| Annotation |
|---|
| Description | Cassia_yellow_blotch_virus|plants|ssRNA |
| Sequence |
GTAAAACTTC TAACAACTGA CTACTCGCAC TTTACCCAGA AAAGTGTGTG TTAGAATACA TCGTTTTTTC TCACTCAAAT TGGTAGTCTT GAGTGATTGT AGCTAACGAT GTCTAGTGTT TTTACCCCGT TTTCAGGTTC CTCGCGAACG GTGGCGATTG GACAACAAAC TGGAGGTGTG GATCAGAGCT CTCTGTTGTC GACCCTTTTT TCAGAAGAGT CTCGAGATCA ATTCGCTAAG GAGTGCAAAC TTGGTTTGTA CACAAACTTA CGATCATCCC AGAGGTTTAA TTATGTTGAT CTAGTCCCCC AAGCCCACGG TTCGAAAGTC CTCAACCTGT TCAGAACGGA ATATGAAAAG GGTAGGATTC CCTCGAGCGG CGTTCTTAGC ATTCCCAGGG TACTCGTTTT TCTCGTTAGA ACTTCTTCTG CGAGTGAAGG CGGTAGTGTC ACCTTGAGAT TGGTCGATCT CAAAGGTGCT TCGAACCTCG ACGGTTTAGA AGCTGTGGAC GGTACGCAGG AGGCGACCGT ACCGATCAGT GATTTACCGG CGATTGTTTG TTTTTCACCG TCTTACGATT GCCCAATGGA AATGCTCGGA AACAGACCCC GTTGTTTTGG GTTGGTCTCC CAATTAGACG GGGTGTCTAG CAGCGGTACG ACAGTAATGA GTCATGCCTA TTGGTCAGCG AGCTTTAGGA CAAAGCCAAA CAATTATGTT AGGCACGTCC CTAAGTTCGT TTATGTTACT CCCTTTGAAC GACTGGTGAA ATTGAACCGG AAGCAATTGA AAAATTACAT CAAGGGTATT TCAAACCAGT CTATCGACTT CGGTTACCTT ATGGGTAAGA CCGTTGATCG AGTTCAAGAG GTTGTCGATA TAACTGCTAG CGAGGAGGAC AAGGAATCAC TAACATCTGA CGCCGTTGAC GGTGGCGATC AGAAAGTAGT CAAGACCGAA AGGTCCGCAA CCGCTAAATC CGTCGCCGGG TTGCCAGTAT CCCGGAACAC GCTAATTTTT AATAGATAGC TGGGGAAACG CGAAAGCGGA TGAAGATCGG GAGGAGAGTT TGGTACAGCC GTTTGCAGCA CGGGGCGATC TAAGCTTTGG GTTCAATTCC CTTACGCAGT GACCCCTAGG TGTGAGGTCC TATCAGGCCA TAGCCCGATT GTAGTCTGTG TGTAGTGTTA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AATCTATGTT TTCAATTAGC GTAATTTAAT TAAAACTGAC ATGTCACAGA CTGGCACAGG CAAATCAACC CGCGCTCAGC GGAGGAAGAT AGCGAGGGAA GCTCGGAAAG CTTTGAAATT ATCCAACCCT CGGCCTGTTG TGTTAGAGCC GGTGTCTTCA GGGATAGGTA GGCCCCTGAG GGCTAGGCAA GGTTGCGTAA TAAGTGCGTG GAGCTCCTCT AATTCAGCTT GTGATGCTAA AACCACGAGT CAAATCTCCA TCACTCTACC CACGGAACTT TCATCTGAGA GGGGTAAGCT TCTGAAAGTG AACCGTGTTA TGCTCTGGAT GGGCCTGTTA CCTTCGGTTT CAGGCACAGT GAAGAGTTGT GTTACTCCCA CTCAGTCCAC TCCGGCTGCG GCTTTCCAAA GTGCTTTGGC CGTGGCCGAT TCGTCGAAAG ACGTTGGTGT GGCATTCTAT GCAGAGGCCT TTAAAGGGCT GACGCTGGAA CAGTTGACGA ATGACCTCAG TATCTATTTG TATAGCGCTG AGGCTTTGTC GGCTGGTGAT GTGGTGGTTC ACCTTGAGGT GGAACATGAC GAGCCTGTAT TAAATAGGTT CTTCACGGGT CTGCTCTAAG CCTCCCGCTG TGAAGCGTTA AATCAGGTTG GTGTCCTAAA CACCAGTTCT AACGGTTTCT TTAAACCGTA GTCGTGGTTG ACACGCTTGA TTCTTACAAG AATCAAAGTT GCCTTTGAGA GTTACTCCTT GCTCTCTTCA GAAGTTCTCT ACCGAGAACG TGCAGTGGCT GTCATAGACA GCCTTCAGAC TGCGGGCAAC GTCAGTTCCA TAAGGAACTG ATAATCTCCA AAAGGAGACC AGTAAACCAC AAGAACGAGG TTCAATTCCT TGTAGACTTA CGGTTTCAAT TGTGTTGTGT TTATTCAACA TTTACCAATT ATGTCTCGAT TTATTAACGG TGAAGAGTAC GAAATTCCCA GTTTTCAGTG GTTGATTGAT GAATCCTTAG AGCGACTAGG GAACCTTCCT GCCGAAATTT CGACTGATGT CGTTGATGAA CCGAGAGTAG AGATAACGGC AGAGGGAACC CTTGACAGTT TCTTGCATGC TGTCAAGCCT TTGGTGATTT CAGGTGAATA TCAACCCCCC TTCGACCAAG CACGCTGGGC CTCTTGCTGC CAGCAGGTGT ATGAGCTTAA TGAAGCCTTT GGCCACAAAG GCTTGATTCC ACCTCCTGAG ATGGCCCGCA TGTTATATTT GGATATCGAA GGTTCCTTCA TTAATGAAGA GGAGTGTGAT GACTGGATGC CAGTTGACAC AGATGATGGT TATCTTGATT ACACTAGTAA GAAAGATCTC CAGACTGTGA ATACTGAAGA AAATGATTTG GCTGAGATGC CCGAGCTGGA GGAATGCAGC GACAGCTCAA AGTCCGATGT GGTGGAGTTC ACCCTGGCGG ACAGATTCCA GGTTACAAGC GGAGAGTTTT TTGATCTTGA AAACTCTAAC TACCAACTTA CGCTTGATCT GCAGAATCCC ATGATGCAGA TGGTCGAGGG TCTTGAAGAT ACTCTCCCCG AGACTGAACC TGATGAACAG CTCACCTTGG CTCCTCGGTT TACCGAGAGG GTAAGTTGTG AAGCTTTGGA AGGTGCCGGA CACCGAATGC TACCCACTCA TGCATATTTT GACGACAGTC ATATGCAGGC TCTGGAGGAG ATAGCAGATT ACAATCTTGA TTTCGAGAGG ATTAAGATCT CCCAGAGTGG TGTCGATTGG TACAAAGATC CTGACAAGTA TTACGAACCG AAGATGCAAA TCGGTTCGTT CTCCCGGCGA GTGGGGACTC AGAAGACTGT GTTAACAGCC CTCAAGAAAA GGAATGCTGA TGTTCCTGAG TTGGCTGATA ATGTTGATAT CCAGTCTGTG GCCGCGGAGG TAAGCCAGAG GTTTTTTGAG ACCTTTTTAA ACCCTGGCTG TGAAAATCTA TTCAGAGGTG ACTTGAATGT CATGGCCAAA GCCTTTGAGT ATGAGAAAAA ATGGTCTAAG CACAAAGATC TTGTTGATGT GAATGTTATG TCTGAAAGAA ATTTGCAGAG TTATAAACAT ATGATAAAGA CCGATGTTAA GCCGGTTATC AATGACACTC TGCATCTTGA GCGAGCTGTG CCGGCTACCA TTACCTTTCA TGGTAAGGCT GTAACCAGTG CCTGGTCGCC CTTCTTCACA TCATGTTTTG AAAATCTCAT CTTGCATCTG AGATCAAGAT TCATTGTGCC AGTGGGAAAA CTATCGTCCC TTGAAATTAA GAACATGGTT CTTAATGATA AGTACTTCCT TGAGGCGGAT CTTAGCAAAT TCGATAAGTC TCAAGGGGAG TTACATCTGG AATTTCAAAG GGAGATACTT TTAAAGCTTG GTTTTCCTGC GCCCTTGGCT AATTGGTGGT CTGATTTCCA CCGACAGTCC TATCTCTCCG ACAAAAATGC TGGTGTCGGA ATTCCTGTCT CATTTCAGCG TCGTACTGGT GACGCTTTTA CGTATTTCGG GAACACTCTG GTGACAATGT CTATGATGGC TTACTGTTAT GACTTGTCGA AGATGGAATA TTGCTTCTTC TCTGGAGACG ATTCTCTACT CATCTCTCGA GAGAAACATT CCTTCGAGCC ATTGTTGTTT CAATCTCTTT TCAACATGGA GATTAAAGTC ATGGAGCCCA GTCTGCCTTA CATCTGTAGT AAATATCTGC TGGAAACTAC AGGTGGGCGT GTGGTATCGG TTCCTGACCC CGTAAGAGAA ATACAGCGTA TGAGCAAGAG GAAGATTGTG AAAGATCCCT CAGTGTTACG AGCTCATTAC GTTTCTTTTT GTGACAGGAT GAAATTTTTA AAGAAGCTCG ATGAGAAGTC TTTGAGCTTG CTTTGCAAGT ACTGCTGTTT ACGTCAGCGT AAACCGGATA TTGAGATGGA CGTCCGAATA GCCGTTTCGG CTTGCGGTTA CTATGCAGAG AATTTCGCCA GATATGCCGA GTTGTTCGTG ACCAACGGGG CTGAGGTTTT TATGAAGAAA AACCCCTGTA AACCAGAACT TCCCGAGAGA TCTGATGGAA GTTGGTTCAG AGACTGGCGT AATACTGTTT TTCCTCGTCT CGCAGATTCA TATGTCAGGT TTTTTGGTCG GTATTCTGTC GATCATACCG GTGACTATGA GTCTGTGGTT AAATCATGCA AGGCTAAGGC GGTTAAGAAG TTGTGGTCTG ATTCTTATAA AGCCGCTTTA GATAGACGAG ATGACCTGAA TGAAAAGATT CGTAAGGATC TGGCTTCTTT TGAGGCCTAA CCTTATTTTC CTTTCTTTCT TGTTTGGTTG GTGTCCTAAA CACCAGTTCT AACAGTTTTC TTTAAACTGT AGTCGTGGCT GACACGCTCA ACTCTTACAA GAGTTGAAGT TGCCTTTGAG AGTTACTCCT TGCTCTCTTC GGAAGTTCTT TAACGAGAAC GTGCAGTGGC TGTCATAGAC AGCTTTTAGA CTGCGGGCAA CGTCAGTTCC ATAAGGAACT GATAATCTCC AAAAGGAGAC CAGTAAGACC ACGAGAACGA GGTTCAATTC CTTGTCGACT CACGGTTTTA ATCAACTTTT GTTAAAGTTT TAAAATGGCT TCTTTAATTG ATTTGAACTC TCTCATATCC AAAAAGGGCG CTGAGTCCAG AGGCGTCCTA GATATTGTGG ACAACCAGGC CACTCAACAA GTGTTAAGTC AGGTTGAACA CCTTAGGAGA TCGAAGAAAA TCAATATACG TAATAAGTTG GCACCGAGTG AAGTAGAGGC ATTCAAAGCT CGTTATGGTG GCGCATTTGA TCTTAATTTG ACTCAAGAAT ACAATGCACC CCATAGTCTG GCTGGGGCTT TGAGAATTGC CGAACACTAT GATTGCATGG ACTCATTCCC ACCCGAAGAC AGGATCATAG ATTTTGGTGG GTCCTGGTGG CATCATTATG CCAGGAAGGA TTTCAGAGTT CACTGTTGCT GTCCCATTTT GGGGGTAAGA GACGCTGCGC GTCATGAAGA GCGCATGTGT CGGCTGAGAA GACTCTTGCA AAGTTCCGAT TACGAGGAAA CGCCCGATTT CTGCTTGAAT AAAGCTAGAG ATTGTAACGT CCAGGCTGAC TGGGCGATAT GTATTCACGG TGGTTATGAC ATGGGTTTCA AAGACCTGTG TCACTCCATG CGTAGTCATG GCGTTAGGAT CCTAAAAGGA ACTATTATGT TTGATGGGGC CATGTTGTTT GATGAATCCG GGTTTCTACC CCTCCTTAAA TGCCGATGGA AAAAGGAGAA GGGTTTTGTA AAATTTGATT TTGAGAATGA GAGCACTTTG TCGTATATCC ATTCCTGGGA TAAACTTGGT TCTTTCTTCA CGGAGTCGGT CTACCGTATC GGTAGTACCA CTTATCTCCT AGAGAGAGAA CTGATAAAGT GCAACATCAT GACTTACAAG ATCATAGCCA CGGATTTGCC CTGTCCTAAA GAGACTCTCA GGCACTGTGT GTGGTTTGAA AACCTATCAC AGTACGTTGC AGTGAACGTC CCCGTTGATT TCAATCTGTG CAGATGGCGT CGTGTCAGAG TAGCCGTTTC GACGGTGAGA GAGGTTGAGG AGATATCCTT TCGTTGTTTC AAAGAAAACA AAGAATGGAC TGAGAACATG AAGGCTGTGG CTTCTGTGCT CTCAGCTAAG TCCTCAACAG TAATTATCAA TGGTCAGGCC ATCATGGCTG GTGAACGCTT GAGCATTGAT GATTACCATC TCGTAGCCTT TGCTCTGACC CTGAATCTGT ACATGAAATA TGAAAACTTG AGATCTTTTC ATGAGGGTCT TAAGTGGGGA GGATGGTGGA ACCATTTTTT GACCAGATTT TGGTGGCGAG GAGACGTCCC AACTGATTCT AGACCTTGGC TGGTGAATCT TCTTGGTCAA TGGTTTCCAC GTTTAAGGCT TGATACCTAT GCTGAGTCCT GTGAATTCAT AGCGAAAATC TCTGATGTAG CCGAGTTTGA ATGTGATTCT GTTCCATCCG GCTTTCTCCA GAGATTTTTC CACTCAGAGG CGGACCTTCA ACGCCGTATC CAGGTTGAAC TTGACACTGT CAAAGATTCC CGGGATAAAA AGAAGAAGGA AAAGGAGAAG GCCTCCAAAG AGCCAAAGTC CGAAGAGCCC GTGGAGGAAG TCTTTGAAGA GGCTCCGGAC GATTTCATCA GAGATGATGT AAAACCCGCT ACTGATGGTG GGACGGTGTG TGTTGATAAA TCTACCGTAT CGAGAGAGTT GAGTTTGAAA GAGTACTCCA ATTATTGCCA ACGTCTCCAT GAAAACTCAC TCTCAAATCT TCGTCGAATC TGGCTTTTGG CCGGAGGTAA GGGCACAGTC ATCTCTAATA AGTCCATGTT GGAGACGTAT CATAGAGTTG ACTGTTTGAT AAATGCTCAT ATTGCCGGTT CGGGTTGGCT GTACCCAACT GAGCAGGAGT ATACCATCGG TTATAATGAC GATGGTTTGG GACCTAAACA GGCAGGGGAA ACCTTTATTG TTGACAAATC CTGTGTCATA TCAAACAATG CCAGTTTAGC CAAGGCAAGC CAAGGCTTGA AAGCTCCCAA ATGTTCTGTG ACCCTTTGCG ACGGAGTGGC TGGATGTGGT AAGACCACTG CTATAAAGAA CACGTTCAGC ATTGAAAAGG ATATTATTGT TACAGCAAAC AAAAAATCAG CTTCGGACGT TCGAGAGGCA ATCTTCCCTG AAGATCCTGA GGGAGAGATA GCCTCGAAGT TTATTAGAAC GGCTGATTCC GCTCTCATGC ACGGACTTCC GTCATGTCAG CGGTTGTTGA TCGATGAAGC GGGACTACTT CATTTCGGTC AAGTCCTGGC AGTGGCAGCT ATCTGTAAGG CAACGGAAGT TTTGGCTTTC GGTGATTCTG AACAGATTAG CTTTAAATCC CGTGACAACA CATTCCGTTT CCGTCATCAA AAGATAATAT ATGACAGGAG GGATGTGGTT ACCGTGACGT ATCGCTGTCC TCAGGATGTC GTCGCCGCCG TTGTGAAAAT GAAACGGCGA ACAGGTAAGT TGCGTGAGTC CAAATATTCC TCTTGGATTT CCAGGTCTAA AGTTGAGAAA AGTCTTTCGG CAAGACCGAT CTCTAGCTTG AATCAAATTG TCATTGAACC TCACAAGTTC TACCAGACAA TGACTCAGTC GGCGAAAGCC GCTCTGATGA CGAGGGCCAA GGATTTCCAA TTACCAAAAA GTTGGATTGA AGCGAACATT AAGACTGCTC ATGAGTCTCA AGGCATCTCT GTTGATCATG TCGTACATGT TCGTGATAAG TCCACTAAGT GTGATCTTTA TAAAGATGAG GAATACTGCC TTGTTGCTAT GACGAGGCAT AAGAAAACTT TCGAATATTG TTATAATGGT GAGTTAGCTG GTGACTTACT ATTACACAGT ATTCGTTCAT AGCCGTCTAT CGAACGTAAA TCGATAGTTT GGCGCTTAAG TCAAGTTCTA ACGGTTTCTT TAAACCGTAA TCGTGGTTGA CACGTCTTAG TTCTACAGAA CTATGAGTTG CCCTTGAGAG TTACTCCTTG CTCTCTTCGG AAGTTTCTTC GGAAACGTGC AGTGGCTGTC ATAGACAGCT TTTAGGCTGC GGGCAACGTC AGTTCCATAA GGAACTGATA ATCTCCAAAA GGAGACCA |
| Length | 7988 |
| Protein Sequence | |
| Protein Residue | |
| A.thaliana |
|---|
| AGI-code | |
| Description | |
| TAIR curator summary | |
| Alias | |
| Gene coexpression |
|---|
| MR |
|
| RNA-seq |
|---|
Seasonal expression (July 2011 to June 2013) |
|
|
| The four seasons |
|
|
| Growth Chamber expression |
|
|