Detail



ID : Virus3356

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionIranian_johnsongrass_mosaic_virus|plants|ssRNA
Sequence
AAAACAACAA GACTCAACAC AACACAACGG AACACGATCA GACACACTAG TATCCGAGCT TTCGCACGAC CAGATTGAAG TTCACGGCTA ACTTGCACGG CGCAGTTAGA GAACTCTTTG GTTTACTTGA CACACCAGCA GGCATGGAGG GAGCATGGAA GAAAGTGGTT CGCAGCCGTA GGCCAGACAT TGATAGTCCG CATGGAATGA GGAAGGCAAT GGAACGATTT GCCGCAAAAC ATCAAGTGTA CGACGAGCAA AGAGCCTTAG CTCACAACAG TAAGATCCTT AAAAAGACTT ACTTGCCGCC TGTCGTAGTT GAACAACCAC CGGCCAAAAA GGTTTTGAAA CGTGAATGGG TTGAAAAATG TGACAATAAT CCTACATGGG ATTTAAAATA CCCACGTTTC AATGGTACAG TTTGTACGCG CAAGGAAGCT ATCGCAACAA CAAGCGTAGC AAAGCTTATC CAAAAACTTT TGCGCATTGG TACTGAAACA GGATTAAACA TCCAGATAAT TGGGAAGAAG CGTCAGCGCA AAACAAATGT ATCTACTGTT ACGAAAAAGA CGCGAAGATT CCTGCATTGT GAAACACGCC ATGAATCGGG AGAGTATAAA CGTATTGATT CAAACCTTGA TTCATTTTGG CTTGACAAAA TGCAAGAATT AACTATGAAA TACGACAAAA TGGATGAGAG TTTATTTGCA AATCTCCATA AGGGGGACAG TGGGTTAACT TTTATGAAGG ATGGCAAACT GTTCATAGTA CGCGGTAAAC ATAACAATGA AATCATCAAC AGCTTGGAGT CAACCTTGAG TGTTAGAGAG ATCACACATT ACAATGACCC ACAAGCAACC GAATTTTGGA GGGGATACAC AGACGCGTAC GTTGCTAATA GGAGTGAATC GTCGACGCAT ACACAACACA TACCGACCAT CGGTATTGAG GAATGTGGAA AACGGATGGC ATTGTTGGAA ATCTTATTTC ACTCAACATT TAAGATAACT TGCAAGCACT GCAACAACGA TGACCTTGAA TTAGCAGACG AAGAATTTGG AGAAAAATTG TATAAGAATA TTCAGCGACT TGAGAACCAG CAGAGCGAAT ATCTAGCGAA AGATCAGAAA CTTAAACGGA TGCTAGAGTT CGTGAAGAAG AGGTGCAATC CAAAGTTCGA ACATTTGCCA TTAACATGGC AAATCGCTGA AACCGTAGGC CACTTCAATG ACAATCAATC AAAGCAAATT ATGGATATAA ACGAAGCCTT AATTAAAGTT AATACAATAA CCACTGAAGA AGCCACAAAA GCGAGTTTGG CTTTGTTGGA GCTATCCAGA TGGTATAAAA ACAGAAAAGA AGCATCAAAA ATGGACGACT TGAGTACATT CAGGAACAAA ATTTCACCCA AAAGCACAAT CAATGCAGCT TTGATGTGTG ACAATCAGCT CGACCCAAAT GGAAACTTTC TATGGGGAAG ACGTGAATAT CACGCAAAGA GGTTTTTCAC CAACTATTTT GAAGTTGTTG ATCCAACGGA TTCATACGAA AAACACGTCA CGAGATTTAA TCCAAATGGA CAGCGGAAAT TATCCATTGG GAAGCTAGTG ATACCACTAA ACTTTCAGAA GGTGCGTGAC GAATTCACGG GGATTTCAGT TTCACGGCAA CCAATCTCCA AAGCTTGCGT GAGCCGAATT GATAATGCCT ACATATATCC ATGCTGTTGC GTTACAACAG AGTTTGGACA ACCAGCATAT TCGGAAATTA TACCACCAAC GAAAGGCCAC ATCACCATAG GTAATTCAGT TGATCCGAAA ATTGTTGATC TACCACAGAC TGATCCGCCA AGCATGTACA TAGCAAAGAA TGGATATTGT TATCTAAACA TATTCCTTGC AGCTATGATT AATGTAAATG AAGATTCTGC AAAAGATTAC ACAAAATTTC TCAGAGATGA AATCATTGAA AGACTTGGAA CATGGCCTAA ACTCAAAGAT GTTGCAACGG CTTGTTACAT GCTTTCAGTC ATGTATCCAG AAATTAAGAG CGCCGAGATA CCACAGATTT TGGTAGATCA TGAGCATAAG ACAATGCATG TTGTTGACTC GTATGGCTCT CTTAGCACAG GATTTCACAT ACTCAAAGCA AATACAGTTG GACAACTCAT CAGAATGATG TACGACTCTA TGGAAAGCGA AATGCGAGAG TATGTTGTTG GAGGAACTCT AACGCACAAA TCTTTTAACT CTCTTCTTGG CATGTTAGTG AAAAACATGT TCAAACCAGA TGTTATAAGA CAGGTGATAA TCGAAGAACC GTTCTTATTA ATGATGGCAG TTTCATCACC AACAGTGTTG ATTGCACTGT ACAATAATTG CTACATTGAG CAAGCGATGG CTTATTGGAT TGTTAAAAAC CAGAGCATTG CGGCCATATT TGCACAGCTT GAAGCACTAG CCAAGAAAAC ATCGCAAGCA GAATTATTAG TTCAACAAAT GACAATTCTT GAAAAAGCTT CAAGTCAGCT TAGATATGCA GTCATGGGTG TCAGTCACAT AGATCCTGCG AAGCGTTTAC TATGGTCACA TCTTGAGGCA ATGAACACAC GATCGGAAAT GAATAAAGAA CTCATTGAAG AAGGCTATGC TCTCTATGAT GAGAGATTGT ATGCAATGAT GGAAAAAATC TACATCGATC AGTTAAATCA TGCATGGGCA GAGTTATCAT ATACTGGAAA ATTTTTAGCA ATATTGCGTG TGTACAAGGT CAAGAAGTAT TACAAGCCAT CATTAGTCCT GAAAAGAAGC GTCGATTTAG GCGCAACTTA CAATATATCA GCTACGCATC TAATATCAAA TTTAGTGCAG AAAAGTCGCA CTCAAGTCAG CTCTACTTTA ACCAAACTCC ACCAAGGTGT TTGCGATAAA ATTGAAAAAG TGCGGTTGCG TACAGTTCGG ACTGTTTATT GGCTGATCCC TGACATATTT AGACTGATTC ATGTAGTCTT AGTATTAAGC ATCCTAACAA CAGTTGCAAA TACGATAATT AATATAGTTC AAGATTACAA AAAGCTACAA AAACAAGTCA GAGAAGAAGA ATATGAACGT GAAGTCGAGG AAGTACGATC AATTCATGCA AAGCTGATGA AAATCCATGA TGACTCATTA ACAAGGGAGG AATTTCTAGA ATACATTCGC GAACATCATC CTCGCTTAAT AGAGGCCACT CTAGACCTTA CAGGAGTTGG TGTAATACAC GAAAACAAAT CTCGCTTGGA GACAAATTTG GAACAAGCGA TGGCATTCGG AACACTCCTA ACCATGATTT TCGATCCGAA CAAGAGTGAC GCAGTATTCA AAGTTCTGAA TAAAATGAAA ACAGTCATTA ACACGTTCGA GCAGAATGAA ACATTCCCTC GAATTGACTT CACATCAATA TTCACCACTC CAGTAATTCA CCAAAGTGCG GATGTAGACA CACCATTAAT CACGAGCACA GAGAAAAATC TAACAATCGA TTTCGACACA TCACATGATC TTCCAGCCGA TACGTTCACA CACGACGTAA CATTTGACCA ATGGTGGTCG AACCAATTAG AAAACAATAG AACAGTCCCC CACTACAGAC TTGGGGGAAA ATTCGTGGAA TTCACAAGAG AAAGAGCAGC CATTGTAAGT GTAGAGATAG CTCATGATCA AATTGATAAG GAATTCTTGC TTAGAGGCGC TGTTGGGTCT GGAAAATCAA CAGGTCTACC ATATCACTTG AGCCTTAGAG GAAAAGTGCT AATGCTCGAA CCAACTAGAC CTCTCGCAGA AAACGTTTGC AGACAATTAC AAGGAGCACC ATTTAATGTT AGTCCTACAC TACAAATGCG TGGCTTAAGT TCATTTGGTT CAACGCCTAT ATCCATAATG ACATCAGGTT TTGCTCTGCA TCTGTATGCA AACAATCCAG ATAAGCTAAA TGGTTATGAT TTCATCATTT TTGATGAGTG TCACATACCA GATGCGTCGG CAATGGCATT TTATTGTCTC ATCAAAGAGT ATGATTTTAG CGGTAAGATC TTAAAAGTGT CAGCAACACC ACCAGGAAGA GAGCTTGAAT TTTCCACACA ACATCCTGTG GAAATATATA AATGCGAAAA TTTAACACAC AGCCAGTTTG CAATGGAATT AGGCACAGGT TCACTAGCCG ATGCAACCAA GTACGGAAAT AACATCCTAG TGTACGTGGC AAGCTACAAT GAAGTTGATT CTTTAGCACG AGCGCTTTCT GAGAAGCATT ACAATGTCAT AAAAGTTGAT GGAAGGACAA TGAAACATAA TGTAAATGGC ATACAAACAA ATGGAACAGA TACGAGAAAG TGTTTTGTCG TTGCAACCAA CATAATTGAG AATGGTGTCA CGTTAGACGT GGATGTCGTT GTTGATTTCG GTTTAAAGGT GACGGCTGAT TTGGATGTTG ATAACCGTGC AGTGATCTAC AAGAAAACAA ACATCTCATT TGGTGAGAGA ATTCAACGAC TTGGTAGAGT TGGAAGAACA AAACCTGGTA CAGTCATCAG AGCGGGGATA ACTATGAAGG GAGTTCAAGA AATACCATCA ATGATTGCAA CTGAGGCAGC ATTTTTGTGT TTCGCCTATG GACTCAAGGT CATAACACAC AATGTGTCAA CTACTCATTT GGCTAAATGC ACAGTTAAAC AGGCGCGAAC TATGATGCAA TTTGAGTTAT CTCCTTTCTT AATGGTCGAA TTGGTCAAAT ATGACGGTTC ATTGCATCCA CAGATACATG AGAAACTGAA GAAGTTTAAA CTTAAAGATT CAACCATTAT GCTTCGACCA AACGCTTTGC CATATACAAA CGTTCAAAGT TGGTTATCGG CACGAGAATA TAACAGAACT GGTTGCAATC TTGAACTAGA AGATTTTGTC AAAATCCCAT ACTATGTTCG AGACGTCCCA GACAAGCTTT ACGCAGATAT TTACGAAGTC ATAGTCAAAT ATCAGTCAAC AAACTGTATG GGACGTTTAT CGAGTGCGTG TGCTGGCAAA GTGGCGTATA CTCTCCGCAT TGATCCCCAT GTTTTACCAC GCACAATAGG CATTATAAAC GCACTTATCG CAGAGGAATA TGCAAAGAGA GATCATTACC ATGCAATTAG TGCAAACCCT TCCTCGTCAC ATGCATTTTC ACTTAGTGGA ATTATATCCT GTATTTCGAC GAGATATATG AAAGACTACA CAAAAGAGAA CATTGAAAAA CTTGTTAGAG TTCGTGACCA ACTCCTTGAA TTTCAGGGAA CTGGTGCGAA TTTCAAACAA CCGGAAGACT TGATGGAATT CGGAGCTTTG AACACAGTTA TACACCAGAG TACTGAACAG CTTTCACAAT GCCTGGGATT ACAAGGACGC TGGAATTTGC CATTAATCCA ACGCGATCTT TTAATAGCAG CGGGTGTTTT CTCAGGTGGA GCACTAATGT TGTGGTGTGT TTTTACTAAG TGGGCCAAAG AAAAGGTCAT TCACCAAGGG AAAAACAAAC GATCGAGGCA GAAGCTCAAA TTTGTGAAGG CGCGGGACGC TAAATACGGA TACGCTGTGA CTGGTTCGGA TGAATGCATC GGAGAAAATT TTGGAACGGC GTACACGAAG AAAGGAAAGC AAAAAGGGAC AAAAGTCGGT CTCGGAGTGA AGCAACACAA ATTTTACCAC ATGTATGGTG TTGATCCGCA AGATTACAAC ATGATCAGGT TTGTTGATCC TTTGACAGGA ACAACCCTAG ACGAACAAAC AGTTACCGAC ATGAAACTAG TGCAAGAACA CTTCGATGCA ATTCGCGAGG AAGCTATTAA CAATGATTTA ATAGAGAAAC AACATGTTTA CTCAAATCCA GGTCTTCGCG CGTTTTTCAT TCAAAATGGT TCCACTAATG CACTCAAAGT AGACTTAACA CCACACGAAC CTCTCAGAGT TGTGAAAGGC AACAATATAG CAGGATTTCC AGAACAGGAG GGGAATTTAA GACAAACCGG CGCACCAGTA TTAGTCCCTT TGTCACAAGT GCCAGAAGCA AACGAAGAAC TCGTCTTACA TGAAGCGAAA TCAATGATGA TGGGACTAAG TGATTTCAAC CCAATTTCGC GCCACATTTG TGTCATTGAG AATGACTCCA ACGGGGTTAG GATAAATGTC TACGCAATTG GATTTGGCTC ATATTTAATC ACTCCCGCGC ATTTATTCAA ACACAACAAT GGAGAGATTA CAATCAGATC ATCACGTGGT GTCTACAAAA TTCGCAATTC AGTAGAGGTC AAACTACATC CGATCACTGG GAGGGATATG GTTGTAATGC AATTGCCCAA GGATTTTCCT CCATACCCAA AGAAAATTAA CTTCTCACAA CCTTGTGTCG AGGATCGCGT TTGTATGGTA GGTGTGAACT TTCAACAGGA GTACTCGTCA TGTGTCATCT CTGAAAGTAG TGTTACTGCA CCTAAAGGCA ACAGCAGCTT CTGGAAACAT TGGATTTCAA CCTCGAATGG CCAATGTGGC TTACCACTCG TGAATGTCCG AACGAAAGAT ATCGTGGGAA TACATAGCCT GGCTTCAACA AACAACACAA CAAATTTCTT TGTAGCTATA CCAGCTAATT TCTCAGAATA CTTAAACGAG TTGTCGGAAA CAAATAAATG GGAGAAAGGT TGGCACTATA ATCCAAACTT GATATCATGG AGTGGACTAA ATTTAGTTAG TGCAGCGCCA TCTGGATTGT TTAAAACATC AAAACTCGTC GAGGACTTAT CCGACGACGT GTCGGAACAG TGCAAAGTTC AAGAAACATG GTTAACCAGA AACATTCAAA ATAACTTGCA AGTGGTGGCA AAATGCCCAG GGCAGTTGGT AACCAAACAT GTTGTCAAAG GTCAATGTCC ACACTTCAGT TTGTATCTGT CAACCCACGA TGATGCAAGA AATTTCTTCA AGCCACTGAT GGGAGCCTAT GACAAAAGCA GACTAAATAA AGCAGCTTTC ACAAAAGATC TCCTCAAATA CTCAAAGCCA ACGTATATAG GAGAGGTAAA TTATGAACTG TTCGAGAAAA CCGTGAAGCG AGTTGAAATG ATCTTACGAC AAGCTGGCAT CCAACAGTGC GTTTTCGTAA CAGATGAAGC TGAAATTTTC AAGTCACTAA ACATGAACGC AGCCGTCGGA GCCCTTTACA CGGGAAAGAA GAAAGAATAC TTCGAATCGT TTACAGAACT TGATAAGGAA GAGATCGTTA AGCAATCATG TGAACGATTA TACAACGGTC AGCTCGGAGT GTGGAATGGA TCTCTAAAGG CTGAAATTAG ATCTATTGAG AAAACTTTGG AAAATAAGAC GAGGACATTC ACAGCGGCAC CACTCGAGAC ACTTCTCGGA GGAAAAGTTT GTGTTGATGA TTTCAACAAT CAATTTTACG AACACCATCT CGTAGGTCCC TGGACTGTAG GAATCACTAA GTTTTATGGA GGTTGGAATC GTTTGCTTGA AGCGTTACCA GATAACTGGA TATATTGTGA TGCAGATGGT TCACAATTCG ATAGTTCATT GACCCCATAC CTCATAAATG CTGTTTTACA AATCCGGTTG AATTTTATGG AGGCATGGCC GATTGGTGAA CAAATGCTGA AAAACCTTTA CACAGAAATT GTCTTCACAC CAATAGCAAC ACCTGATGGA TCAATCATCA AGAAGTTTAA AGGGAACAAC AGTGGACAGC CATCAACAGT TGTGGACAAC ACTATTATGG TCATATTAGC ATTTAACTAT ACGCTTCTTG CGTGTGGTGT GGAGGCAGAT ATGATCGACA GCATGTGTAA GATGTTCGCA AATGGAGACG ATTTATTAAT AGCCATTCAC CCAGACTTTG AACATCTTCT TGATGAATTT CAAAAACATT TTGGTTCTCT CGGACTCAAC TTTGACTTTT CATCAAGAAC GAGAGACAAA TCAGAATTGT GGTACATGTC GACGAGAGGC ATCAAGATAG ATGGAATGTA CATACCAAAG TTGGAGAAAG AGAGAATAGT CGCCATTCTG GAATGGGATC GCTCAAAGCT TCCTGAACAC AGACTTGAAG CCATATGTGC GGCAATGATC GAAGCATGGG GTTATCCAGA CTTACTCCAT GAAATACGTA AATTTTATGC ATGGCTTCTC GAAATGCAAC CATTCGCAAA TCTCGCAAAG GAAGGGAAAG CACCCTACAT AGCCGAAACA GCTCTCCGAA ACTTGTACAC AGGAAATAGA GCTAAGGAGG ATGAAATTGA GCGATATTTA CAACAATTCA TTAAGGATCT ACCAGGATAC GTTGAAGACT ACAACGAAGA TGTTATCCAT CAGAGTGGAA CTGTTGATGT TGGTCAACAG AAGTCACAAA CAGACGCTCA GGACAAAGAA ACGGGTGGAT CAGCAAATAA AGATAAACAA AACAAAGAAA ATGAAGGTGG AAAGGCAACA CAAGATGGAA AAGACAATAC AGGAGCCTCC ACCAATAATT CACAAAAGAA CGATGGAAAC ACATCACAAG GAGGAAAGAA GGATAAAGAC GTTGACACAG GAACGACAGG AACAGTCACT GTTCCAAAAC TTAAGGCAAT GACAAAGAAA ATGCGCTTAC CAAAAGCAAA TGGCAAGGCA ATTTTAAATC TTGATTTCCT CTTAACATAT GCACCACAGC AGCAAGACAT ATCGAATACC AGAGCAACTC AAGAGGAATT CAACAGATGG TACAACGCCA TTAAGAAAGA ATACGAAGTT GAAGACTCAC AAATGGGAGT TCTTATGGAT GGACTTATGG TTTGGTGCAT AGAAAACGGA ACTTCGCCGA ACATAAACGG CGTTTGGACG ATGATGGATG GTGAGACACA AGTCACCTAC CCATTAAAGC CTGTGGTTGA AAACGCATCA CCAACACTCA GGCAAATCAT GCACCATTTT AGTGATGCGG CTGAAGCATA CATAGAGTAT CGAAATTCTA AGGAAAGATA CATGCCACGA TATGGACTTC AGCGAAATCT GACCGACTTC AACTTAGCTC GTTATGCATT TGATTTTTAT GAAGTTACTT CGAAGACAAC AGCACGAGCA AAGGAGGCCC ATATGCAGAT GAAAGCAGCA GCAGTGCGTG GATCAAGTTC ACGTATGTTC GGCTTGGATG GGAATGTCGG TGAGACCCAG GAGAATACAG AAAGACACAC GGCTGGCGAC GTTAGTCGCA ACATGCATAG CCTTTTGGGC GTGCAGCAAG GTCATTAGTC TGATGGAAAC CCTGATTGCA GTATCTAAGT ATCTTACATT TTACTATTTT AAGTGAGGTT TTACCTCGTT AGTATTGTGA GTTTACTTAT CACATATTTA CTATTCTGCA GGGTGTGTGA GGCTTTGCCT CTTACCTTAT AGTCGTATGT GCACTAGCTT CGAACCACGA AACGGACGGA CTCTGTTGTG TGGCTCTGCT ACGATGGGTA TTGCGAGTTC CGTGGCGAGA GACC 
Length9544
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1 Virus3795
7.14143 Ahg475616 ribosomal protein L16
8.48528 Virus1140
9.69536 Ahg899731
11.225 Virus3714
11.4891 Virus0399
12.49 Ahg339748 HVA22-like protein G
13.4164 Virus3489
13.6382 Virus0931
14.7648 Ahg912015 Concanavalin A-like lectin protein kinase family protein
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression