT TGGAATGCCC ATGGACGGTT GGTATGACGA AATTTTATGG TGGTTGGGAT AAGCTGATGC GCAAATTACC AGATGGGTGG GTATACTGTC ATGCGGATGG ATCGCAATTT GATAGCTCTC TTACGCCCTT ACTCATTAAC GCAGTTTTGG ATATCCGGTG CTTCTTTATG GAAGATTGGT GGGTTGGGCA AGAGATGTTA GAGAATTTAT ACGCAGAGAT AGTCTATACA CCAATTCTGG CACCTGATGG AACCATTTTC AAGAAGTTCA GAGGCAATAA CAGTGGGCAG CCTTCAACAG TTGTGGACAA TACGCTCATG GTCGTCATAG CAGTTTACTA TTCAAGTATT CAACTTGGTT GGACTTGCGA TGATGTGCAG AGTCGACTTG TTTTCTTTGC CAATGGGGAT GATATAGTGC TGGCTGTGCA GGAGGCGGAT GTGTATGTAT ACGATCACTT TGCTAAATCA TTCGCTGAGC TCGGTCTTGT GTACAACTTT GATGAGAGAA CCAGAAACAG GGAAGATCTA TGGTTTATGT CACACAAGGC AATTGAGGTG GAGGGTTTGT ATATACCTAA ATTGGAGGAA GAGCGAATTG TCTCCATTTT AGAGTGGGAC AGGAGCAAAG AAGTGATGCA CCGCACAGAG GCTATTTGTG CTTCAATGAT TGAAGCGTGG GGCTATCCCG ACCTTCTCAA AGAGATCAGG AAGTTCTATT TGTGGCTGGT GCAAAGGGAT GAGTTTAAGG AGTTAGCTGC ACTTGGGAAG ACACCTTACA TTGCTGAAAC TGCCTTGAAA AAGTTGTATA TAGACAAGAA CGCAAGTCAC TCGGAATTGA GCGCATATCT GACTGCCATC ACTGAGAATC ATGAGAATGA GTGTGGCGAA ACAGTCTCTC TGCAGTCAGA TCAGAAGGCG GGTGAAGCTT TGGATGCTGG AGCAGGTGCG AAGAAGGACA AGAAGGCACC TAACATTGGT GAGAAAGAAA CGCCTGAAGG GAGTGGTTCA GGTGTGAAGG ACAAGGACGT GAATGTCGGC ACGCAGGGCA GAGTCGTGCC ACGATTACAA AAGATCACAA AGAAAATGAA TCTACCAATG GTTAAGGGAA ACATGATACT CAATCTAAAT CATCTCCTTG AATACAAGCC TAATCAAGAG AAACTGTGGA ATACCAGGGC TACTGATAGC CAATTCTCTT CATGGTATGA AGCAGTGAAA CAGGAGTACG ACTTGGATGA CACACAGATG AGTATTGTGA TGAATGGTTT CATGGTTTGG TGCATTGACA ATGGCACATC ACCAGACGTG AACGGAGTGT GGGTCATGAT GGATGGGGAT GAGCAAGTTG AATATCCTTT GAAACCTATG GTTGAGAATG CAAAACCCAC ACTGAGACAG ATAATGCACC ATTTTTCTGA TGCTGCTGAA GCATATATTG AAATGAGGTG TTCGATGGGG TCATATATGC CTAGATATGG CCTCCTGCGC AATTTGAGAG ACAAGAGTTT GGCACGTTAT GCTTTCGACT TCTATGAAGT CACTGCAAAA ACGTCCACAC GAGCACGAGA AGCAGTCGCG CAGATGAAAG CTGCAGCTCT CAGCAACGTT AACAACAAGC TGTTTGGCTT GGATGGGAAT GTTGCGACCA CTAGCGAGAA CACTGAAAGG CACACTGCAA GGGATGTGAA TCAGAACATG CACACATTAC TTGGAATGGC TCCCATGCAG TAAAGGGTAG GTAAACTATC CACAGTTATT GGCTCGCTGT CGACTTAAGT AAGTATAGTA GTTTGTTAAG CTTGTTTACT TAGTGTGGTT TGACCATCTT TCAATTTATG CAAGCGATCA GAGTGGCTTT GCCACCTACT CATAGCTACT AGTATTTATG GTTTGGTCAG GGAGGATCAC AGCAACGCCG AAGCAACCAG AGTGATTGAA TCACGTGTGT TGTCTTAGGT TTGGCTGTGT TTATCGTCCC TGACCAAACC ATAAATACTA GTAGCTATGA GTAGGTGGCA AAGCCACTCT GATCGCTTGC ATAAATTGAA AG 
Length9842
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Ahg951390
1.41421 Ahg896231 cytochrome P450, family 83, subfamily A, polypeptide 1
1.73205 Virus1467
2 Ahg952370 Plant invertase/pectin methylesterase inhibitor superfamily
2.44949 Ahg497428 F-box/FBD-like domains containing protein
2.64575 Ahg947287 Protein of Unknown Function (DUF239)
2.82843 Ahg358673
3 Ahg344503
3.16228 Ahg946899
3.74166 Ahg897044
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression