Detail



ID : Virus3732

     Link: ATTEDⅡ / TAIR        MR: MR LIST


Annotation
DescriptionShallot_yellow_stripe_virus|plants|ssRNA
Sequence
AAATTATCAA AACCAAACAC AACATAATGA AGAACAGCCA AGCAACTTAC GTCCTAGCAG GATTCTCAAC CAACTCACAA AAGCAATACG CCAAAGCCAC CGGAAAGCGG AGGATAAGTA GGAGGGAGAG ATTAGTCTGT CATTGCGATG GGGATGAGGA AGGTCACTTT CACTGCACTC ATTGCGGAAG GGAATGCGCT TCATTAACTA TGCTGAAACA AAAGAACCAT ACGTGTTATG ATTCTTTTGA GGATGCACAT ATCAGTGTCA AAGTGTCTGA CACTCAAATA AAAGACCTGA GCACCATGGG GCGCGACAGA AATGTAGGTT CAAATGCTCA AAAAGACACA CGCAAAGCAA TTAGCCCAGC AAAGAAAGTT GTTTTTAAAC AATTTGACGA TGTTGAGCCT ATTGCTACAG GATGGGACAT CAATAACGAT CTGCAAAAGG AGCAGATTAC TGAGGATGCA ACACACACTG TAGTTGGCAA TTTGCCAAAA GCTACACCTA AACAGGATAA TGTGGATGGA GAAACCGACG GCATTATTAA ACAAATTGTT TTCGGGCGAT TTGGTGATAA TGATAATAAG ACACCTGAAC ACATAGTGAC TGCAAATCAT AAATTTGGAC ACAACCTCGA TGGAACACAG CACATTACAT TCGGAACACT TCCAAGTGTT GAGGTGCTAA CTACTCCTAA CATAAGTTAT AAGACTAGTG ACCAGTGCAA AGAGACTGAA GTGATAGGCA ATAGTGTCAC TAGTGTTGAA GGAGCAGTTG AACTTAATAA TACATTACCA TTCGAATCTT GTAAGAAAGT CGCTCGTCGA CCGATCGCAC TCAAACCATT GACAATCCTC TGCACAGAAA TATTATCTGG ACAACACGTC TCACTATGTG AGGTCGAGGA CAACATTAAA GTGGAATTGG AGGTTAACAA CAAACTTAAT GAACAAGTTG TGAAAACGAC AAGAAAGCAG CCTCAAATTC GTTATCAGGT GCAAGCTAAG GATATGCAGA GCGATGGGAT AATAAATAAT ATAATAAAGG TCGCATATGA ACGCAAACTC AAAATTGAAG TGATTGAGCG AAATAAGCAC ACATTCACGC CATATAAAGT GCAAGATCAT TACTTTTATA AAATTGGAAC AGAACATGAG AAGGGCCGTC TTTCGAGAAA GGACGTCAAG TGTACCCAAA TGGTTATGAA AGTTATGAAG CAGCTTTTGG ACATGACACC AAGTGTAGAA ATCGATAGTA CACAGATACA AAAGGGTTCT AGTGGTCTAA TTATTCGACC CAACCAGATA ATCAATTGTA AGAAAATGAA TGCGAGGTCA GATGTCATGG TTATTCGTGG TCGCAAGAAT GGATCATTGG TGGATAGTTT ATTAACACTC AAACATGATG ACCTAAAAGA CGTAGATCAT TACTCGGATT CAGAGATTGC GCTAAAACTT TTCGGTGGTT TCAATAAAAC GTTCATTGCT ATTAGGGATA AACCACAACA TGTATGCGAA CGAGACATTG AGCTTGAACT ATGCGGAGAG ATGTGTGGAA CGATAACACA GATGTTAGCA CCTATGTTTA AAATAACGTG CTCGCAGTGT GCAACCTTAC TAGCAAGTCG AAGTAAAGAG CAACAATATA TGGACATGAG TCGACAGAAA GTACTCGAAC AATATGAACG GCTTATTGCA ACTGGAAAGT TTCCACACAT TACTCGAGCG ATTGAGAACT TGAATCCAAT AAGTGAAGTA AGTGAGAGAT CTCTTAGCCT TTACACGCAG ATTGACTCAC TTAGTATGAA CGGGCAAACA TCACAGAGTA GGCAAATAAA TGAAATTGCC AAAGTGATTG TCAAAGGACC TCTTGTGTGT AACGATGAGA CTGAAGCAGC TTTGAAACAA TTACTTGAAT TGACTAATTG GTACAGGAAA CGATTAGAAG CACAAATGTC TGGCGGATTG GAGTCATTTA GGAATAAGAT ATCATCAAAA ACACATATAA ACTTGGCTTT GATGTGTGAC AATCAGTTAG ACGTGAATGG GATGTTTCAA TGGGGTGAAA GAGGTTACCA TGCTAAAGGG TTATTTGCAA ATTATTTCAC TAAGGTGACG GACGGTTCAC AGTACGAAGC TTTGGCCATT CGCAAACACA TACGTGGCAA CAGAGAGCTA GCGATCAAGA ATTTAATTGT GTCGAAAGAC ATAGCAAAAA TGCAGCAATC GTTTGTAGGA AACCCTATAG TGGCATATCC TTTAGGAAAG GCATGCATAT CAAAACTCAA CAACAACTAT GTTTATCCAT GTTGTTGTGT AACAATGGAT GATGGGAAAC CGCTATGTTC CGAATTACGA TTCCCAACGA AGAATCATCT AATAATAGGT AATAGTGGGG ATGATAAAAA TGTACAGCTA CCACCAAGCT CTGATGGGCA TATGTATATA GTGAAAGATG GTTTTTGTTA TGTCCTCATA TTCCTCGCGA TGTTAATAAA CGTTTCTGAG GGTGATGCAA AGGGTTTTAC GAAGAAAGTC CGCGATGATA TCATTCCACA GTTAAAACAG TGGCCGACCA TGCGAGATTT GGCAGTTATG TGTAGATATT TGTGTGCTTT TTATCCAGCA GTAATTACAG CTGAGATTCC AAAAATTTTA GTTGATCATG AGCACAAGAC GTTTCACGTT ATGGATTCAT TTGGTTCGAA AACAACAGGA TATCACATAT TGAAGGCTAA CACAGTACAA CAGCTATGTC GATTTGGCGA TGTCGATTTG GAGAGTGAAA TGAACATGTA TAATGTTGGA GGTAGGCAAG CACCAATTCA TGTAACATGC ACCTACGGTG ACCAGAAATT CGAAATGCGA AGTAACATTG AATTGTCGGA AGATTTTGAA GGCTGTGATT CATACAACTA TGAATTGTGG GATTTTAAAC ACGACATTGC ACGAGGAACG CAAATTAGCG AAGCAGGATG CTGCAGTGAA ACGATAATTA GTGACCACAG CGAGTGCTGG TACAACATAA ACGATGAACT CAGTAACGGG TCACTACATA CTGACGAAAT CAGTTCTGAT GAGACGGACT CAGAAAATCC AGAATCTGAT GACAACCCTA TAGAAGATAG TGTTAAAGCA AGATCACGAC CGGCATCCCT TCACACTATT GATAGCGAAA GCGATGATTT AAGTGGTAGT GCATATGAAT CCGACGATGG CAGTGTTCAA CACAGTGAGA GTAGTGCTTC GCCTAGCGAA AAGGTAGTTG CAGACTTAAA TGCACGCTTG GCACGAGCAA AAATGAACAT AGATAGATCA CCTGAAAGTA AAGACATAAC ATTCTTCAGG AGTTTAGTGA AAGCAGTATT TTCCAAGCGC CATTTTGAAA AGATTTTGAG GGAGGATCCA TACATACTGT TGTTTTCGAT GCTAACACCA ACTGTCATTA CGCGTATGCT ACACGACGAT CTGTATGTGA AGGCGAGCCA ACTTTTAATA ATGCATGATG ACGATTTAGC AAGAATTGCA TCAACTTTGC AGATAATGGC TGAAAGAGTT AGCCGCCACA AGGTTTTTGT AGTACAAATG AGAATTATTT CTGAAGCTGC AAGAGACATA CTTGGACTTT CTGAAGGTTT CCACAACACT GATAGTTCTC AAACAGCAAG GCATCTTTTA GAGATGCTTA ATGAGCAGGA CTTAGCTGAC TTCGATTTGT TAGCTCAAGG GTATGTCGCA AGCACACAAA AATTGTATGA GATGAAGAAA AAATGTTTCG ACACAATATA TCACGATTAT TTGCGAGGCT TAAGTTTGTG TCAGAGATTG GGATGCGAGT GGCGCAGTTT AAAATACAAC TATCGTATGC GCAACTTAGA TCAAAGCGAA GAACGATTGA CGTGCATAAC GATTGCAAAA GATTGCTTAG TGCAGTGTTC AAGTGCAACT CAGAGTTATG TGAGACAGCA TGCAGCAAAC TTATATTTGG GAGCAACAAA GATTGTTAGA TCAGTGGCTA GAAGGGGATG CTATGTAGCA GTTCGTGCAA TCTCGTCTTT ATACAGAGAC ATCTTAGTTT ATATCAACAT TTTCGCAGTT ATATCAATAT TACTTGCAAT GTGGAATACA GTAGTCGGTA TACGAACAAA TTACAAGCGC CTCCAACTTG AAGAGCTCAA GATCCGACAT AGCAAACAGA ACAATCAAGT GGAGAAATTA TATGCACAAT ATATAAAGGA GCACAAGGAC AAACCGACAA AAGAAGAGTT TCAGGAGTAC ATCAGTGATC ACAGTGACTC GTTGCTTGAA TTCTTTATTC GTAATTACAT TGGCGTTGAA TACCAAGCAA AATCACAGTC TGAAGTTACG TTAGAAAAGA TCGTCGCTTA TGTAGCACTA TTTGCCATGT TATTCAACTC GGAAAAGAGT GACGGAGTCT TTAAAATACT ATCGAAACTG AAAACCATAT TTTCAACAAC GGATGTTCAT TACCAAGCAC TGGACTCTCC GGATGACGTT GAGGAGTTTT TGAACACTAC AGTCGATTTC GAAGTAATAG TGCCAAACGA ACCCGATATT AATAGTTTCG ATATGACATT CGAAGAGTAT TGGAAGAAAC AATTAGCGAC TAATAGATTT TGTGCAAACT ATAAGACGAA TGGTGTGTTA TATGAATTCA CTCGGAAGAC AGCCGAAGAT GTAGCAAGCA AAATACAGCA GGAAACTCAT ACTGAGTTCT TAGTTAGTGG CGCTGTGGGC TCGGGGAAGT CGACTGGTCT TCCATTTTAT TTGAGCCAGA AAGGAAAGGT TTTAATAGTA GAACCTACTC GCCCATTAAC CGAAAATTTG TTCAATAGTC TTAGTGCTGA ACCTTTCAAC CAAAGTGTAT CCATGTGCAT GAGAGGAAAT ACTGTATACG GATCAGGCAA TATCACAATT ATGACCACAG GTTATGCACT GCACTATTTG GCTAATAATA GAGAGCAAAT AAAAAGTTAC GACTACGTGC TAGTGGATGA GTGCCACGTT ATGGATGCTA ATGCGATTGC GTTCTATGCG TTACTAAAGG ATACCAATTT TAAAGGAAAA ATCATAAAAG CTTCAGCCAC AATTCCAGGA CATGAAAATC GCTTTGAGTT CAAAACGCAA TTTGAAACTA GCATCAACTT CGAGGGTCAA ATGACATTTG AGCGATTTGT TAAAGAGCAG GGTAGTTGTT CAAACGCTTG TGTAGTTTCT AGAGGTAACA ACATACTTGT GTATGTCGCT AGCTATAGTG AAGTAGACAC ACTTTCGAAA CTGCTGTTGG AAAAGGGTTA CAAGGTTACA AAAGTCGATG GACGAACAAT GAAAGTTGGT GGCACACAGA TTGAAACAAC AGGTACTCCC GATAAGAAGC ACTTTATAGT GGCAACTAAC ATTATAGAAA ACGGTGTCAC GCTTGACATA GAGGTGGTTG TAGATTTTGG ACGAAAGGTC GTGGCAGTTT TGGATGATGA ATCACGAATG ATGCGGTATA CGAAGCAGGA GATATCACAC GGTGAGCGTA TACAGAGACT TGGGCGTGTT GGTCGAAACA AACCCGGGCA CATACTGCGA ATCGGATCAA CACAAAAAGG TATAGTAGAA ACGCCAATAT GCGTAGCGAC AGAAGCAGCA TACTTATGCT TTGTTTATGG ATTGCCAATA ATGCCTAACA ATGTGAGCGT TAGTTCAATC AGCAAATGTA CTACAAGACA AGCACGAACA ATGGCAGCGT TTGAATTATC ACCTTTCTAT ATGAAAGATT TAGTTCGATT TGATGGTTCA ATGCATCCTG AAATCCACAA GATTCTTAAG AAATATATTC TGCGCGATAC GGAGATCAAA ATAACTGAGA TGGCTTGTCC AACCGGTGTA ACGCGAACGT GGAATTCAGT AGGCGAATAC AATAAAATGG GTGGTCATAT ATTGTGTGAT GAAAACATTC GTTTACCATT TTTCGTCAAT GGTATCCCTG AAAAAGTTCA TGAAGAAATT TGGGATGTGG TTAAGCGGCA TCAAGGCAAG TTTAAATTAG CACCTTTGAA AACAGCGAGT GTCAACAAGA TCGCATACAC ATTGTCAACC GACAAGGACT CACTTGTGCG GACAGTTGGT ATGATTGAAG AAATGATCAA AGAAGAACGA TATAAGCATG CTCAGTTTCA AGCAATAAAG AACACTCCAG TTGGAGTTGG GAATTTCAAC TTGAATTACT TTTCAAATTT ACTCAAGACC CGATACATGA TTGATCACAG TGAGCAAAAT ATTGAAATAC TACAGCGCAC GCGTAGTCAA TTATTGGAAG TTCATGCTTT ATATAATAGC GAGATGTCAA CGACAGTATT ACGTTCATAC CCTCTCGTTT CTGCAGTGGA ATATCAAACA AAGGAACAAC TCTCAAAGGG TTTGTGTCTA CAAGGAAAAT ATGAGATGTC GAAGATCAGC AAGGACGTCA TAGTGTGTGG TTTAACCTTA GCAGGAGGTC TATTTATGAT ATACAAGTCA TTCTGTGATG GTGTGGAATC TAAAGTGCAT TATCAGGCAA AGTCTAGAAG ACGACTTCGG TTTCGGGACG CAGCAGATCG CAAACAGCGT TGTTCACTTG AGGGTGATGA TAGCACAATA GAGCAATACT TTGGATCTGC TTACGTAAAG AAAGGAAAGC AAAAAGGAAC AGTTCGTGGG ATGGGTATCA AAAATCATAG ATTTTACAAC ATGTACGGAT TTGATCCGAC GGAGTATTCA ATTGTTCGAT TCGTCGATCC TTTGACGGGT AATACATATG ATGATGCAGC TACTGCCACA ACGTACAACG GTGTCTCTGC GCTTTTACAG ATGCGACGAG ACATGGTTAA CGACGACGCA ATGGAAATGC AAGCGCTGCA CTTAAATAAA GCAAAAATTC TTGAAGCGTA TTATATCAAA GCAGGAGCAG ATAAAGCATT AAGGGCTGAT TTAGAAAGGG ATAGAGTTTT AAAAGTCACA CTAACACCAC ATGATCCACT GATGGTTTGC CACAATTTCG AAACTATTGC AGGCTATCCG GATAGAGAGG GCGAGTTTAG ACGCACAGGG CCAGTAGAAA CTGTCTCAAA AGATGAAGTA CCAAAGGCAC AATCATATGA ACCAGTTTAT GAAGTCGCAT ATGAGGCAAA ATCACTTTGT TCAGGACCAA GAAACTACAC AGCAATAGCT GGCATTATAT GTCGACTTAA GTTGGATAGT GATGGACATA CGAGAGAGAT TTATGGAATT GGATATGGCC CATACGTTAT AACGAATCAG CATTTGTTTA CACGGAACAA CGGAACACTG AAGATTAAGT CTCAGCACGG AAATTTTCTT ATTAAGAACA CAGCACAATT GCAACTGTAC CCTATAGATA AGATGGATCT CGTCATTATA AAGTTACCTA AAGATCATCC ACCATTTAGT CAGAAGGCAA ACTTTCGAAC ACCGAAGGAA CATGAAAAAG TTAGCATGGT TTGTGTTGAG TTTCTTCCAA GTAGCAATAC ACCATCAGTT TCTGAACCGT CGTTCACATT TCCAGAGAGA AATTCTCATT TTTGGAAGCA TTGGATTTCA ACGAAGGAAG GTCATTGTGG GCTCCCATTT GTGTCGTTGC AGGACGGTAA TATTGTCGGC ATTCATAGTT TATCAGACAA TGGTAATGCA GTTAATTATT TCACTGGGTT TCCTGAGAAT TTCAAAGAGG AATACTTGGA TCGTGCAGGT GATGTTGAAT GGGTCAAAGG CTGGATTCAT AACACAGATA ATATTGCTTG GGGGTCTCTT AACTTAACAA AAGGTGCACC AGAATCGTGT TTTAAGGCAA CCAAACTGAT ATCAGACATC ATCAACGGAG TAGCCTTTCA GGCGCAGGAC TACACATGGT TAACAAAGAG AATCGATGGG AACTTGAAGT GTGTTGGCAC GTGTCCAGGA AATTTGATCA CAAAGCATGT TGTGAAAGGA AAATGTCCTT TATTCCAGTT ATATTTGAAC ACAGACGAGA GAGTTAAAGC ATTCTTTGAA CCACTTCTTG GGTTCTATGG TAAGAGTTGC TTGAATAAAG AAGCATATAT AAAGGACTTT ACTAAATACT CAAGTGATAT AGTGGTTGGT GAAGTCGATA CTGATGTGTT TGAAGAGGCA ATAAATAATG TTGAAAACAT TCTTCTGAAA GGCGGGATGA CAAGATGTAA CTTTATAACT GATCCAGATG ATATTATGAA TTCATTGAAC ATGAAAGCAG CCGTTGGTGC GTTATATGGA GGGAAGAAAG AAGCGTACTT TAAGGATATG TCAGACGAAG ATGTTGAACA TTTAATATTC ATGAGTTGTA AAAGACTGTA CTTGGGAAAG ATGGGTATCT GGAATGGCTC ACTCAAAGCA GAAATACGAC CAATTGAGAA AGTCCAGGCA AATAAAACAC GATCATTCAC AGCAGCTCCA ATTGAAACAC TATTGGGTGG AAAAGTTTGT GTCGATGATT TCAACAACAA CTTTTACAGA AGGAACTTAG CAATCCCTTC AACAGTTGGG ATTACGAAGT TTTACAAAGG ATGGGATGAT CTTATGTGCT CATTGCCGGA TGGATGGATT TACTGCGACG CAGATGGTTC ACGCTTTGAT AGCTCACTAA CGCCGTATCT AATGAACGCA GTATTAAACA TTAGATTACG ATTTATGGAA GAATGGGACA TTGGACAAGA GATGCTCAAG AATTTGTACA CTGAGATCAT TTACACACCA ATCGCAACAC CCGATGGCTC AATCATTAAG AAATTTAAAG GGAATAACAG TGGGCAGCCT TCTACGGTGG TGGACAATAC ATTGATGGTG ATGCTTAGTG TTCAATATAC ATTATTAAAG AACAACATCA CATTCATGGA ACAGGAATCT ATAATTAGGT ACTTTTGCAA TGGCGATGAT TTACTAATCG CGATACATCC AGATCACAGC CATATACTGG ACTCATTCAC AAAACATTTC GCTGACTTGG GACTTGAATA TGATTTTTCA AGTCGGACCA CAAACCGAGA GGAACTATAT TTTATGTCTC ATAGAGGCTT ACTTAGAGAT GGTTTTTATA TACCCAAACT TGATAAAGAG CGTATAGTTT CCATACTTGA GTGGGATAGA GCCAAAGAGC CAGAACATCG ACTGGAAGCT ATTTGCGCCG CGATGGTAGA AGCGTGGGGC TATGATGAAC TACTACATGA GATCAGGTTA TTTTATAAGT GGGTATTAGA GCAAGCTCCA TATAACTTAA TAGCCCAAAC TGGCAAAGCA CCATACATAG CAGAAACTGC ACTTAAGAAA TTGTATATGG ATGAGCAAGC AACCGAGAGT GAGTCGGAAG AGTACATTCG ACTATATCAA ATCCTGGATG ATCGTATACC GACACCAAGC TATGTCTCAT ATCAAGCATC AGAATCAGAA GACGCTGCAA ATGTATCAAC CGATAAGCAA GTTGGAAAGA ACAAGGACAA AGACAGGGAT GTTGATGTGG GCACATCAGG CGAATTTTCG GTTCCAAAGG TTAAGATGTT GTCAGATAAA ATGCGATTGC CACGAGTTGG AAAGAAGGTG ATACTTAATG GTAAACACCT ACTATCTTAC AAGCCCGACC AAGTTGACTT ATACAACACG CGAGCGACAC ACGCACAATT CAAAACGTGG TACGAAGCAG TGAAACTCGA ATACGAATTG ACGGATGAAC AAATGAAGAT AGTTATGAAT GGATTGATGG TGTGGTGCAT CGAAAATGGA ACATCACAAA ATTTGACGGG GGTTTGGACA ATGATGGATG GTGATAACCA AATGGAATAT CCACTCAGTC CTATAATTGA TAATGCGAAA CCCACATTCA GACAGATAAT GGCACATTTC AGTGACGCAG CTGAAGCGTA CATTGAATAT AGAAATGCCA CAGAAAAATA CATGCCCCGG TATGGACTTC AGCGAAACTT AAGAGAATAC AGCTTAGCAC GTTACGCATT CGACTTTTAT GAGATGAACT CAAAGACGCC GATCCGCGCG AAGGAAGCTC ATATGCAGAT GAAAGCGGCA GCGGTTAGAG GGGTGGCTAA CCGTATGTTT GGCTTGGATG GTAACATAAG CACCGATGAT GAGAACACAG AACGACATAC AGCAGCTGAT GTGAATAAGG ATCATCACAC GCTGTTCGGT CTTCGTATGT AATAAACATA TATATATTTA ATATATAGTG TCGTGCATTA TCTTTCGTTA TATTTGAATA TGAGCAAACA TAGTGTGGTT ATACCATCGT TTGTGGCATA GTATATGATA TAACATCGCT AGCATTATTT GCACCATAAG ACTCAGTGTG GTTTCACCAC GGAAACCGGT CAAAGTGTTG TACGTTTTGT TAGGGAGAC 
Length10429
Protein Sequence
Protein Residue
A.thaliana
AGI-code
Description
TAIR curator summary
Alias
Gene coexpression
MR
MR Locus Description
1.41421 Ahg948246
3.4641 Ahg930449 Tetratricopeptide repeat (TPR)-like superfamily protein
3.4641 Ahg894755
6 Virus3111
6.7082 Ahg949089
6.9282 Virus2942
7.93725 Virus3066
8.66025 Ahg890262 Protein of unknown function (DUF594)
9 Ahg315023
9.48683 Ahg911762 nudix hydrolase homolog 18
RNA-seq
Seasonal expression (July 2011 to June 2013)
The four seasons
Growth Chamber expression