BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg311290
Length=1281
Score E
Sequences producing significant alignments: (Bits) Value
AT1G01460.1 | Symbols: ATPIPK11, PIPK11 | Phosphatidylinositol-... 1997 0.0
> AT1G01460.1 | Symbols: ATPIPK11, PIPK11 | Phosphatidylinositol-4-phosphate
5-kinase, core | chr1:168723-171165 FORWARD LENGTH=1452
Length=1452
Score = 1997 bits (1081), Expect = 0.0
Identities = 1218/1285 (95%), Gaps = 5/1285 (0%)
Strand=Plus/Plus
Query 1 ATGTTTACGCGGGAGATAACAGCAAAGGACGTGAAAGCGACTGAGAAAAACAGGATTCGA 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 158 ATGTTTACGCGGGAGATAACAGCAAAGGACGTGAAAGCCACTGAGAAAAACAGGATTCGA 217
Query 61 TACTCTTCCAAACACATTAAGCATCTTCCACCTGGAACCATTACTGAATTTGAATGGAAG 120
||||||||||||||||| || |||||||| ||||||||||||||||| || |||||||||
Sbjct 218 TACTCTTCCAAACACATAAAACATCTTCCTCCTGGAACCATTACTGAGTTCGAATGGAAG 277
Query 121 GATTATTGTCCCTTGGGATTCAGACTTATACAAGAACTTGAGGATATTAATCATGATGAA 180
|||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||
Sbjct 278 GATTATTGTCCCTTGGGATTCAGACTTATACAGGAACTTGAGGATATCAATCATGATGAG 337
Query 181 TACATGAAGTCTATCTGTAATGATGAGACATTAAGGAAGCTTTCTTCTGGCAAAGTTGGT 240
||||||||||||||||||||||||||||| ||||||||||||||| || |||||||||||
Sbjct 338 TACATGAAGTCTATCTGTAATGATGAGACCTTAAGGAAGCTTTCTACTAGCAAAGTTGGT 397
Query 241 AACATGTTCCTTCTCTCCAAAGATGACCGTTTTCTCATCAAGATTCTCCGCAAATCCGAA 300
|||||||| ||||| ||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct 398 AACATGTTTCTTCTTTCCAAAGATGACCGTTTTCTCATTAAGATTCTACGCAAATCCGAA 457
Query 301 ATCAAGGTAATACTAGAGATGTTGCCTGGTTACTTCCGTCATATCCATAAATACAGGTCA 360
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 458 ATCAAGGTTATACTAGAGATGTTGCCTGGTTACTTCCGTCATATCCATAAATACAGGTCA 517
Query 361 ACCTTGTTGTCCAAGAATTATGGAGCTCATTCTGTCAAGCCTATTGGAGGTGTTAAGACA 420
||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||
Sbjct 518 ACCTTGTTGTCCAAGAATTATGGAGCTCACTCTGTGAAGCCTATTGGAGGTGTTAAGACA 577
Query 421 TATTTTGTCGTCATGTCGAACATATTACAGTCGGATGTTTTTATGAATAAGGTCTATGAT 480
||||||||||||||||| |||||| | |||||||||||||||||||| ||||||||||||
Sbjct 578 TATTTTGTCGTCATGTCAAACATACTGCAGTCGGATGTTTTTATGAACAAGGTCTATGAT 637
Query 481 CTAAAGGGTTCATCACAAGGTCGGACTAATAAGAAGATCAAAGTGAGAGATAAAACCATT 540
|||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||
Sbjct 638 CTAAAGGGTTCATCTCAAGGTCGGACTAACAAGAAGATCAAAGTGAGAGATAAAACCATA 697
Query 541 TTGAAGGATATAGACCTTGATTTTTGTTTCTATGTGGATTCTTTGGCTAGACACCGCCTC 600
||||||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 698 TTGAAGGATATCGACCTTGATTTTTGTTTCTATGTGGATTCTTTGGCCAGACACCGTCTC 757
Query 601 ATCAAGCAAACAAAGCTAGATTGTGAACTTTTGGAAGATGAAGGCATAATGGATTATAGC 660
|| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct 758 ATTAAGCAAACGAAGCTAGATTGTGAACTTTTGGAAGATGAAGGCATCATGGATTACAGC 817
Query 661 TTAATGCTTGGTTTACAAGTGAAAGGCTCGTGTCATGGTTCAATTGATGAATTAAGCCCG 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 818 TTAATGCTTGGTTTACAAGTGAAAGGCTCGTGTCATGGTTCAATTGATGAATTAATCCCG 877
Query 721 ATATACGATAGCTTCACATCGA-GAGGCTCTGTTGACAGCAATAGCTCTAAGTTTATGAA 779
||||||| ||||||||||| | |||||||||||||||||||||||||||||||||||||
Sbjct 878 GTATACGACAGCTTCACATC-ACGAGGCTCTGTTGACAGCAATAGCTCTAAGTTTATGAA 936
Query 780 GACAGCTTCAAACTCTCCAGATAGATC-T-T-CTACAATGTATTCATGCACTCCAAGCAG 836
||||||||||||||||||||||||||| | | |||||||||||||||||||||| |||||
Sbjct 937 GACAGCTTCAAACTCTCCAGATAGATCATCTTCTACAATGTATTCATGCACTCCCAGCAG 996
Query 837 AAATTCAGTTGATAGTGAGAACTCAGTGGATAAACAATCAGTAGCAAGTATTAGCCCTAG 896
|||||||||||||||||||||||||||| ||| |||||||||||||||||| ||||||||
Sbjct 997 AAATTCAGTTGATAGTGAGAACTCAGTGAATATACAATCAGTAGCAAGTATAAGCCCTAG 1056
Query 897 TCCAGCACCAACCAGCGCTTCTGATTCTCCACATGGAAGCATTGTTTCCAGAACAAGTCT 956
|||||||| ||||| |||||||||||||||| ||| |||| ||||||||| ||||| |||
Sbjct 1057 TCCAGCACAAACCAACGCTTCTGATTCTCCATATGAAAGCCTTGTTTCCAAAACAAATCT 1116
Query 957 CACCAACATCTTCCAAAACAGCTCAAGCACAAACTTCGGGATGAAGATACCAGGACGAGC 1016
|||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||
Sbjct 1117 CACCAACATCTTCCAAAACAGCTCAAGCACTAACTTCGGTATGAAGATACCAGGACGAGC 1176
Query 1017 ACGACGGATGGGGAGAGGAGAATCAGGGAGTGTGGTGGGAAAACACATCAGAGGAGGAGG 1076
||||||| | ||||||||||||||||||||||||||||||||||| | ||||| ||||||
Sbjct 1177 ACGACGGGTTGGGAGAGGAGAATCAGGGAGTGTGGTGGGAAAACAGAGCAGAGAAGGAGG 1236
Query 1077 AGAAGAATGGTACGATGTGATATTGTATCTTGGGATCATAGACATTTTCCAAGACTATGG 1136
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| ||
Sbjct 1237 AGAAGAATGGTACGATGTGATTTTGTATCTTGGGATTATAGACATTTTCCAAGACTACGG 1296
Query 1137 TGTGAGAAAACGCATTGAACATTGTTACAAGTCAATTCAACACAGCTCTAAGACGATCTC 1196
||||||||||||| |||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1297 TGTGAGAAAACGCCTTGAACATTGTTACAAGTCAATTCAACACAGCTCTAAGACAATCTC 1356
Query 1197 AGCCGTCCATCCCAAGATGTACTCTTCTCGTTTTCAAGACTTTGTCTCTCAGATCTTCTT 1256
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 1357 AGCCGTCCATCCCAAGATGTATTCTTCTCGTTTCCAAGACTTTGTCTCTCAGATCTTCTT 1416
Query 1257 ACCAGACGAAGATCCTTCTCGCTGA 1281
|||||||||||||||||||| ||||
Sbjct 1417 ACCAGACGAAGATCCTTCTCACTGA 1441
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 63001683975
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5