Detail



ID : Virus3303

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionHibiscus_latent_Singapore_virus|plants|ssRNA
Sequence
GTATGTTTTT AGTTTGAACA TTTCAACAAC ATTCAACTAC GAAACAGCAA CAACAAATAT GACTACAGAC ATTAAACAAC AAATCACAAA CGTACGCGAC GACGCATGCC AAGGGGCATC GTCGTTAATT AAAGGTTTGG CCACCCGTCG TGTGTACGAT GAGGCGGTAC AAACCTTAAC AGTGTTGGAC AAAAGGCCGA AATTCACCTT TTCTAATATG GTTACAGCCG ATCAGGCGAA ACTTGTCACT GAGGCTTACC CCGAGTTTAA TATAAGCTAT GTGGGCAATA GGAACGCCGT CCATTCACTG GCCGGAGGAT TGAGGAAGTT GGAAATGGAA TATTTGATGA CACTCGTTCC TTACGGTTCT CCTACCTATG ACATAGGAGG AAATTATGCG CAGCACCTTT TGAAAGGACG ATCATATGTT CACTGCTGCA ATCCTTGTTT GGATTTCAGA GATATAGCCA GAAACGAGAA TTACAAGGAG ACTTTGGATT CATATCTGAA GCGGTTCACT ACGCCAGATT GCGGTTGGTT CTCCGCGGCG TGCAGAAAGG TTACTGCAAG ACCTTTGCCT TATTTTCAAC AGGATGCATT CGAACGGTAT AGACAAAATC CGAAAGACGT CACCTGCTCA GAACCCTTTC AGGATTGTTG TATGCAACCC CCTAGTAATC AGGATTGTTT TGCAATTTCT GTGCATTCAC TCTATGACAT TCCTGTCGAT GAATTGGGCG CGGCACTCTT AAGGAAGAAC GTAAAAACTC TTTACGCACT CCATTTCTCC GAGGAGCTTT TAATGGGCGC AACTGAAGCG CGACTGGGCA CGACTGGTGC AAAATTTTTC CGGGAGGGTG ACGAGGTCAC ATTCGGTTTC GATGGTGAAT CCACCCTTCT TTACACGCAC TCCTTTAAAA ATATTTGTGC TTATATTACT AGGAGTTTTT TTTATGCAGG AGCTAGATTT GCTTACATGA AAGAATTTTT AGTACGCCGT GTAGATACTG TCTATTGTAA ATTTATTAAG ATAGACACGC AGTGTTTATA TAAGTCCGTA TTCCATACTG ATATCGATAA CGAAAATATG ATAAAAGGTA CGGATGAGGC CTTCATGTAC AAACGAGAAG CCGCGTTGTT GAACGCAGCA AGACCTATTT TTAAGGATAA GGCCGCTTTT CGTGTGTGGT TTCCCAATTC TGTAGGAAAA GTGATATACC CTTTTTTTAA AGGTAGTTCA TGTACATCCG CCAAGGTAAA GGTGGAAAAA AGACTGGTTG ATGAAGACTT TGTCTTCACT GTGCTAAATC ACATCCGCAC CTATTCCGGC AAGCAACTGT CATATGAAAA TGTTTTATCG TTTGTCGAGT CCATCCGATC GAGGGTGGTA GCTAACGGTG CTAACGTGCG GTCAGAGTGG GATATCCCAA AGTCTGAGAT CCAAGATATC GCCATGTCAT TGTTTTTGAT CACACGGTTA AGAACTCTGC AGGACAGTAA TGTTCTTCAG CAGTTTTCGG TCAAGGGCAA GAGTCTGACA GATCTCGTGA AGGAGGCCCT AGGGGGTCTT GTCGGTTCGA TGTTTGAACC ACTGACTCAA GTTTGTATAG ACCGGGGTTG GTTTAAGTTA GCAGAGCACA CTTTAAAAGT GGAGGTGCCA GAGCTTTCTC AAACCTTCGA GAGTTATATG CAAACGGAGT TTAGTGAGTC GAAAGCAATC GAAGCACTGG ACGTCTGGAG CTATCTGGAT GAGAGCAATC AGCTTTACAC CCATGTCTCA AAATTGATGG AGAAGTATAC AATGCCTGAT TTTGATGTGG AAAAATTCAG GGAGCTCTGC GCGCTACTAA AGGTGGGACC GAACGTTATA TCAACGGTCA TTGAAGCAGT TCTTGATAAT TCACTAGGCT TCACAATTGT TGGTGGGAAA CCCGAGCATC AATATTCTGA TGAGATGAAG GCCGCTGTCG CCGTAAGTTC TGAGTACGGA AAAGGGAAAG AATATGGCAA CATCGCCGCT GCGGCTAGCA CCTACACACC TGAAGGCCCG CTTAAAAAGG AGTGGGTTAA AAAAAACGCT GTGCAAATGC CTCTACAGGC TACAACGGAG AAGGTTCAAC GCTTTCATTT GAGCGAGGAG AGCGAGCATA TTAACGTGGA AAATCTGCAC ATGGTCGACA CCAGCGTGTT CACCAAGGCA AAAGCTTGCT TACTCTACAC AGGCACGTTA AAAGAGCAGC AGATGAAGAA TTACTTAGAT TATCTCTCAG CATCTATCTG CGCCACTATA AGCAACATCG AAAAAGTCCA ACATGATTAC TGGACAACTG GTACTCAACA GTATCAGTCC TACGGTCTGT GGGATGTGAA GAAAAAGAAA TGGGTGTTGT GTCCACCCAC GGCAGGTCAT GCATGGGGGG TCGCGGCTAT CAAAGGCAAG CATCACATTG TGATGCTCAA CTTTGACGGT AATGATCAAC CTATCTGTGA TAAGGAGTGG GATTTAGTTT GTGTCAGCAA TGATACAAAA CTATTTTCCA CTATGAAAAT TTTGGAAAAC CTGCAGGGTT GCAAGATACA GGAACCGAAG GCAAAGATAA CATTAGTGGA TGGGGTTCCG GGATGTGGAA AAACTGCCGA AATCTTGAGT AAGGCAGATT TCAAGCGTGA TCTGATTATC ACGCAAGGAA AACAGGCAGC CGCTATGATA AGAAAAAGGG CAAACGCCAA TGATCCTACG AGACCAGCAA ACAACGATAA CGTGAGAACG GTGGATTCGT TTTTAATGAA TCCGAAACCA TTTGAATACA AAGTCTTGTG GATCGATGAA GGGTTAATGC TGCACACTGG TGCAATCAGT TTTTGCGTCG CACTGAGCCA TTGTGAACAG TGCTACGTTT TTGGAGATAC GCAGCAAATT CCCTTTATTA ACAGAGTCAT GAATTTTGAT TATCCGAAGA CCTTGCAAAC GCTGGTCACG GATTCTGTAG AGAAACGGCG GATTACATCG CGGTGTCCGC TAGATGTGAC CTGTTATCTG GCGCAGAGGT ATAAGGGACC CGTGGTGTCA ACGAACAATG TTGAAAGGTC CCTTGACACA AAGCTCGTGG CTGGTGCCGC TCGCTTTGAA CCTCAGCTTA CACCATTACC GGGCAAGGTA ATAACTTTTA CCCAGGCTGA TAAAGAGACA CTTAAAAAAC GCGGATATCA AGATGTGCAT ACTGTGCACG AGGTGCAAGG TGAGACCTAT ACTGAGGTGT CGTTAGTGCG TCTCACGCCA ACACCCCTGA GCATTATTTC GCCTGACTCT CCTCATGTAT TAGTTAGTTT ATCTAGACAT AAAAATAGGT TAGTTTATTA TACCGTAGTT AATGACTGTA TTACTTATGC TATAGGTGAG TTAGCTAAGT TAAATAATTT TATGTTTGAT ATGTATACTG TGGAGAATCA GAAAGCATAG CAATTACAGC AGCATCGCCT CTACATCCAC AAAAACATCT TTTGTCCTAC TCCTAAAACC GGAACCATTT CTGACTTACA GGAGTATTAC GATAGGTGTT TACCTGGGAA TAGCTTCGTC CTTAATGATT ACGATCGAGT GTGTATGAGA CTCGTTGACA ACACGTTCAA CGTTGAACCA TGCACACTGA CTTTGAGTAA AGCTGACCCT GTGGAGGCAG AGATGCGATT AAATAGCAAG AATTTTTTGA CTCCATTGTT GCGGACTGCC GTGGAAAAAC CCAGGGTGCC TGGGTTGTTG GAGAATCTCG TTGCTTTAAT TAAGAGGAAT TTTAATTCCC CTGATTTGGC TGGGATAATC GACACCAAGC AGGTTGCAAC TAATGTAGTC GATAAATTCT TTTCTGATTA CTTTACCGTA GAAGGTTTAG ATCATATAAA TAGATGTAGA AATAATAAGT TTTTGTATAG TAAAGAGAAC CTTTCTGTAT GGTACGATAA ACAGCAGCCG CAGTCCATTG GGCAGTTGGC TAATGCTGAT TTCATAGATT TCCCTAGTGT TGATGAGTAC AAGCATATGA TCAAGACTCA ACCCAAGGGA AAACTTGACT GCAGCATTCA ATCTGAATAT CCTGCCCTAC AGACTATAGT GTATCATAGT AAACATGTAA ATGCTATTTT TGGTCCTATT TTTAGTGAAT TTACTAGAGT GATTTTAGAA TCCTTAGATA CTAACAAATT TTTCTTTTAT ACTAGGAAAA CTGTAGAGGA CTTGGAGTTG TTTTTCAGCG ATCTTTCTGA TTCAAGCGAC ATGGATGTCC TGGAGCTTGA TATAAGCAAA TATGATAAAT CGCAAAACGA TTTCCACTTC TGTGTGGAAA TGCTGATTTG GGAACGTCTC GGTATAGACA ATTTTATCAA AAGTATTTGG GAGACGGGCC ATAAGAAAAC AACTCTGAAA GATTATCAGG CTGGTATAAA AACTATAATT TACCACCAGA GGAAAAGCGG TGACGTAACT ACGTTCATCG GTAACACCTT AATCATCGCT GCATGCGTCA GCTCTCTATT GCCGGTTAAA TCGGTAATTA AAGGCGCGTT TTGCGGTGAT GATTCGGTAT TATACTTTCC GAAGGGGGTA GATTTAACCG ATGTACAAGC CAATGCTAAT CTTATGTGGA ATTTCGAGGC AAAACTCTTT AAGAAAAAAT ACGGCTATTT CTGTGGTAAA TACATTATTC ACCACTCTAA TGGTTGTATA GTCTACCCGG ATCCACTGAA GCTGATACAG AAACTAGGTA ACAAATCTTT AACTTCTAGG GAACACGCCG AGGAATTTAG AATATCACTT TGTGATGTTT CAAAGTCCCT TGGCAATTGC GCATATTTTG ATTTGCTGGA TAAGGCCATT GCTGAAGTGT TTAAAGGAGC AGGTGGCGGT TCGTACGCTT TCAAATCTTA TTGGAAACAT ATAACCAACC CCGGTCTTTT TAAAACCCTT TACGATGAGT CTTAATCTGG CTGACCCAAT GAAGTTATTA GATGAGTCGA CTGTGTTTAA AACTAACATT TTAGATAGGT TTAGGGGTGG AATGAAAAAG AACTTGAAGG CCTGCAACGT CGTCGATTGC GACGTGGCTA AGCTTTCAGG TAATGGTCAG TCACTATTTA GTGTTAACCT TACTTCTAAT TTAACTTTAG AACAAAAATC GTATAAATAT GTACATTTGT TAGCTATAGT AATTTCTGGT AAATGGCATC TGCATAACAC GGTTGGTGGT GGTGCGACTG TAGCTTTGTT AGATAAGCGT ATAACAAATC CACAACAAGC TCAGTTGGCA AAGATGGTTG TGGCTGCGAA GGTAGGGGAG TTTCAGGGTA GGCTTACGCC AAATTACTCT GTTACTCTGG AGGATGCTCT CAAAGACCCG TGGGAAGTCT TCATAAGCAT TAAGGATGTG CCGATAGAAC AAGGTTTTCA TCCTTTGTCA GTTGAGATTG CAGCATTACT AATGTTTTCA GACATTTGTA TACTAAAGTC TCTACGGGCA AAGATGATAG AATCACAAAT CGGTTTTACT GATGGAACCG ACGGCGACAT ACCTTCTGAG AATATGGATG CATTTGTACA GAGTGCTTCT ATAATGCAAG ATTTGAGAAG ACTCAGGATG GCCAATAATT CTCTTGGAAG TGGTGTAATT GGGGGTAGAG ATAAGAAAGG GAAAAAGTTT GTAAAGGATT TTAAGAAGAA AACTGTGGTT AGTGATAATT CCGATACTGA TTTTTCAGGA GCGGAGAGTT CGTATACTAC AGAATTCGAC TCAAGATCAG AAACAAGCGA TGCCTTACCT TAATTTGACA CCTTTGAATT TAATATATAC TAGTGGTACT TTTGCTCCTT ATGATGTATT TCTGGAGATA TTGGTAAAGT CGCGATCAAA TAGTTTTCAA ACCCAAGCAG GGCGCGATAC TCTGAGAGAG CAACTTATTA ATTCTTTACA GATAGTAGCT AATTTGAATA CTCGTTATCC ATTATTAGGG TTTTATGTAT GGGTTAGAAA TCCCACACTT GCGCCTGTAT TCGAAGCTCT TCTTCGTGCA ACGGACACAA AGAACAGAAT CATCGAGGTG GAGGAGGAGT CTCGTCCTAC CACGGCGGAG ACTTTGAATG CAACGCAGCG TGTGGATGAT GCTACCGTAG CAATTCATAA AGAAATAGAT AATATATTAC TATTATTACA GGGTGGTACT GCAGTTTATG ATAGGACGGC GTTCGAGGTC GCTTCAGGTT TATCCTGGGC TGATCCTACA ACAACGTCTA CTACAACGTA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAAA AAAAAAAAGA GATGAGTCGA GGTATCGGGT TGTCGATGGC GGGTGCCGCC TAGACAATGG CTCATTGCTT TCCGAGGGAG GTTCGAATCC CCCCTAACCC CGGGTTGGGG CCCA 
Length6474
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
2.44949 Virus3250
3.4641 Ahg314552 Mannose-binding lectin superfamily protein
3.87298 Ahg915739
4.89898 Virus1519
6.9282 Ahg497332
13.5647 Ahg338690 photosystem II reaction center protein B
13.6015 Ahg905915
17.0294 Virus3291
17.4356 Ahg915504 PQ-loop repeat family protein / transmembrane family protein
22.2486 Ahg946639 S-protein homologue 1
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression