Detail



ID : Virus3044

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionCanna_yellow_streak_virus|plants|ssRNA
Sequence
AAAATAAACC AATCCCAACA CAACCTAACG AATTCTAGCT CAATCGCTCG AAACTTTTGC TTTCAAACTC TCGGAAACAA ACTTTCGGTT TACTCGAACT CCAGGCACAG CCGAACACTT GTGAGCTCTC GCATAGAGAT AAGCAAGATA ACCATGGCAG GAGAATGGAC TTTTGTTGTT GACAGGCGCG AACGAAGGCT CACTGATGAG CAGAAGATAT TACGCGCACA GCGTAAATTT TACGCAAAGC ATCGTGTGTA TGATGCAAAG CGTGCTCGGG AACATAATGC ACGCTTACTT AAGATGTCAT TACCTGAACT TGAAATAGCA ACTAATGCTA AAACAAAGAT CGACGTGACC AGAGATCGCA ATGACGAGGT AATGTTACAT ACGGTGGTCA AGCCAACCAA GGCGAAAGCT CAAGCCCTAA GCGTAAAAAG GGTTTACTCC AAGTTCACCG AAGTGGACGT TAGCAAGTTT GCTAAGATTC TCATAGACCA GTGTGCTGCC CACAAAATAG TGGTTGAATT TATTGGAAAA CATAAGAAGA AGCGCACCAC TCTAAGGCCG TTCTATTTTG GAACAAAAGT TCTTCTTAAA CACAACACCA GGCACGAAGC TGGCCAAATG GTACGCAATG ATAGTCCACT GAGGGGTGCA GATTATGAAT TTCTACACCA AATTGTCAAT CAGTATGACA TAGTCACTGC AAGTGAGCTT GGGAACTTTG CACATGGATC GAGTGGAGTT TTGTTCGAAC ATCCTGATTC TGCTGAACTG TTCTCCATTC GTGGTCGCTG TAGCGGGCAA CTGGTTAACG CACTCATACC GACACATGGG CACCTATCCC TAATTGATCA TTACGCATCA GAGGAGGTAA ACGCTCGTGA TTTCTGGCGT GGTTACACAG ATTTATATTG TCGACAGAGA CGTGAAGCGC ACGACCACAA AGATCACATA GCGCAAATTC CAGTCGAAAC ATGTGGACGT CTTGCCGCAA TCATGGAACA CGTGTTAAGA CAATCATATA AGATCACGTG TGGACTTTGT TCTCATACAT TCGATGAGGA AAGTGATGTG AGCGTTTGTG AGCGAATCCA CGATGCAATC AAACGCATTG AAGAACAGAA CAGGTTATTG TTAGCGTCTG ATCCAGCATT GAGAACAAGT CTGCAAGCCC TCGAGACAGT AACAACATTC ACAACTATCC ACCACACAGC TTGTCTAGAA GTAATGAAAA CGTTAGATCC AACATTACCA ACGCCAGCAA ATCGCCTAGT AGACATTGCT AAAAAGTTGA TGCAACTTAA AGTCCACGAT GGTGAAGCTA TGAAAGAGAT TGGTGACAAT TTGCTCGAAG TCACTCGGTG GTATGCAAAG CGAAGTAAGT TGAGTGAAAA GGATGAAATC GCCACGTTCA AGAACAAGGT ACCACCACGT GGAGTTGTTG GCAACGTATT AACTTGTGAT AATCAGCTAG ACAAGAATGG AAATTTCCTG TGGGGTCAAC GAGCATATCA TGCGAAGCGG TTTTTGTCAA ACTATTATGA AATCGTGGAT CCTACGGATG GTTATGATAA ACATGTGATT CGAAAGTCAC CATACACTCA ACGGCATCTT GCAATCGGAA AACTTGTTGT GACAATGGAC CTAGCTAAAA TGAGGGAAAG AATGAGAGGA CTGCCAATCA AACCGCTAAA CATAACTCAG TCATGCATAA GTAAACTAAA CGGTAACATT GTTTACCCCT GTAGTTGTGT AACACAAGAG AGCGGAAAAG CACTATGGAG TGAGTTCACA ATGCCAACTA AGGAACACAT TTCACTTGGG AACGCAATGG ATCCGCAATT GGTCGACATG CCCCGAACAG ACCCACCACA AATGTATATA GTGAAGGATG GCTATTGTTA CTTGAACATT TTCCTTGCGA TGCTAATTTA TGTGAATGAA GAAGATGCAA AAAGTTTCAC TAAGTTTATA CGTGATAGAA TCCAACCAAT GTTGCGAGAA TGGCCAACTT TGCAAGACGT AGCCACAGCG TGTTATTTGA CATCAACGTT CTACCCTGAG ACAATGCAGG CAGAAATCCC TAAAATTTTA ATTGATCATG AGAGCAAAAC TGCGCATGTA CTAGACACAT TTGGTTCCTT GACGACTAAT TATCACGTGT TGAAGGCAAA CACAGTTGCG CAACTGGTAC GATTTGCGTA TAACGATTTA GAAAGCGAGA TGAAAGGGTA TGTCGTAGGT GGGGCCTTCA AACAAAACTC GATTGTCCAC CTACTTGAAG CTTTGATCAA GGGGATATTT AATGTCAAAG TCATGGAAGA GATAATACGC GAGGAGCCTT TTCTGTTGTT TTTGTCAATT GCCTCACCAT GTGTGATTAT GAATATGTAC AACAACGCGA ATTTTGAGAG AGCTATGCGA TATTATTCGA CCAGAAACAT GCATTTAGCT AGTCTTTTTG CAATGATGGA AGCGTTGTCG CAAAAGGTAA GCGCAGCAGA GATTTTATCT GAACAGTTAA CAATACTCGA AACAGCAGCT GGTGAGATTC ATGCACGTAT GGCTGGTTCC TTCCAAAACG ATCCACTTGC ATTGTATGTG CGCCATCACT TATTGGTTAT GATGAACCGA GCTGATATGA ATGCTCAGCT AAGAGAGGAG GGCCACACAT TGTTTGACAC GAAGACATAC GAAATGATCG AGAAAAAATA CGCAAACGAC ATTCAAGCTG CTTGGCACGC GCTCGGCTTT GTTGGAAAAT TATCAGCGCT GCGACAGTTG TGTGCTATCA AGAAAGCAAG AGCAAAATGT TTAAAACCAA TGGCAAAAGC AGATTTAGGC GGAATTTACA ATATATCTCC AATGCTATTG GTTTCAGAGT GTCACGAGAA ACTTCGCACA CCGATCAAAT ATATTTCTCA GAAACTCCAG AATGGATATA TTTCAACAAA GCATGCACTG CGAGGAGGAA TTATTCGAAC AGCATACCGA TGTCTACCAG ATATTTTCAC AATGGTTAGA GTTTCATTGG CAATGAGTGT TACAGTTTCA ATGCTATATA CAATTTGCGC TACAGGAACT GAGTATAAGA AGTATAAGCG CGAAGCGTTG AGAGCTAAGA TTGAAAATGA GGAGGAAATA GTGCGAGGCC TGCACACACA ATTCATGAAA GATACGGAAT GGCAAGGGAC AGAAGAGGAG TTCATAGCAT ACATTGATCG TAAACATCCC GACTTTCTCA CAAGAACAAT GGTTATGTTA CGGGATGAAG TGGAGCACCA AAAGAAGGGT TCAACGGAAT TACAGCTCGA ACAGGCAATA GCTTTTGCAA CTCTTCTCAC AATGTTGTTT GATGCAGACA GGAGTGATGC TGTATTCCGA ATATTACAGA AAATTCGCAG TTGTACCCAG ATTATTGGAA CAACGGTTGA GCATCAAGGG ACTCAAGTGG ATGAACCACT AGATATGGAG AAACTTAAAA ACCTTACAGT CGATTTCGAA GTGAAACAGG AAATAGCGCC TCGCATCGCA AACCACGACA CCACATTTGA AAAATGGTGG AGCACACAAA TAACACAGGG CCGCACTACA ACACATTACA GAATAAAGGC GAGTTCATTG AATTTAGTCG GAAAAATGCT GCAGAGGTAT GTCACAAAAT TGCACATTCG AGCACAGCAC GGCATTTTAC TAGTGAAAGG TAATGTAGGA TCAGGTAAAT CAACTGGCAT ACCAAATTAC CTATGTTCCA GGGGAAAAGT TTTGATGTTA GAACCAACAA GACCGCTCAC GGAAAATGTG TTTCAACAAC TGCACAATGA ACCATGGTGT CTTGATCCGA GCATGCAAAT GCGTGGTAAG AGTGTTTTTG GTTCAACTCC AATTAGTGTG ATGACAACAG GGTTTGCACT ACATTTATTT GCAAATAATG TTACGCGACT GGAAGAATTC AAGTTCATAA TTTTTGATGA ATGCCACGTA CTTGATGCTA ATGCAATGGC TTTTTACTGT TTACTCGAGG AATACAACTA CTCAGGGAAA ATTCTTTCCG TGTCTGCCAC ACCACCTGGG AAAGAAACTG AATTTGAAAC AGAGAAACCA GTTGATTTGC GCATTTTTGA GGATGTCTCT TTTGATTCAT TCGTCAATGA GCAAGGCTCA GGCTCWAAGT TAGACGCAAC CGCCGTGTGT GACTCAATAC TTGTCTATGT CGCCAGTTAC AACGAAGTGG ACTCTTTGAG TAATCGATTG CTAGAAAGGG GTTTTAGTGT GACAAAAGTT GACGGAAGAA CCATGAGCAA TGTTAAGAGC AATAAAAATC CACTAGCAAC AGCAATTCAT GATGGAAGTA TTAAAATTAG TGGCAATAAC TCCGTGAATG GGAAAAAGCA CTTCATAGTA GCTACAAATA TCATAGAGAA CGGGGTTACA TTAAATGTTG ATGGAGTTGT TGATTTTGGA ACGAAAGTGG TCGCTGATCT TGACGTTGAC AGCCGAGCCA TCACTTACAA CAAAGTGTCA ATATCATATG GTGAACGAGT GCAACGACTT GGGCGAGTTG GTCGGTTTAA GAAAGGATAC GCATTCCGAA TTGGAACTAC ACAAAAGGGA ATTGTAGACG TGCCATCAAT GACAGCAACA GAGGCAGCGT TTCTTTGTTT TGCATATGGC CTGCCTGTCA TTACACACAA TGTATCAACC ACTCACCTTG CGAACGTGAC TAGTTTACAA GCTAGAACTA TGCTTCAATT TGAATTACCC ATCTTTGTCA TGAGTGAACT TGTAAAGTAT GATGGACAYA TGCACCCAAC GATTCACAAA ATTCTCACAC CGTATAAGCT CAGGGATTCG TCAATTACTT TGCGCGAAAC GGCCCTTCCA CAAAACGCTG GTGATGTTTG GATCGATGTT CAGAATTACA AAAAGATGGG TTTCCGACTC GATTTGGCTG ATGACATTAA AATTCCATAT TTCGTGCATG GTGTGAGTAA CGATGTATAC AAGCAAATTT GGGAGGCTGT TAAAATTTTT AGATCTACTT GCTGCATGCG TCGAATGACA AGCTCCTGCG CTGGGAAAAT TGCTTACACA CTGCAAATCG ACAATCATGC AATACCACGA ACGTTAGCAA TCATTGACGG CTTGATACGT GACGAGCGAA CTAAACATAA TCATTTCTTG AGCATGTCAT CTAATTCAAC TTCATCATAT AACTTCACAT TGAATGGAAT TGTTGACATG CTAAGGAGTA GATACATGAG GGATCATAGT CTCGAAAATA TCCAAAAACT GGAGATGGTT AAAAATCAAG TCATTGAATT CGATAACGCA AAAATTAGCT ATGAAGATGT TGATAAAATC AAAAACTTTG GGTCACTTCA AACTGTCATT CATGAAACAA GAGAGGGTGT TGCCAAAGAG ATTGGATTAC AAGATTGTTG GTCAAAGGAA TTAATGTGTA AAGACGGTCT CATAGCTTTC GGAGTTATGA TTGGTGGAAT TCTGATTGGG TGGAAGTGTT TCAATTATTA CTTCCAAATG GACGTTGAAC ACCAAGCAAA GTCAAAACGC TCAAAGCAGA AGCTCAGATT TAGAGACGCA CGTGACAGGA AGCTTGGGCG AGAAGTTTAT GGAGATGACG CAACTATGGA GAAATACTTT GGTGAAGCGT ACACAAAGAA AGCGAAGAAA GGGAACAAGA CACATGGTAT GGGAGCTAAA ACTAGACGTT TTTGTCATGT GTATGGTGTG GACCCAACAG AGTATGACAT GATTCGGTTT GTCGACCCAT TGACAGGCAT TACACTTGAT GATACAACAC AACCGGATAT GGAGTTAGTA CAGGAGCATT TCCAAGCTGT GCGAAATCAA CTCATACTAG ATGACCAGTT AGATAAACAA CATTTGTACA CAGCGAAAAC TATTCATGCA TACTTCATCA AACATGGAAC CCGAAGTGCT CTAAGATTGG ACCTAACGCA GCATGTCCCC ACATTGTTGT GTCAGAAATC TAATGCAATA GCTGGCTTTC CAGAACGTGA GGGAGAATTA CGACAAACAG GAACTCCAAT TACAATCGAT AAGGACGCGG TTCCAAAACC AAACGAAGCT GACGTCGAAC ATGAAGGTGT GGCAACACTG CAAGGTATAG CAAATTACAA CCCAATCTCA AACAATATTT GCATCCTGCG GAATGAATCT GACGGTCGAA CTGATGAAAT GCATGGAATT GGGCATGGAC CGTATGTCAT TGCACCTAGC CACTTTTTCA CAAGAAACAA TGGTAGCTTG TCAATTCGAT CAGTGCGTGG CCTGTACAAA ATCGAAAACA CATGCAACTT GCGAATTATG CCCGTAGAGA ATCGTGACAT AGTGATTATT CGATTGCCAA AGGACCATCC ACCCTTTACA CATTCGATCC AGTTTGAAGA GCCATGTAAA GATGACAAAG TTGTAATGTT AGGCATGAAT TTCCAAAATG GAAGAAATAT ACAAGAGTTC TCGGATAGCT CCATAATAGT CCAGCAAAAT GAAAGTTTTT GGAAGCATTG GATCGCAACT AAAGCTGGCT ATTGTGGACT TCCACTGGTG AGCACTCGCA CAAAGGCGGT TGTAGGAATT CATAGCCTAC GAGCCACAGA TGACAGCGTA AACTACTTTA CGTCTGTGAA TCGACACTTG AAAGACGCAT TACAACTAAA CATCGACACG TTGAAGTGGA TTAAAGGCTG GAAGTACAAC ACAAAGCTAT TATCGTGGGA TGGAATGCAT TTGAAAACAT CAAAGCCAAG CGCAGCATTT AACACAATAA AGGAAGTGAG GGTTGTGAAT GAGAATATGC ACAATGTAAG CGAAGACACG TGGCTAACCC GCCAGCTCAA AGAAAATTTG CTCGTTGTTG GAAAATTGCC AGGTAATCTT GTCACAAAGC ATGTTGTCAA AGGAAAATGT CAGTTATTTC AACTCTATCT GAACTGCAAT GAAGAAGCTA ATGCATTTTT TAAGCCATTG TTGGGACATT ATGGAAAGAG CAAACTCAAC AGAGAAGCGT TCATCAAGGA TTTCACCAAG TACGACAAGC CGATTTTGGT AGGAAGCGTC CAAACAAATG AATTTGAAAT TGCACTTAAA GATGTTATCA GAATGTTACA CTCATTGGGC ATGAAAGACT GTAATTATGT CACAATCGCA CATGAAATCT TTGACTCAAT GAATATGAAA GCTGCAGTTG GCGCATTGTA TGCTGGAAAG AAGCGAGAAT TCTTCAAGGA CTGGTCGGAT GGAGATAAAG AGAATTTGTT GGAAAATTCA TGTAGTAGAC TTTTCACTGG TAAGATTGGC GTTTGGAATG GTTCATTGAA GGCGGAATTA AGACCGACTG AAAAGTTAAT CGCAAATAAA ACGAGAACAT TCACTGCAGC TCCTTTAGAA ACATTGTTGG GTGGAAAGGT ATGTGTCGAT GATTTCAATA ATCAATTCTA TTCAAACCAC CTTAAGGGAC CATGGACAGT TGGCATTTCA AAGTTTTATA GAGGATGGGA CAAACTCTTA CGCGCGTTAC CAGACGGTTG GATTTATTGT GATGCAGATG GATCGCAGTT TGATAGTTCA TTAACACCAT TTTTGTTGAA TGCAGTACTA CGAATTAGAC TCGCATGTAT GGAAGAGTGG GAGATTGGAG AGCAAATGTT GAGAAATTTG TATACTGAAA TTGTTTATAC GCCAATCGCA ACACCGGATG GGAGCATTAT AAAGAAACAC AAAGGCAACA ATAGTGGACA GCCATCAACA GTCGTGGACA ATACACTCAT GTTGATACTT GCATTCACTT ACACCATGCG AGTGAACAAC ATCAGCGCGG TAGAACAAAA TAACATAATA CGCATGTATG GAAATGGTGA TGATTTGTTA ATTGCAGTGC ATCCGGACTT TCAGCACATT CTTGATACAA TGGGAAAGCA CTTCGCTGAT TTGGGGTTAA ACTTTGACTT TTCAAGCCGC ACAACGAACA AAGAGGATTT ATGGTTTATG TCACATAAGG GCGTTTTAAT TAATGAAGTG TACATACCAA AACTTGAGAA GGAGAGAATC GTAGCAATTC TTGAATGGGA TAGAAGCACT GAACCGGAAC ATCGTTTATC TGCTATCTGT GCAGCAATCA TTGAATCATG GGGTTATGAT GATCTAACGC AACATATTCG AAAGTTTTAT CAATGGGTGT TAGATCAGGA GCCATACAAA GGGCTAGCAC TACAAGGGAA AGCCCCGTAT TTGTCTGAGA GTGCTTTAAA AAGATTGTAC TTGGATACTG CCGTCCAGGA TTCTGAGCTG TTTGAGTATT ACAGAGCAAT ATATGCAGAT TTAGAACAAC AACAGGACGA TGTACTAGAG GTCGAACATC AAGCTACTGA AGATGCCGGT GTCAACGCTG ATGACGACAA GGCAAAGAAG ATAGATGCGA AAGATGGCAA CAGAAGCGCT GGAGAAGCTA AAGACAGAGG GAGTACATCA ATTGAAAGAG TTGATAACCC AAGTGGACAA GAGGTAACGC CTGCAGAGAA GGATGTCGAT ACAGGAACAG TTGGTAAATT CACGATTCCA AAATTAAAGA AAGTCTCACC AAAAATGCGG CTACCAAAAG TTGGAGACAA AACATTATTG AACGTCGAGC ACCTGATAAC ATATGAACCG GACCAACGCG ACATTTCAAA CACAAGAGCA ACACATTCAC AGTTCAAGCA GTGGTACGAG CAAGTCAAGA AAGAATATGA TGTTAGCGAC GATCAAATGC AAATTATTCT CAATGGTTTT ATGGTTTGGG CTATTGAGAA TGGAACATCA CCAAACATCA ACGGGTATTG GGTAATGATG GATGATCAAG AACAAGTAGA ATACCCACTC AAACCAATTG TGGAGCACGC CAAACCCACA TTGCGTCAGT GCATGATGCA TTTCAGTGAT GCAGCAGAAG CATACATAGA AATGAGAAAT CTTAAGCAAC CGTACATGCC CAGATACGGT TTACTCAGAA ACTTAAATGA TAAAAGTCTC GCACGATTTG CATTTGATTT CTATGAAGTA ACTTCACGAA CACCAAATCG AGCACGAGAG GCTCATGCAC AAATGAAAGC AGCATCAATC CGCGGAGGAA CGAATAATTT ATTTGGATTA GATGGAAATG TTGGCGAAGA TTCTGAGAAC ACGGAGAGAC ACGTGGCAAC AGATGTGAAC AAAAATACGC ACTCTTATCG CGGTGCGCAA ATTTAGATTC ACTGGTCTCT CTATACAATT AAATAAATAA ACGCCACCAA CTGGGAGGCA CTAGTAATAT AAGTCGGTCT GCACCTTTCC GAGTGATGTT TTACATCCTG TCATACTAGT TGCAATGCTG TTCTCAGTTA CCAACTGGTG CACCTGAAAG GTCGTGTTTA CTAGTAGCAT CAAACCCATT TAAACTAGTG TGGTTTTACC ATTATGTTTA TTTGGGCGCG AT 
Length9502
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Virus1870
2.82843 Ahg943358 Ankyrin repeat family protein
2.82843 Ahg932351
5.74456 Ahg356803 Ribosomal protein S5 domain 2-like superfamily protein
8.94427 Virus3415
9.48683 Virus3877
10.247 Ahg919650
12.3288 Ahg331182 Major facilitator superfamily protein
13.2665 Ahg931022
14.6969 Ahg923283 RING/FYVE/PHD zinc finger superfamily protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression