Detail



ID : Virus3439

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionMarine_RNA_virus_JP-A|enviroment|ssRNA
Sequence
AGATAAAAGA CTCCACATGG GTTTCACCCA TGTGGAGATC ATCAAGCTTT TATCAGTAGT AACATTCAAT TACTCGAGTC CTCTTGGACT CTTTCTAGGA ATGATAACAA AACTCAATTC AGTCGTCGAT GGCTCATGCG GGTCTATTCC CGTCTGAGTT ATACAATTGT CTTGAGTTTA TTATGTTACA TCACTATTAA GAGTCTTATT AGTGACTCGT TTAGTTTAAC TGTTAATACT GGTAAGTTTG TGATCTGACC CAGTTTTTCA TCTATTCAGT GTTTTCTGCT AACCATGCAG ATTTATAGTC GCACTGTCTA TGCTTAAAGC AAGACTAATT TACTGGGTGT AAATTGAATA TAATGAGTAC TAGGCTTTGT ACTTTGTTGT ATTTGTCCAT TAATTTATTA CACTCCCTGG ACCGGGAGTG TTTTACCTTT CTCTTTATTG AGATAAAACT TTATAACCGT GCTGATTACT GATCACGTGG AAGCACATAA ATATGTCCAC ATGAACTAAG CTATAATTAA TAGCCATAAA GTCCTTGCTT CGGAAAAAAG AAGTAAGGCA ATATCCGAAG GTGTCGGTGT TCCAAAATAG GCCGGATTAT AGACCTATCG AATCACCCTA AAATGTACTC TTCTTCGGAA AGTACAGGAG GGGGAAGTAA TTTTCCTCGT TCCAGTGACC AATGTCACGA AATGAAGACC CCTAACTTTG TTAGCGGCAA CGCTTCGGCC AGCGTAAAAG CCATTCCTGT TGTACATTCA AACAATAGTT TGTCTCAATT CAACACTGTT CCCGTTCAGA CCCAGGATAA CGCGGAGGCT CACCAAGCCA AACAGGTTTA CGATAAACTG GCGCAAGCCT CTACTTATTT TCCTTCTAAG CACGATAATT ACAATCAATA TGCTAAAAAT CGAGCTTCGT CCAAGAAGGA AGCTAAGAAG AACGTTCAAC GCTTTCAAGG AAAAACTAAT CCTAAGAAGC AAAATGGATC GAAAAAGAAC CAAAAATCCA AATATGTAAA ACAATCTCTT TTGGAAACCT TATATCCTTC AGGAATTATT GATCAGGCTA AAAACATGGT GCTTGATACC CATATTAATG CAAATATGTC TGACCTCACC AATGTTCTTG AAAATTTAGG TCTTTTGTCT TATTCTATCC CCAAATGCAA CTCTAAGCTT GAAGTTGCAG TCCAACTCGC TTTGGCCCTT AAAACTATGT ATAAGGGTTC TGTTATTGAA GCGTTATTGG CACATGCTCC CACAGTGGAG TATTTGAAAC AAGCTTTTGG CTACAACATC TTCCATCCCC AATCTGGAGA TGTTGATAGT CAAGACTGGT TGTCCTACCT TCCTAAACTA AGGGAAAATT GGGATACCAT TCGTTGTGCT CCAATTTTTG AAAAAGTATC TAACCTTATC TCTGTTGCTG CTACAATTGG TTTATGTAGT GTAACCAATT TAGCATGGAG TGTTGAAGGT ATTGAACTGT TTCGTGTTGG AAGTCTTCGG AAGCATGCGA GTGCTTTTGA CTTTTTTGGA GCAATGTTGG ACACTGTTAT CTCCTTCATT GAAGGTGGTT ATGAGTGTTT TCGCCAACGA TCTTTAAAGC CACTCCTTTT TACCACAGAT GCTGGTGCCG AATTTGATGA TCTGTACTTT GCGTGTTTGG AATTACATCA ACACGCTTTG ATTTTCAATT TGGCAGCAAA TCCAGTCATG TACAAGGGTG AGAAGCAAAT CATTACAGAT CTCCAATATA CAGCTATGTT AGATCAAGCT GTGGAGATGG CTGAGTCTGC ATATAAATCT GCCAAGGGAA CTTGGCAAGC TTCCGTTTTG GAGAAGCGGT TGGTTAATAT GAGAACACAA CGAGCTGAGT ATAGTGCTCG GCGCATTGAT GGATCGCTTA GATATGCCCC CCTTACTTTA TATGTGTGGG GAGAATCTGG AGTTGGCAAA TCTACGGTCG CCCAACTATT GATGAGTGAC TGCCTTGTTG CCTCAGGAGC TGATCCTGAT GCCTGTAATA CGGCAGTTCT CAAGGAATCT GACAAATTTG ATTCCACTTT GAAGGGTGAC ACCCAAGGCA TTTATTTGGA TGACATGGGA AATACCAAGA TTGAACTATT GGATCGTTCA CCTTGTGAGA GGATGATTGA TATCAATAAT AATATGGTTA CCTATGCCAA CAAGGCTGAT TTGCATGAAA AAGGGAAGAT TGAGATTCGT CCTCATATTT TTATTGTTAC TAGTAATGCT CCACTTGCAG ATCATGCTCG CCGTTGCTCA ATTAAGCCCA TGTCCATTGT TCGACGCGGT GATATTCATA TTTTGGTTAA GGTTAAGCCA GAATTCGCTA TGTCGGATGG ACGTCTTGAT TCCAAGAAAG CTAATGCAGC TTTTCCGGAC GAGACTTTTG AGACTGATGT TTGGGACTTG ACAGTTTATG TACCAGATGG TAAGAACAAG CAGTTGATGC TTGGTCCTAT AGATGGTAGC ATGAAGGATA CTCACATGAA TATTCATGAT CTTCTTGAAT ATGCATGTGA TATGTGTGAA GATCATTTTG AAAATCAAAG GAAACTTATT GCTAAGGCTG AAAGTCTCGT TGTTTCTCGA GAATATTGCT CGTCATGCAA ACGTCCTGCT CGCAGGTGTA AATGCCCAAC TGAACCGCAA TCTGAGGTTC CTCCAGCAGA GAGTGAAGAT GAAACTACTG TTGAGGAAAT TGATGAATCA ATTGAGACCT GTGACCATTC AGATCTCTCG TGGGATTTGT ATTGGGATTT GTATGATCGA GAGAATCTTA ATGAGGCTTT TGAATTGCAA TCACTACGAG AGTTGTCATT TGATTCAATT AAGGCCCAAT TTGAACGTAT GCCACGTTTC TCCAGTGCTA TTGCAGTGCG GGTTCCTACC TGCATTGTAA ATAATATTTG GATTCAGCGT GCGTATATGT GCGTACATGC TTCAGAATTC ATTGCCTTGG AGAGAAATAC TCGACGCAGT ATGATGTCAT TCGTTTTTAT GATGTTCTTG TGCGGTTTCC TTTCGGGTAC TTTTTCTGCT GGATTGGTGT TGTTCACACT CTTTGTCAGT ATGCTTGTTT ATTATACAGC ATTGGCAAAG TGGAAGAATG ATATGTGTGA ACAATTGGCA TCTCGAAGGG ACATTACTGA TGATTTATTT GCTTCCTTGC GTCAAAGTAA GGCAGTACAG TTCTTTTCCT TTTGTGTTGT TGCCAAGGTT ATTTACAAAA TTGTATCCTC CATGAAGATT ATGCATGAGC ATCAAACTGC TTTAGCACCG GAAACAGTTG TTGAGGTAGA AAAGCGAAAT GCTGAGGTTA ATCCCTGGGC AGTTCCTGTC GTTTCAGAAT TGCATATTAA CCATAGGAAT GATACAATGA CCATTGATCA AGTCACTGCC AAAATTTCCA AGAATTTATT TCATGTGAAG TTGGTAGAAA ATGGATTTCA GCAGTCCTGT GATGTTTTGG CTCTTGGAGG AATTAGCTAT CTCTTTCCAT TGCACATTTT TGAAAACCGC AAGGATATGA AAGGTCTATT TACGCGATAT GACCCTTCTA AAATTGGCGG AACCTTTAAA GGTGTGGTTG GTGTCACTAA CATGGTGCCA ATTCCTGGAA AGGATTTATG TATTGTAAAT ATCCCTTCTG GAGGTGTGCG TGCCGACATT ACTCATTTAT TTCCTGATCT ATTGACTGTA TCGGGAAATG CCCGTATGTT GTATCGTCGG GAAGATGGCT CTATTATGAA TGATGTTGTT CGTGCTAATT ATATCAAGAA TTCAGAAGCT GGAGGCGCAG GTTACCATTA TCATTGTGCC TATAACACTT TTACTGGATT GTGTGGAGCT GTTTTGGTTG GGTGTTTTGC CAAATGTACC ATTGCTGGCA TTCACCTGAG AGGTATTTCT GGTACTTCCA GTGGCAAGGC TCTCACTGTT ACTAGACAGG AAATTTTTGA TGCTATTGCC AAGACTGAAG ATTGTGTTAG TAGTTTCCCT ACTCATGTTA ATGGCACTTT CCCCACTACT CGATATGAGA AGCAGGTTAT TACTTCGACA GATATTCATG TCAACTCTCC CATTAATTAT TTGCCTGAGG GCAGTGATAT TGAATACTTT GGTCAAACTG GCCAACGTGC GTCTCATACC AAGAGTGACG TTGTTATTAC TCCTATTTCT GATGCTGTCA CGGAAGTGAC TGGTATCGAA AGAAAGCATG GACCCCCTCA ATTTAATAAT AAATTGATGT GGCAGGCTTC CCTGGCTCAT TCTTCTAATG CTAGTGCGGG TGTGGAACCC TCATTGTTGG ATAAGGCAGT AATTGACTAC CAGGCACATA TTCTCGAAGT TTTCCAATCG AAGGAATTTG GTGACATGGC CCGTGCAGAG TTGAAACCTC TCACGGATAT GGAAGCTTTG TGTGGAAGGG ATGGTGCTCG TTTCATCGAT GCCATGCCTC GCTCCACTTC CAAAGGATTT CCACTTTCAG GGCCGAAGAG TGATATGATT ACACTCTTGA ATCCTGAGGA TTATCCCGAG TTTGCTTGTC CTGCTGAATG TGATAAGGCC ATCATTGATG AAATGAATAA GATGATTACC GCTTTCCTTG GAGGCAAGAG GTGTTATACT ATTTTCAAGG CATGTGTCAA GGATGAAGCT ACTAAGATTG GTAAGGAGAA AGTAAGAGTC TTTGAGGCGG CAGACTGGGC CTTTCAATTG ATTGTGAGGA AGTATTTTCT GCCTATTGCC AGGATGTTGT CTTTGTTTCC ACTTACTTCT GAGTGTGCCG TTGGAGTTAA TGCTCAAGGC CCCGAGTGGG ATCAGTTGGC TCGACACATG AAGAAATTTG GAGCTGATAG AATTTTTGCA GGTGATTACA GCAAATACGA CTTGCGCATG CCTGCACAAT TAATTTTAGC AGCTTTCAAA TGCTTGATCG ACATTGCAAA GACATGTGGG CAGTACTCTG TGGATGATAT TAAAATCATG CAGGGCGTTG CCACAGAAAT TGCTTATTCG TGTGTTTCGT ACAATGGAGA TTTGATTATT CATTGTGGCT CCAATCCCTC TGGCCAGAAT TTGACGGTTT ATATTAACTG TATTGTCAAT TCACTCCTGT TGCGATGTGC ATACTATCAT ATGTACCCCG CTGCAGAGGG CAATCCAGAA CCATTCCGTC ACAATTGTGC TGTTATGACT TATGGAGATG ATGTCAAAGG CTCAGTTCGA CAGGAATGTG ATTGGTACAA TCACATCACT TATGCTCAGT TCTTGGCTGA AAGGGATATG GTTTTTACCA TGCCCGATAA GGAGTCGACC CCCACTCCAT ACATGAATGA CTTGGATGCT GATTTTTTGA AACGTCATAA TTTATACAAT CCTGAAACTG GATTGATTCA TGGTGTTTTG GATCAAAATT CAATTTTCAA GTCACTACAC TCCGTTTTGA AGTCCAAGGC CATTTCGGCT GAGGATCAGA GTGCCCAAAA TATTGATGGA GCACTTCGTG AATGGTGGCA GTATGGTCGT GAGATGTACG AATTGCGTCG TGATCAGATG AGGCAAGTGG CCATTAAGAC TGGCATTGCT CATTTGTGTA CTGAGTTGGA GACTTCATAT GATATGAGGA TGCAGGATTT CAAGGAGAAG TATGAATTGT AAGCTTCTCC AATTGTCCTG GGATGACGCA AAACTCACTC CAACCTCCGG AACCATTCGT AGGCAATAAG TTTAAAATGG TCTTGTTGTA TTGGATACCA TGTATATTAG ATTTTTGATG TTATTTTACT GTATATAGGC TTGCAACATG TTGGCATTCC CCCCGTGGAA TACCCGTGTT TACGGGAGGC CTCGCCAGCC AATTAGATTT CATGCAGGAC ATGCATTAAG CGATGCATGT ACCCTAAGTT CATATAAATT GCTTACTACT AATTATAATA ATAATTCCGA AGGGGACACC GGATTTAGTG TCTCCAAAGT CGACCGTGAG TCGGCAGCCC AAAACGTCCA TTTTGTGGAC GGTGACACGC CTTGGTCGTA TGATATTAAG GCGAATGCTG ATGAAACCAC CAAGCTCGCT GCGTTCACTG ATGCAGAACT TGGCGATTTC CTCAGCCGAC CTATCAAAAT CAAAGAATAC CAGTGGACGC CTGGAGTTGC GTTGTCAGCT CCGCGTTTCA ATCCGTGGAG GGAATTCTTT AACAATTCTG ATGTTCTTGA TAAAATTAAT CGTTATCGTA ATTTGCGCTG TAATTTGCGC ATGAAAGTCT TAGTGAATGG AAATAGTTTT TACTATGGTC GTGCACTGTT GACTTATAAT CCTTACATTC AGAACGATGA AGTTACTGTC AATCGAACAT TTATTGAAGA AGATCTCATT CAGGCTTCGC AAAAACCACA TCTTTTATTG GATCCTACCA CTTCTCAAGG TGGAGAGATG CTCTTACCGT TTATTTGGCC GGAGAACTAT CTTAACATTA CTGTCGCAGG TTGGAATGCC AATATGGGAG AAGTTGATAT TCATGATTTT GATGTTCTCC AGCATGCAAA TGGTGGTACA GATCCAATCT CTATCACTAT CTTTTGCTGG GCCGAGAATC TTACTTTGGC TATTCCTACA ACGGCACAAG TGAGCAATGA TGTGATCGCG GGTTTCTTAC CCCAGAGTGA GGTTGCTCCT CCCCCAAGAA AGATGGCGGA TCCAGGACAT TTGGATTCTA TTCCTGAGCA TAATCTGCCT TCTCCATTAG TTAGGAGATA TCCAGTGGAT GTTCATGGAC ATCTTAAGCC TCCTATGTAT ACTAATCTTT CTTCAACTAG TCCATATGAG CCACAAGGTT TTGTGGATGA TTCTGAACTT GATGAATTTG GTTTTCCTAA GTCATATGAT CAGCAAGCTG GAAAGGGAAA AAAGAAGGCC GTTATGAAGG CAAATAACAC GACATCTAGT GATGAATTTA CACAAGATGG TTTGATTAGT AAGCCGGCAT CTGCAATTGC GAAAGTTGCT GACGCTCTTT CTATGATTCC TGTGTTAGCC CCATATGCCA AGGCTACTTC TATGGTATCT ACTAGAGTTG GGGATATTGC ACGTATTTTT GGATATTCCA GACCTCAAGT ACTAGAGGAC ACCAGATCAT ATGTTCCACG TTACCTTGGA AATCTCTCAA ATGCGGATGC TCCAGAACCT TTGGTCAAGC TATCACTTGA TTCAAAGAAT GAGCTGTCTA TCGATACGCG TTTAATGGGA CTAGGTGGTG AAGATGAACT TACTGTCAAT TCAATTTGTC AGAGATGGTC TTATTTTAGG CAATTTGATT GGCCCGAGAC TGCCGTCACT GATACTATGT TGACTTCTAT GATTGTTTCT CCCATTTATG GTAGATCAGT TATAGCTCCA CCTATCAATG AAATTCACAG TACTGCTTTG GCATTTGGTG CTTCACCATT TGATGCCTGG CAGGGTTCTA TTAAGTTTAG GTTTAATGTG GTGTGTTCTG AATACCATCG TGGCCGTATC AGGATCGTCT ATAATCCTGC TACTAGTCCA TTTGGTGCTA TTCCTTTCAA TCAAACCTAC TCGACTATTG TTGATATCTC TGAAAATAGG GATTTCGAAT ATGAGGTCAA GTGGGCTGAT GTGAGGGCAT GGGCTACCAA TGTTGGTATC TCTAGAATTC CAAGCACTAT CATCTCCGAT GATGTCATTC CAGTACTTTG TGGTGGTGCT GCAGATAATG GATCACTTTC TGTTTATGTT GTGAACGAGT TAGCAACTCC TTCAACTACA GCAGCTGATG TGAAGATTCA AGTCTGGGTC GCTGCTGGAG ACGATTTTGC TCTAGCTGTT CCCACGACTA AAAATCTTTC TACATTATCT GTTTTCAAGC AACAATCAGA AGTTGCTCCT TATGCTCCTC AATCAGAGGT AGCACCGGAC GCTTCATTGG CTAATACTGA GGATAAGTCT AATTCCCCAA CATGTACTGA AGAAGTTGCA TCCTTTGCTC CTGGTGGAAA CATTCCTGAG GATAATCAGT ATCTTGTTTA CCAGGGAGAG AGGATTGTAT CTTTTCGAGA AATGTTGAGG CGTTATCATT ACTTTAACTC GTATTGGCCT GCTGAGACAG GTACTTCCAC ACAAATGCGT ATTGTCAGAT TTAATCTCCA TGATTTTCCA TACTATCGCG GTTGGGAACC TGGAGGTGAA GATGCAGGCT TTAATGCAAG TGCTTCCTCT TCTGATTACA ATTTTTGTAC TGAAACCCTC CTAAATTACT TAACCCCTGC TTTTGCATGC AGACGTGGTG GATTGCGCCA TAAGTATTCT TTGGCACAGC TTGGGTCTGC TGTACGGGCA GTTAAGATGT CTGTATCTAG GAACAATTTG AACGGTTCTG TCAACTTATC ATCAGCGCAT CGGATTGATG CTGCTTTAGA AGGCGATAGA CGCAGGCGCA TTCAAGAAAC TGAGCGATCT AGTTTGGGAG GGTCCCACGC TACTATGGCA AATGTCAATC CAGTTCTCGA GTTTGAAACT CCATACTATA CAGGAGGACA GCGCTTTGAG TCTGCTCGGC GTATTGGTAG ATATTCTACA TTTTTGCCAA GTGCTCATGA TGTATCAGTT GATATTCCTC AGAATCTTGC TGGATCAGAT TATCGTATCG ACAGATATAT CTCCGTTGCT GAAGATTTTC AATTGGGTAT GTTTACGGGT GCACCTATCA TGTACTCGTA CACCAACCCA ATTGCAGCAT AGAAAATGAA TTTTTGGGTC AGATTCATAA ACTATTACAT AATTTATATA TGTGTTAGAG TCGCGGTGGA CTCTATGTAC AAATAAACAC CAGAACCTTC TTCTATGAAG CAAACTAGAC GTAAGAAATC GTAAACAATC GATTAGAATA CCGTTCGGTG GCCGAACGGG GGCATGGACA TGCCTTGTCC ATACCTAGGC GAGATGCTTA GCATCTTACA CTGTATCTAT TTTGTAGATC CAGGGTTTTA TATACAAACC CTTGTAAGAT GTTCGCATCT TGCAAGGGTT TGGATTTTTA CCTGGGTCAC AAGTTCTTAT AGTGTATGCC TGAAGTAGTA TATCACTTTT CAACCGTTTC TTTGCGGTTA ACCAATCCGC GCGTTGGTTG AAAAGTGTTG GGCCACTTAC GCAAAAAAAA AAAAAAAAAA AAAAAA 
Length9236
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg891917
1.41421 Virus0379
3 Virus0715
3.4641 Ahg911166 Defensin-like (DEFL) family protein
3.87298 Virus0383
4.89898 Ahg931131
5.19615 Ahg889075 nodulin MtN21 /EamA-like transporter family protein
6.9282 Ahg943152
7.4162 Ahg950984
8.3666 Virus1598
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression