Detail



ID : Virus3229

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionFreesia_mosaic_virus|plants|ssRNA
Sequence
ACTTATTAGA AATGGCGAGT ATTACATTCG GTAGTATGGT GACTGTGCAG CTCATCGATG GAAAAGTGGC AAGAACAATG TACCATGCTG TACGAGATGC ACGTAAGGAC GCACTGAAGA ACGTGAATGC AACTACAAAG CTCATTGGGA AAGTTGTTCC AATGTCACTC GAAGTTGCAA GGGAAAATGT GAAGCGAATT ACAAAACTAC GGAAACAAGA TGTGGAACGG CTTGTGAAAA GCCTTGTAAT TAAGAGGGCA AAAAATGGAG TGGGGCCTGA TCGGTTTGGA CTATGGGTGA GTAAGAATGG TAAGATGTTT GTTCATAGGG TCTCAACATG GGTGGGACAC CAATTGGGAA TGAAACTGCG CAGACAGAAA CAACAGGAAG ATTTTGTTGC AAGTAAAGAT CATGAAATAA CGAGGATTGA GTGCGACAAA ATCGGAGCTG AACCTGTGCA TGTGTCGTAC GAATCGATGC GCTCACCTTT CTGGCAGCGA ACACCTCCAA AGCAGGAAAA GCGAAAGAAG TCAGTTGCAC ACTATGGTGT TAATGTAATT GACAAACTCA CAAAATCTTT GATTAACATC TGCAGCCAAG AAGGGAAGCA GTTGGAAGTG ATTCTGCAGC GTAAAAGGAA AATAACTTGT ACGTACAAAA CATTTGGAAA ATCAGTGATA CCATCTGTTC GCTTACCGCA TGAAGAGTGT GGCACACGAA AGAAGCGGGA ATTACACCCA CAAATGTTTA ATGAGATAAT CACATTGTTA GCTAAAGGAC GGAAAATGCG TGACCATGTT GTGGAGCAAG ACATAACATT TGGTTGGAGT GGTACAATAC TACCCAGCAA GATACTTAAG TCTCGTCCAT ATCGATACGA TGAAGTAGTT GTGCGTGGGC GGCTCGAAGG TCAAATAGTT GACGCACGAA CTAAATTATC ATTCTTCGCA AAAGAAACAA TCACGCAATA TTCCTCATTT GAAGCGCAAT TTTGGAAAGG TTGGAAGCGG GCGTTTGACC AACTGGCTCC TAAAGAAACT CATACATGTC AAACTACAAT CTCGAACGAA GCTTGTGGGG AGATAGTGGC GGCAATTTTT CAGATGGTTC ACCCGTGTGC TAAAGTCTCT TGTACTACGT GTCGCGATCA AATTGGCTTG AGCAGCAAAG AGGAATATGC GGAATTGACA TCGCAAAATA TCCGACAACA TGATGAAATC TTTACAACCA TGAGACAAGC TTTCGCATCC GTTGATAGGG TGATGACACA TTTCGAGGCA AGTTCACTAT TGAATCTTAA TGTGAAGGAT TGCATGGAAG TGATCAGATT AGCACAAGAT CAAAGGGCCA CTCAATTGCA GCAACTCCTT GTGGTGAATA ATGTTTTGAT GAAGGGGCAT CTTTCAACCT CTGAAGAGTT GAGTGAAGCA AGCGCAAAAC TACTTGAAGT AGTTCGATGG TTCATGAAGC ACCTCAGTTT GGTTGCAGAA AGCTCGTTAA GCACTTTTAG AAATAAAGCG GCATCAAAAG CATTGGTCAA TCCTTCACTG CTTTGTGACA ATCAACTTGA TAAGAATGGC AATTTTGTGT GGGGAGAGCG TGGACGGCAT TCAAAACGCT TCTTTGGAAA TTATTTTGAG GAAATTATCC CAGGGGATGG ATATAAAGAT ATGTGGAGCG CAATCGCCAA ACTGCATCCG AAACTTGCCG TTGGAAATTT AATTGTTTCA ATGGACCTAG CAGTGGCCAG AAAAGCCCTA CTAGGTGAAT CCATTGAGAG GATGCCTGTA AGTGATAGTT GTGTTTCAAG AATGAATGGC GCATTTGTAC ACGTTTGCTG TTGTGTGACA AATGACGTGG GGCAAGCAGT TTATTCAGAT TTGAGGAGTC CAACGAAGAG ACATTTAGTA GTTGGAGCAT CAGGCGATCC TAAATTCATC GATTTGCCAA CGAATGACAG CGAGAAGATG TACATTGCAA AAGAGGGTTT TTGCTATCTG AACATTTTCT TAGCTATGTT AGTCAATGTG AACGAGGACA ATGCGAAGGA TTTTACGAAA ATGGTGAGGG ATAGGATTGT ACCCGAGTTG GGCACTTGGC CAACAGTGAT AGACTTGGCA ACTGCATGTT ATATTCTAAC AGTGTTCTAT CCCGAAACTA GAGGAGCTGA GTTACCACGA ATATTTGTTG ATCACGCAAC AAAAACGATG CATGTAATCG ATTCATTTGG CTCCTTAACA ACTGGGTATC ATATCCTGAA AGCTGGTACA GTATCTCAAT TTATTCACTT TGCACCAGAG CAACTTGACG CTGAGATGAG GTATTACAAT GTTGGGGGAG ACGCGAACAG CGGGCGGCGT ATGCGAATGG AAAGAGCACT CATTAAGGGT ATTTTTCGAC CTAAATTGTT AATGCATATA ATCCATGAGG ATCCATACAC CTTAATGATG AGTTTACTCT CACCATGTAT GCTTCTGAAT TTGTACAATG TGGGAGGACT GGAGGTGGCA ATGCGAGAAT GGATTGTAAA GGAAGCGAGT GTCAGTGCGA TTTTTGCAAC AATGTCGCGG ATGGCGGAAA GTGTGTCTCG AGCAGACATG GTGGTTGAAC AATTAATGGT GATTCGTTCA CACGCAGGTC ATTTTCTTGA ACTCTTGGCG AGCTTGAACG CGGGAATTCG ATTCAGAGAC GAAGTGGTGA ACGTATTAAC GATGATGTTA GCTCAGAGTG AAATGGACTC GGATTTGACA AAAAGTGGTT TCGTCGATCT TCGGATGCCC CTCTACGAAA TGCGGGAAAA AATATATGCA GGCGAATTAG ACAAGGAGTG GAGCGGCTTA AGCTTGTGGG AAAAATTTTA TTTAATCACT TTCTCGAGGA AATCACGACC TTCTTCTTCA CAGCCACTGC ACAGTACAAG GTCAGACGGT ATCGAAGGCA AATACGTCGC CTCACGCGAT TGGTTACTTG GAAAGATGAG ACAGAAGTGG TGTGGCATTC GCACTGGTGC TACCCAACGG ATGGAGGCGA CACTTGGTTT TTGCAAGCGT AATACCATAG GAAGTGTGTT GTATATAATT AGACGGTGTT ATAGAGATAT TTTCTACTTC GTCAATGTAA TGCTCATTGC AACAGCTGTT GTGAATTTCA TACATACCGT GCATAGAATA GTTCTAGAGC AACGTGAGAG TAAGATGGTA GCTAGGGTGT TGCAAAGTAG GATTGATTCA AATGTGCTTG GAAATATATA TAAGCAATAT GTTAAGGAAA AACAAGAAAC ACCAACAGCA ACTGAGTTCT ACGAACATGT TCGTGAGTCG AATGAGGAAT TGGCTGAGCG CGTGAAAGAC GAATTACTTT ACAAGGACAC AGTTACATAT CAAGGAAAAT CACCAACTGA GAAAAGCTTA GAACGGACAG TAGCAATGGT TGCATTACTG GCAATGGTTT TCGACACAGA AAGGAGTGAT GCTGTTTTCA AGATCTTATC CAAGATTAAA TCTGTATTTA GCACGTTAGG TGATGAAGTG AAATATCAAA GTCTTGATGA TATAGAGTCG ATTGAAACGG AAAAGAAAAT GACAATTGAT TTGGAATTGG ATACTGATGC TATTCCTGCG AGTGCGGTTA TGAGTGCAAA ATTTTCTGAT TGGTGGTACC CACAGCTTGA GCAAAATCGG GTTTTGCCAC ATTACAGGAT TGGAGGCGAG TTTGTAGAAT TTACGCGGAA GACAGCAACA AATGTGGTTT TGACAATTGA CACATCATCA AGTAAAGAGT TCTTGATCAG AGGAGCCGTA GGGTCTGGTA AATCAACAAA TTTACCGCAT TTGTTAGCAA GGAAAGGAAA AGTGCTACTA CTAGAACCAA CAAGACCTCT CGCTGAGAAC GTGTGCAAGC AACTGCGAAA GGATCCATTC AATGTGAACC CAACCCTGCG AATGCGTGGA ATGACGACAT TTGGGTCTTC GAACATAACC GTAATGACAA GCGGTTTCGC TTTACATTAT TACGCTCATA ACCCATCACT CATGGTGGAT TTTGACTTTG TTATGTTTGA TGAATGTCAT GCATTGGATG CTGCGGCGAT GGCTTTTTAT TGCTTACTCA GCGAGCATGG ATATCCAGGA AAGATTTTAA AGGTGTCGGC GACGCCACCA GGGAAGGAGT GTGAATTCAA GACGCAATTT GATGTCAAAC TCATTGTGGA GAATGATGTT TCATTCAAGA ATTTTGCAGA CAGCCAAGGC ACAGGAGCTA ATATTGACAT GACGAAGTAT GGAGATAACA TATTAGTGTA TGTGGCTAGT TACAACGATG TTGACCAACT TAGTGGCATG TTGCTTAATC ATGGACATCA TGTTTCAAAG GTTGATGGAC GCACGATGAA ATTAGGTCAT GTTGAAATTG CAACTAAGGG AACACCAAGC AAGAAGCATT TTATAGTGGC AACTAATATC ATTGAAAATG GTGTAACACT CGATATCGAT GTGGTAGTTG ATTTTGGTCA AAAGGTCGTT GCGGAGTTGG ATTGTGATAG TAGATGTATG AGATACCAGC GACGGAGCAT ATCATATGGA GAGCGAATTC AGCGGCTAGG TAGAGTTGGG CGAGTGAAAG ATGGTGCTGC ATTGCGTATA GGACACACTG AGAGTGGTTT GACCGAAATT CCGGCAAGCA TTTCAACAGA AGCAGCCTTC TATTGTTTTG CGTACGGGTT GCCGGTTATC ACACATAATG TGTCCGTGAG TTTATTATCG AATTGCACTG TGCAACAAGC GCGCACGATG ATGCATTTTG AGTTATCACC CTTTTTCATG GTGGAATTAG TTAAATACAA TGGTTGCATG CATCCAGAAG TGCACAGGAT ATTACAACCG TTCAAACTGA GGGAGTCGGA AATCGAACTA AACAAATTGG CAATTCCAAG CAGCGGTTTG TCACGGTGGA TAACTGTGGG TGAATATGGT AGAATGGGGA TACACATTAA CGCACACGAT GATGTACGAA TACCTTTTGC ATGCCGTGGA ATTCCTGATA GTTTGTATGC TAAGTTATGG GAGATTGTTT TAACTCACAA GCACGATGCA GGGTTTGGCA GATTGACAAG CGCTAGTGCT AGTAAAATAG CACATACGCT AACAACCAAC GTGGACGCTA TACCTCGTAC ATTAGCGCAA ATTGAGCAAT TGATTGAAGA GGAAATGGTG AAGAAAGCGC ATTTTGAGTC GTTGAGTGCA TCAATGACAA CAAGAAGATT CTCCCTTGGA GGTATTGTTG ACACAATTCG ACAACGGTAC ATGCGCGACC ACTCAACACA TAATATCGAA GTCTTACAAG CTGCTAAAGC CCAGATAATG GAATTTAACT CAGCTACTCA TGACTTTCAG AAGATATCAA GTCTCCTTGG ATATGGTTTT CTTGATACAG TGCAATACCA GGATAACAAA GAAGAAATCG GAAAACGTCT CGGACTCAAA GGACGGTGGA ATGGATCACT TTTAACGCAC GATTTAATGG TGTGTGGACT AGTTGCAATT GGTGGCTTTT GGATGGCATG GGAATATTAT GTTGCAGAAT CTAAGGATCT AGTTCGGTAT CAAGGGAAGG GTTTTCGTGG AGGAAAGCGA AGCACCCAGA AGTTAAAGTT CCGTGAGGCA CGAGATAAGA AGGTTGGTCG CGAAGTCTAT GGTGACGATG GAACAATTGA GCATTACTTT GGCGCGGCAT ACACATCGAA AGGTAAGCAA AAGGGCAACC ACACTAAGAA AGGAATGGGG CGAAAGAACC ATCGTTTTGT ACATTTTTAC GGATTTGATC CTGCGGAGTA TTCATTTGTT CGTTTTGTGG ATCCTCTAAC CGGCTATGCA ATTGATGAAT CTGTGACATG CGACATTTCA CTAGTCCAGG ATGAAATTAG CGAGGCGAGA AGACTTGCTC GTGAGAACGA CACAGAGCTT CCCAATGCGA TGCGAACACG GCCTGGTATT CAAGCATATT TTATGAAAAA CAACTCAAAC AATGCGTTGC GAGTGGATAT GACTCCGCAT AACCCACTCG CGATGGGGGC TAAGTCAACA TCGATAGCTG GCCATCCGGA GCGAGAGTTT GAATTGCGGC AAACTGGAGC TGCGCAGGTT GTTCAAGCCA GCGACGTTCC AAGCGTGCAG GATGATGTCG TGCGCACTGA ACATGGTCGT GGACGATGGG TATTTGATGA CTTGAATCTA AATCTAAAGG CAGTGGCGTG TGCAAACAGT CAACTAGTTA CTAAGCATGT CATCAAAGGG CAATGCCAAT TTTTCCAAGA GTACTTAGCA GCGCACCCCG ATGCGGCAAC ATATTTTGGA CCGCTACTTG GTCATTATAG GCCAAGTCGG TTAAATAAAG AGGCATTCAA GAAAGATCTG TTCAAGTATA TGGATGAAAT CATAATCGGA GAAATTGATG GTGAGGCATT TGAGCGTGGA TATGAGGATG TGTGCGCTCT ATTGCATGAC TTGAAGTTTG GCGAATGTCA GTTTATAACA GATCCGAGTG TAATACTTGA ATCATTAAAT ATGAAAGCTG CGGTGGGGTC TTTATATACA GGAAAGAAGA ACGAGTACTT TGAAGCGATG ACAGCGGATG AAAAAGAGGA AATGGTACTC AAAAGTTGTG AGAGATTGTA CAATGGTTGC ATGGGTGTTT GGAATGGTTC ATTAAAAGCA GAATTGCGGC CTCTAGAAAA AGTGGAAGCA AACAAGACAC GAACTTTTAC GGCGGCACCT ATTGATACAC TTCTTGGAGG TAAAGTTTGC GTGGATGATT TCAACAATCG ATTTTATGAA TTGAACTTAG CAGGTCCATG GACTGTTGGA ATGACGAAGT TTTACGGAGG ATGGGATAAA TTGATGAAGG CTTTGCCGGA AGGTTGGCTG TACTGTCATG CGGATGGTTC TAGATTTGAT AGTTCCTTAA CTCCATTTCT TATAAATGCA GTAATTAGGT TACGGCTAGA GATGATGGAG AGATGGGACT TGGGTTGGGA AATGTTGCAA AAATTTTACA CAGAAATAAT ATACACACCA ATTCTCACTC CAGACGGGAC GATTGTGAAG AAATTCAAGG GGAACAACAG TGGTCAGCCA TCAACAGTTG TGGATAACAC ACTGATGGTA ATTTTGGCAA TGCATTATAG CATGGAGAAG CAAGGATGGA AACGTAACGA ATCAAAGGAA CGGTTGGTCT TCTTTGCAAA TGGTGATGAC TTGATCATAG CAGTGAAACC TGGCTACGAG GGGATTCTAG ATTCTCTAGC AGTATCTTTC AAGGAGTTAG GTTTGATATA TGATTTTTCA GAGCGATGTC ACGATAGGCA GGAATTATGG TTCATGTCAC ATCAAGGACA TTTAATTGAT GGGATGTATA TTCCAAAACT TGAGCGAGAG CGGATTGTTT CTATATTGGA ATGGGATAGA AGTCATGCCA TCGAACACAG AGCAGAGGCA ATTTGCGCAG CTATGATTGA AGCATGGGGG TACCCTGATC TTCTTTTGGA AATCAGAAAA TTCTACGCAT GGATTCTTGA CCACGACATG TTTCACGATT TGGCAGCAAT AGGCAAGTTG CCGTATATTG CTGAGACAGC ACTGAGGAAA TTATACACAG ATCGTGATTG TGAAGATGAA GAGCTGTTAC ATTACCTTAG AGCTTTTAAC TTTGAAGGAG AGCTGGTGGG AACGGACGAG GTGCGATACC AAGGGAAGTC AATGTGCAGA GGGTTACGCA ATTACAATCC AGTCGCATCC TGTATTTGCA AATTAGTCAA TGATTCTGAT GGCATAGTCA CCACAATATT CGGCCTTGGA TACGGACCAG TGATTATCAC CAATGGACAT CTATTTAATA GAAACAATGG AACTTTGCAG ATAAACACAC ATCATGGTGT TTTCAGGGTA GAGAACACGA CGAAATTACA AATACACCAT GTGGAACGAA AGGATATGGT GCTCATTCGG ATGCCCACTG ATTTTCCCCC ATTTCCTCAA AGATTGAAAT TCAGGAGTCC AGTACAAGGG GAGAAAGCAA ACCTAATTGG ATCATTGTTT CAACAAAAGA ACATTTCAAG TGTTGTTTCA GAGACAACAT TAGTAATGCC AGCAAATAAC AGTGGATATT GGCGTCACTG GGTTTCAACA AAGGATGGGG ACTGTGGATT GCCCATGGTG TCAACATCGG ATGGGTACAT ACTTGGATTT CATGGGCTCA CAAGCACGAT TTCGGATCGC AACTATTTTG TGCCATTCAC GGATAACTTC GAAGAAGATG TTCTGCGGAA GATTGGAGAT CTTAATTGGA AACGACATTG GAAACATTCT GCAGATCTGA TAGCATGGGA TGGGATCAAG TTAATTGAAG AGCAGCCACA AAAGATTTTC AAAACAACCA AGTTGATTTC AAGATCTAGC AGAGCAAACA CACGACGAGG CTATGTATCA GCAACCAGCG CACCAGAGCA ACTTGACGCT GGGGCTGAGG CTGAGCGAAG GCGAAAAGCA AGGAGTGGGG AGACAGAGCA ACCAATTAAA GGACAGGAGC GCGAAATTGC AAAGAATAGC GAAAAGGACG TGGATGTGGG TTCACGAGCA AGCAAATCAG TGCCAAGGTT GGCAAAATTG AAGGTTCGAA TGAAGGTTCC AACAACAGCA AAAGGTCCCG TCTTGGATCT GGATCATCTT CTTGAGTACA AACCAGATCA AATTGATCTA TCGAACGCAC GGGCGACGAA GCAACAATTT GACGCCTGGT TCAATGGAGT GCAAAATGCA TATGAGCTGG ACGACATTCA GATGAAGATC TTGATGAACG GCTTAATGGT CTGGTGCATT GAGAATGGAA CCTCACCAGA TATCACGGGT GTGTGGACGA TGATGGACGG TGATGAACAA GTTGAGTACC CACTGCGACC CGTGATTGAA AATGCAAAGC CTACGCTGAG ACAAGTCATG CGTCATTTCT CAGACATGGC CGAGGCCTAT ATAGAAATGA GGAATGCAGA GAAACCCTAC ATGCCACGGT ACGGTTTACA GAGAAATTTG AGAGATTATA GCCTAGCTCG GGTCGCATTC GATTTTTACG AGATTACATC TAAAACCTCA GTTAGAGCTA GAGAAGCGCA CATGCAGATG AAAGCTGCAG CCGTCGCAAA CACTACGGCG AAGATGTTTG GTCTTGATGG TAATATCGGG ACACAAGAGG AAAATACTGA ACGACATACA GTCACTGATG TGAGTGCTAA TATGCATAGT CTGTTGGGTG TACGTCACAT GTAAAGTGTT TGGAGTATTT TCATGCTAGT ACTTATATAA CTATAGACGC TAAGTTTTAA GTGAGTGTTT CACTCCGTGT GGTAAGATAT ATAGTACTAG AAAACGAAGG ACTACAACTG TAGGAGGCTC TTGTGTGGCT ATGCCACGAA TGCGTCTTAC CTTTGTATAC ACCTTTAAT 
Length9489
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Ahg356864
4 Virus0598
5.2915 Virus3905
5.91608 Virus3888
6.48074 Virus3556
6.9282 Virus3786
7.34847 Virus3578
7.74597 Ahg949406 Protein of unknown function (DUF506)
10.9545 Ahg949369 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
11.225 Virus3098
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression