BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg311398 Length=2220 Score E Sequences producing significant alignments: (Bits) Value AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-68... 2852 0.0 AT1G43140.1 | Symbols: | Cullin family protein | chr1:16232785... 1735 0.0 AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:112... 1598 0.0 AT1G59800.1 | Symbols: | Cullin family protein | chr1:22004964... 357 3e-97 > AT1G02980.1 | Symbols: CUL2, ATCUL2 | cullin 2 | chr1:677869-681310 FORWARD LENGTH=2327 Length=2327 Score = 2852 bits (1544), Expect = 0.0 Identities = 2006/2227 (90%), Gaps = 39/2227 (2%) Strand=Plus/Plus Query 18 TGTGTTGGAGGAAGGATGGCCCT-TCATGGAGGCTGGTGTTACAAAGCTACATAGGATTC 76 ||||||||||| ||||||| || ||||||||||||||||| |||||||||| | ||||| Sbjct 18 TGTGTTGGAGGCAGGATGG-TCTGTCATGGAGGCTGGTGTTGCAAAGCTACAAAAGATTC 76 Query 77 TGGAAGAATTGCC---TGAGCCAGCATTTGAGTCGGTTCAATATATGAATCTGTACACGA 133 |||||||| |||| ||||||| ||||||| |||||||| |||| | |||||||||| Sbjct 77 TGGAAGAAGTGCCTGATGAGCCACCATTTGACCCGGTTCAACGTATGCAGCTGTACACGA 136 Query 134 CTATCTACAATATGTGTGTCCAGAAACCTCCTCATGATTTCTCACAGCAGCTTTATGATA 193 || || ||||| ||||| ||||||||||||| |||||| |||||||||| | |||||| Sbjct 137 CTGTCCACAATCTGTGTACCCAGAAACCTCCTAATGATTACTCACAGCAGATCTATGATC 196 Query 194 AGTATCGTGGAGTAAT-TGATGATTACAATAAACAAACAGTGTTGCCGGCTATAAG-GAA 251 |||| ||||||| || || |||||||||||||||||| ||||||||||||||| | | | Sbjct 197 GGTATGGTGGAGT-ATATGTTGATTACAATAAACAAACTGTGTTGCCGGCTATACGTG-A 254 Query 252 GAAGCATGGTGAATATATGCTGAGAGAGCTTGTTAAGAGATGGGCTAACCATAAAGTTCT 311 ||||||||||||||||||| ||||||||||||||||||||||||| ||||| ||| |||| Sbjct 255 GAAGCATGGTGAATATATGTTGAGAGAGCTTGTTAAGAGATGGGCCAACCAGAAAATTCT 314 Query 312 GGTTAGATGGTTATCCCGCTTCTTCGACTATCTTGACCGTTACTTTGT--TCCTCGGAGA 369 |||||||||||||||| ||||||||| ||||||||||||| ||| | || |||| | Sbjct 315 TGTTAGATGGTTATCCCACTTCTTCGAATATCTTGACCGTT--TTTATACTCGTCGGGGG 372 Query 370 AATCTTCTAACACTGAATAG-TGTTGGCTTGACATCCTTTCGCGACCTGGTTTATCAAGA 428 || || |||||||| | | ||||||||| | |||||| |||||||||||||||||||| Sbjct 373 TCTCATCCAACACTGAGT-GCTGTTGGCTTCATATCCTTCCGCGACCTGGTTTATCAAGA 431 Query 429 GATACAGTCCAATGCCAAAGACGCTGTACTAGAACTTATTCATAAAGAACGTGAGGGTGA 488 | |||||||||| ||||||||||||||||||| |||||||||||||||||| ||||| || Sbjct 432 GTTACAGTCCAAGGCCAAAGACGCTGTACTAGCACTTATTCATAAAGAACGCGAGGGCGA 491 Query 489 ACAGATTGATAGATCACTATTGAAAAACGTAATAGATGTCTATTGTGGGAATGGAATGGG 548 ||||||||||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 492 ACAGATTGATAGAGCACTATTGAAAAACGTAATAGATGTCTATTGTGGGAATGGGATGGG 551 Query 549 AGAGATGGTAAAATACGAAGAGGATTTTGAAAGCTTCTTGCTTCAAGATTCTGCATCTTA 608 |||| |||| ||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 552 AGAGCTGGTTAAATACGAAGAGGATTTTGAAAGCTTCTTGCTTGAAGATTCTGCATCTTA 611 Query 609 CTATTCTCGCAAGGCCTCAAAGTGGAGCCAGGAGGATTCTTGTCCTGATTACATGCGAAA 668 ||| |||||||| ||||||| ||||| ||||||| |||||||||||||||||||| ||| Sbjct 612 CTACTCTCGCAACGCCTCAAGGTGGAACCAGGAGAATTCTTGTCCTGATTACATGATAAA 671 Query 669 GGCTGAGGAGTGTCTAAAACTGGAGAAGGAGAGAGTCACTAACTACCTTCATTCAACCAC 728 ||||||||||| ||||| ||||||||||||||||||||| |||||||||||||||||||| Sbjct 672 GGCTGAGGAGTCTCTAAGACTGGAGAAGGAGAGAGTCACCAACTACCTTCATTCAACCAC 731 Query 729 TGAGCCGAAATTACTTGGGAAAGTACAAAATGAGTTGTTGGTAGTGGTTGCAAAACAGCT 788 |||||||||| || ||| ||||||||||||||| ||||||||||||||||||||||| || Sbjct 732 TGAGCCGAAACTAGTTGCGAAAGTACAAAATGAATTGTTGGTAGTGGTTGCAAAACAACT 791 Query 789 TATAGAAAATGAGCAGTCAGGGTGCCGTGCATTGCTAAGAGATGACAAGATGGATGATCT 848 ||||||||||||||| ||||| |||||||||||| ||||||| ||||||||||||||||| Sbjct 792 TATAGAAAATGAGCACTCAGGATGCCGTGCATTGTTAAGAGACGACAAGATGGATGATCT 851 Query 849 CTCCAGGATGTACAAGCTTTATCAACCAAT-CCTTCAAGGGTTGGATCCTGTTGCAGACT 907 | |||||||||||| ||||||||| ||||| || |||||| |||||||||||||||||| Sbjct 852 CGCCAGGATGTACAGGCTTTATCATCCAATACC-GCAAGGGCTGGATCCTGTTGCAGACT 910 Query 908 TATTCAAGCAGCATGTTACTGCAGAGGGAAATGCCCTTATCAAACAAGCCGCCGACGCAG 967 |||||||||| ||| |||||| |||||||| |||||||||||||||||| |||| |||| Sbjct 911 TATTCAAGCAACATATTACTGTAGAGGGAAGTGCCCTTATCAAACAAGCTACCGAGGCAG 970 Query 968 CTACTAATCAGGATGCAAGTGCTGGTGG-C-----GTGCAGGACCAGGTGCTTGTCAGA- 1020 ||||| || ||| ||||||| || |||| | |||||||||||||||||| ||||| Sbjct 971 CTACTGATAAGGCTGCAAGTACTAGTGGACTGAAGGTGCAGGACCAGGTGCTTATCAGAC 1030 Query 1021 AAAGAGATTGAGCTACACGATAAATACATGGTCTATGTCGATGAGTGTTTTCAGAAACAC 1080 || | ||||| ||||||||||||| ||||||||| |||||||||||||||||||||||| Sbjct 1031 AATTA-ATTGACCTACACGATAAATTCATGGTCTACGTCGATGAGTGTTTTCAGAAACAC 1089 Query 1081 AGCCTCTTCCATAAGGCATTAAAAGAGGCATTTGAAGTCTTCTGTAACAAAACAGTGGCT 1140 |||||||||||||||||||| || |||||||||||||||||||||||||| ||||||||| Sbjct 1090 AGCCTCTTCCATAAGGCATTGAAGGAGGCATTTGAAGTCTTCTGTAACAAGACAGTGGCT 1149 Query 1141 GGAGTGTCTAGTGCAGAAATACTTGCAACCTATTGTGATAATATCCTCAAGACAAAAGGT 1200 |||||||| ||||||||||| |||||||| ||||| ||||||||||||||||| ||| Sbjct 1150 GGAGTGTCCAGTGCAGAAATTCTTGCAACGTATTGCGATAATATCCTCAAGACGGGAGGG 1209 Query 1201 GGAAGTGAGAAGCTTAGTGAA-GAAGTTAC-TGAAATTACGCTTGAGAAAGTGGTTAAGT 1258 |||| |||||||||| | || |||| | | |||| |||||||||||||||||||||||| Sbjct 1210 GGAATTGAGAAGCTT-GAAAATGAAGAT-CTTGAACTTACGCTTGAGAAAGTGGTTAAGT 1267 Query 1259 TGCTTGTTTATATAAGCGACAAGGATCTTTTCGCCGAGTTTTACAGGAAGAAACAAGCCC 1318 |||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||||| Sbjct 1268 TGCTTGTTTATATAAGTGACAAGGATCTTTTCGCCGAGTTTTTCAGGAAGAAACAAGCCC 1327 Query 1319 GTCGGCTCTTATTTGATCGCAGCGGTAATGACGAGCACGAAAGAAGTATACTTACAAAGT 1378 |||||||||| |||||||||| |||||||||| | |||||||||||| |||||||||||| Sbjct 1328 GTCGGCTCTTGTTTGATCGCAACGGTAATGACTACCACGAAAGAAGTTTACTTACAAAGT 1387 Query 1379 TAAAAGAACTACTCGGGGGGCAGTTTACTTCTAAGATGGAGGGCATGGTGACGGATATAA 1438 | |||||||||||||| | |||||||||||||||||||||||||||| |||||||||| | Sbjct 1388 TTAAAGAACTACTCGGTGCGCAGTTTACTTCTAAGATGGAGGGCATGCTGACGGATATGA 1447 Query 1439 CATTGGCAAAAGAGCAGCAAACCAACTTCGCT-G-ATTATCTATCAGCTAGCCTGACCAC 1496 ||||||||||||| || ||||||||||||| | | ||| | |||||| || | ||||| Sbjct 1448 CATTGGCAAAAGAACACCAAACCAACTTCG-TGGAATT-TTTATCAGTTAACAAGACCAA 1505 Query 1497 AAAGCTGGGGATTGATTTGACTGTCACTGTTCTTACTACTGGTTTCTGGCCAAGTTACAA 1556 |||||||||||| ||||| ||||||||||| |||||||||||||| |||||||||||||| Sbjct 1506 AAAGCTGGGGATGGATTTCACTGTCACTGTACTTACTACTGGTTTTTGGCCAAGTTACAA 1565 Query 1557 AACATCTGACCTCAATCTACCCATTGAAATGGTCAACTGTGTTGAAGCTTTTAAAACCTT 1616 |||| | ||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1566 AACAACCGACCTCAATCTACCCATTGAAATGGTCAACTGTGTTGAAGCTTTTAAGGCCTA 1625 Query 1617 TTATGGAACAATAACCAA-ACACAGGAGACTTTCGTGGATTTATTCTCTGGGAACTTGTC 1675 ||||||||||| |||||| | |||||||||||| |||||||||||| | |||||||||| Sbjct 1626 TTATGGAACAAAAACCAATTC-CAGGAGACTTTCATGGATTTATTCTTTAGGAACTTGTC 1684 Query 1676 ACATT-TCTGGAAAATTCGATAAAAAATC-ATTGGAGTTAGTCGTTTCCACCTACCAGGC 1733 | || |||||||||||||||||||| | ||| ||| |||| ||| ||||||||||||| Sbjct 1685 A-GTTAGCTGGAAAATTCGATAAAAAAACAATT-GAGATAGTAGTTACCACCTACCAGGC 1742 Query 1734 TGCGGTGCTTTTGCTCTTCAACAACGCAGAGAGATTGAGCTACACTGAGATGTTGGAGCA 1793 ||| |||||||| |||||||||||| |||||||||| |||||||||||||| |||||||| Sbjct 1743 TGCTGTGCTTTTACTCTTCAACAACACAGAGAGATTAAGCTACACTGAGATCTTGGAGCA 1802 Query 1794 GCTAAACCTTAGCCATGAAGATCTTGTCAGGCTGCTTCATTCACTGTCATGCGGGAAGTA 1853 ||||||||| ||||||||||||||| |||||||||||||||||| |||||| ||||| Sbjct 1803 GCTAAACCTCGGCCATGAAGATCTTGCCAGGCTGCTTCATTCACTATCATGCTTAAAGTA 1862 Query 1854 CAAGATTCTTATAAAGGAACCAATGTCGAGAACCATCTCTAAAACGGATACGTTTGAATT 1913 |||||||||||||||||||||||||||||||| |||||| || || ||||| |||||||| Sbjct 1863 CAAGATTCTTATAAAGGAACCAATGTCGAGAAACATCTCCAACACCGATACCTTTGAATT 1922 Query 1914 CAACTCCAAGTTCACCGATAAGATGAGGAGAATTAGGGTGCCTCTGCCTCCAATGGATGA 1973 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1923 CAACTCCAAGTTCACCGATAAGATGAGGAGAATTAGGGTGCCTCTGCCTCCGATGGATGA 1982 Query 1974 GAGGAAGAAAGTTGTTGAAGATGTTGATAAAGATAGACGCTATGCAATAGATGCAGCTCT 2033 |||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||| Sbjct 1983 GAGGAAGAAAATTGTTGAAGATGTTGATAAAGATAGACGCTATGCAATTGATGCAGCTCT 2042 Query 2034 TGTTCGGATCATGAAGAGCAGAAAAGTGTTGGGGCATCAACAGTTAGTCTCTGAATGTGT 2093 |||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| Sbjct 2043 TGTTCGGATCATGAAGAGTAGAAAAGTGTTGGGGCATCAACAGTTGGTCTCTGAATGTGT 2102 Query 2094 TGAGCATCTTAGCAAAATGTTCAAGCCTGATATAAAGATGATAAAGAAACGGATTGAGGA 2153 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2103 TGAGCATCTCAGCAAAATGTTCAAGCCTGATATAAAGATGATAAAGAAACGGATTGAGGA 2162 Query 2154 CTTGATCAGCAGAGATTATTTGGAGAGGGATAGCGAAAATCCCAACACTTTCAAGTATGT 2213 |||||||||||||||||| ||||||||||||| ||| ||||||||||||||||||||| | Sbjct 2163 CTTGATCAGCAGAGATTACTTGGAGAGGGATACCGACAATCCCAACACTTTCAAGTATTT 2222 Query 2214 GGCTTAG 2220 ||||||| Sbjct 2223 GGCTTAG 2229 > AT1G43140.1 | Symbols: | Cullin family protein | chr1:16232785-16236109 FORWARD LENGTH=2166 Length=2166 Score = 1735 bits (939), Expect = 0.0 Identities = 1218/1350 (90%), Gaps = 29/1350 (2%) Strand=Plus/Plus Query 6 GAAGG-GTATAATTGTGTTGGAGGAAGGATGGCCCT-TCATGGAGGCTGGTGTTACAAAG 63 ||||| || |||| | ||||||||||||||| || ||||| || |||||||| ||||| Sbjct 33 GAAGGAGT-TAATCCTATTGGAGGAAGGATGG-TCTGTCATGAAGACTGGTGTTGCAAAG 90 Query 64 CTACATAGGATTCTGGAAGAATTGCCTGAGCCAGCATTTGA-GTCGGTTCAATATATGAA 122 ||||| |||||||| ||||| ||| |||||||| | ||||| ||| ||||||||| || Sbjct 91 CTACAAAGGATTCTAGAAGATTTGTCTGAGCCACCGTTTGACCCCGG-TCAATATATCAA 149 Query 123 TCTGTACACGACTATCTACAATATGTGTGTCCAGA-AACCTCCTCATGATTTCTCAC-AG 180 ||||||||||| ||||||| |||||||| |||| | |||||||| |||||| ||||| || Sbjct 150 TCTGTACACGATTATCTACGATATGTGTCTCCA-ACAACCTCCTAATGATTACTCACAAG 208 Query 181 CAGCTTTATGATAAGTATCGTGGAGTAATTGATGATTACAATAAACAAACAGTGTTGCCG 240 |||||||| |||||||||||||||| ||||| ||||||||||| |||| || |||||| Sbjct 209 -AGCTTTATAATAAGTATCGTGGAGTGGTTGATCATTACAATAAAGAAACTGTTTTGCCG 267 Query 241 GCTATAAGGAAGAAGCATGGTGAATATATGCTGAGAGAGCTTGTTAAGAGATGGGCTAAC 300 |||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||| Sbjct 268 TCTATGAGGGAGAGGCATGGTGAATATATGCTGAGAGAGCTTGTTAAGAGATGGGCTAAC 327 Query 301 CATAAAGTTCTGGTTAGATGGTTATCCCGCTTCTTCGACTATCTTGACCGTTACTTTGTT 360 |||||| ||||||||||||||||||| ||||||| | ||||||||||||| || |||| Sbjct 328 CATAAAATTCTGGTTAGATGGTTATCTCGCTTCTGCTTTTATCTTGACCGTTTCTATGTT 387 Query 361 CCTCGGAGAAATCTTCTAACACTGAAT-AGTGTTGGCTTGACATCCTTTCGCGACCTGGT 419 |||||||| ||||| |||||||||| | ||||||||| |||||||||| |||||| || Sbjct 388 GCTCGGAGAGGTCTTCCAACACTGAATGA-TGTTGGCTTCACATCCTTTCACGACCTAGT 446 Query 420 TTATCAAGAGATACAGTCCAATGCCAAAGACGCTG-TACTAGAACTTATTCATAAAGAAC 478 ||||||||||||||||||| | |||||||| | || |||||| ||||||||||||||||| Sbjct 447 TTATCAAGAGATACAGTCCGAGGCCAAAGATG-TGCTACTAGCACTTATTCATAAAGAAC 505 Query 479 GTGAGGGTGAACAGATTGATAGATCACTATTGAAAAACGTAATAGATGTCTATTGTGGGA 538 |||| || ||||||||||||||| ||||| |||||||||||||||||||||||||||||| Sbjct 506 GTGAAGGCGAACAGATTGATAGAACACTAGTGAAAAACGTAATAGATGTCTATTGTGGGA 565 Query 539 ATGGAATGGGAGAGATGGTAAAATACGAAGAGGATTTTGAAAGCTTCTTGCTTCAAGATT 598 |||| | ||| ||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 566 ATGGGGTTGGACAGATGGTAATATACGAAGAGGATTTTGAAAGCTTCTTGCTTCAAGATA 625 Query 599 CTGCATCTTACTATTCTCGCAAGGCCTCAAAGTGGAGCCAGGAGGATTCTTGTCCTGATT 658 |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| Sbjct 626 CTGCATCTTACTATTCTCGCAAGGCCTCAAGGTGGAGCCAGGAGGATTCTTGTCCTGATT 685 Query 659 ACATGCGAAAGGCTGAGGAGTGTCTAAAACTGGAGAAGGAGAGAGTCACTAACTACCTTC 718 |||||| ||||||||| |||||||| ||| |||||||||| ||||||||||||||||||| Sbjct 686 ACATGCTAAAGGCTGAAGAGTGTCTTAAATTGGAGAAGGAAAGAGTCACTAACTACCTTC 745 Query 719 ATTCAACCACTGAGCCGAAATTACTTGGGAAAGTACAAAATGAGTTGTTGGTAGTGGTTG 778 |||| ||||||||||| ||| || ||| ||||||||||||||| |||||||||||||||| Sbjct 746 ATTCTACCACTGAGCCCAAACTAGTTGAGAAAGTACAAAATGAATTGTTGGTAGTGGTTG 805 Query 779 CAAAACAGCTTATAGAAAATGAGCAGTCAGGGTGCCGTGCATTGCTAAGAGATGACAAGA 838 ||||||||||||||||||||||||| || ||||||| ||||||| ||||||||||||||| Sbjct 806 CAAAACAGCTTATAGAAAATGAGCACTCTGGGTGCCTTGCATTGTTAAGAGATGACAAGA 865 Query 839 TGGATGATCTCTCCAGGATGTACAAGCTTTATCAACCAATCCTTCAAGGGTTGGATCCTG 898 ||| ||||||||| |||||||||| |||||||| | ||||| ||||||||||| ||| Sbjct 866 TGGGTGATCTCTCGAGGATGTACAGGCTTTATCGTCTAATCCCGCAAGGGTTGGAACCTA 925 Query 899 TTGCAGACTTATTCAAGCAGCATGTTACTGCAGAGGGAAATGCCCTTATCAAACAAGCCG 958 |||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||| Sbjct 926 TTGCAGACTTATTCAAGCAGCATGTTACTGCAGAAGGAAATGCCCTTATCAAACAAGCCG 985 Query 959 CCGACGCAGCTACTAATCAGGATGCAAGTGCTGGTGGCGTGCAGGACCAGGTGCTTGTCA 1018 ||||||||||||||||||| |||||||||||| || | ||| ||||||||| Sbjct 986 CCGACGCAGCTACTAATCAAGATGCAAGTGCTAGT--C----AGG------TGCTTGTCA 1033 Query 1019 GAAAAGAGATTGAGCTACACGATAAATACATGGTCTATGTCGATGAGTGTTTTCAGAAAC 1078 ||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||||| Sbjct 1034 GAAAAGAGATTGAACTACACGATAAATACATGGTCTATGTAGATGAGTGTTTTCAGAAAC 1093 Query 1079 ACAGCCTCTTCCATAAGGC-ATTAAAAGAGGCATTTGAAGTCTTCTGTAACAAAACAGTG 1137 ||||||||||||||||| | |||||||||||| ||||||||||||||||||||||||||| Sbjct 1094 ACAGCCTCTTCCATAAG-CTATTAAAAGAGGCGTTTGAAGTCTTCTGTAACAAAACAGTG 1152 Query 1138 GCTGGAGTGTCTAGTGCAGAAATACTTGCAACCTATTGTGATAATATCCTCAAGACAAAA 1197 ||||||| ||| |||||||||||||||||||||||||||||||||||||||||||| | | Sbjct 1153 GCTGGAGCGTCCAGTGCAGAAATACTTGCAACCTATTGTGATAATATCCTCAAGACCAGA 1212 Query 1198 GGTGGAAGTGAGAAGCTTAGTGAAGAAGTTACTGAAATTACGCTTGAGAAAGTGGTTAAG 1257 ||||||||||||||||||||||| |||| |||||||||||||||||||||||| ||||| Sbjct 1213 GGTGGAAGTGAGAAGCTTAGTGATGAAGCTACTGAAATTACGCTTGAGAAAGTAGTTAAT 1272 Query 1258 TTGCTTGTTTATATAAGCGACAAGGATCTTTTCGCCGAGTTTTACAGGAAGAAACAAGCC 1317 ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| Sbjct 1273 TTGCTTGTTTATATAAGTGACAAGGATCTTTTCGCCGAGTTTTACAGGAAGAAACAAGCT 1332 Query 1318 CGTCGGCTCTTATTTGATCGCAGCGGTAAT 1347 |||||||||||||||||||||||||| ||| Sbjct 1333 CGTCGGCTCTTATTTGATCGCAGCGG-AAT 1361 Score = 1136 bits (615), Expect = 0.0 Identities = 742/802 (93%), Gaps = 14/802 (2%) Strand=Plus/Plus Query 1426 GTGACGGATATAACATTGGCAAAAGAGCAGCAAACCAACTTCGCT-GATTATCTATCAGC 1484 |||||||||||||||||||||| ||| | ||||||||||||| | |||||| ||||||| Sbjct 1372 GTGACGGATATAACATTGGCAAGAGAACTCCAAACCAACTTCG-TGGATTATTTATCAGC 1430 Query 1485 TAGCCTGACCACAAAGCTGGGGATTGATTTGACTGTCACTGTTCTTACTACTGGTTTCTG 1544 | | |||| |||||||||||||||||||| |||||||||||||||||||||||||| || Sbjct 1431 AAACATGACAACAAAGCTGGGGATTGATTTTACTGTCACTGTTCTTACTACTGGTTTTTG 1490 Query 1545 GCCAAGTTACAAAACATCTGACCTCAATCTACCCATTGAAATGGTCAACTGTGTTGAAGC 1604 |||||||||||||||| | ||||| |||||||||| |||||||||||||||||||||||| Sbjct 1491 GCCAAGTTACAAAACAACAGACCTTAATCTACCCACTGAAATGGTCAACTGTGTTGAAGC 1550 Query 1605 TTTTAAAACCTTTTATGGAACAATAACCAA-ACACAGGAGACTTTCGTGGATTTATTCTC 1663 |||||| |||||||||||||| |||||| | |||||||||||| ||||||||||||| Sbjct 1551 TTTTAAGGTCTTTTATGGAACAAAAACCAATTC-CAGGAGACTTTCATGGATTTATTCTC 1609 Query 1664 TGGGAACTTGTCACATTTC-TGGAAAATTCGATAAAAAATCATTGGAGTTAGTCGTTTCC 1722 | ||||||||||||| ||| |||||||||||| |||||| || ||||||||||||||||| Sbjct 1610 TTGGAACTTGTCACA-TTCTTGGAAAATTCGAGAAAAAAACAATGGAGTTAGTCGTTTCC 1668 Query 1723 ACCTACCAGGCTGCGGTGCTTTTGCTCTTCAACAACGCAGAGAGATTGAGCTACACTGAG 1782 || ||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||| Sbjct 1669 ACGTACCAGGCTGCTGTGCTTTTGCTCTTCAACAACGCAGAGAGATTAAGCTACACCGAG 1728 Query 1783 ATGTT-GGAGCAGCTAAACCTTAGCCATGAAGATCTTGTCAGGCTGCTTCATTCACTGTC 1841 || || |||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 1729 AT-TTCAGAGCAGCTAAACCTCAGCCATGAAGATCTTGTCAGGCTGCTTCATTCACTGTC 1787 Query 1842 ATGCGGGAAGTACAAGATTCTTATAAAGGAACCAATGTCGAGAACCATCTCTAAAACGGA 1901 |||| |||||||||||||||||||||||||||||||||||||||||||| ||||| || Sbjct 1788 ATGCTTAAAGTACAAGATTCTTATAAAGGAACCAATGTCGAGAACCATCTCGAAAACCGA 1847 Query 1902 TACGTTT-GAATTCAACTCCAAGTTCACCGATAAGATGAGG-AGAATTAGGGTGCCTCTG 1959 ||| ||| |||||||||||||||||||| ||||||||| || || |||||||||||| || Sbjct 1848 TAC-TTTCGAATTCAACTCCAAGTTCACAGATAAGATGCGGAAG-ATTAGGGTGCCTTTG 1905 Query 1960 CCTCCAATGGATGAGAGGAAGAAAGTTGTTGAAGATGTTGATAAAGATAGACGCTATGCA 2019 |||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| Sbjct 1906 CCTCCAATGGATGAGAGGAAGAAAGTAGTTGAAGATGTTGATAAAGATAGACGCTATGCA 1965 Query 2020 ATAGATGCAGCTCTTGTTCGGATCATGAAGAGCAGAAAAGTGTTGGGGCATCAACAGTTA 2079 |||||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||| Sbjct 1966 ATAGATGCAGCTCTTGTTCGGATCATGAAGAGTAGAAAAGTGTTGGCGCATCAACAGTTA 2025 Query 2080 GTCTCTGAATGTGTTGAGCATCTTAGCAAAATGTTCAAGCCTGATATAAAGATGATAAAG 2139 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2026 GTCTCTGAATGTGTTGAGCATCTTAGCAAAATGTTCAAGCCTGATATAAAGATGATAAAG 2085 Query 2140 AAACGGATTGAGGACTTGATCAGCAGAGATTATTTGGAGAGGGATAGC-GAAAATCCCAA 2198 |||||||||||||||||||||| |||||||||||||||||||||| | |||||| |||| Sbjct 2086 AAACGGATTGAGGACTTGATCAATAGAGATTATTTGGAGAGGGATA-CAGAAAATGCCAA 2144 Query 2199 CACTTTCAAGTATGTGGCTTAG 2220 ||||||||||||||| |||||| Sbjct 2145 CACTTTCAAGTATGTAGCTTAG 2166 > AT4G02570.1 | Symbols: ATCUL1, CUL1, AXR6 | cullin 1 | chr4:1128622-1133696 FORWARD LENGTH=2747 Length=2747 Score = 1598 bits (865), Expect = 0.0 Identities = 1802/2246 (80%), Gaps = 97/2246 (4%) Strand=Plus/Plus Query 22 TTGGAGGAAGGATGGCCCT-TCATGGAGGCTGGTGTTACAAAGCTACATA-GGATTCTGG 79 |||||| |||||||| || | ||| || |||| |||| ||||| | | ||||||||| Sbjct 291 TTGGAGCAAGGATGGGACTAT-ATGCAGACTGGAATTACTAAGCT-GAAACGGATTCTGG 348 Query 80 AAGAATTGCCTGAGCCAGCATTTGAGTCGGTTCAATATATGAAT-CTGTACACGACTATC 138 ||| |||| ||||||||||||||| || | ||||||||| || || || ||||||||| Sbjct 349 AAGGATTGAATGAGCCAGCATTTGACTCTGAGCAATATATG-ATGCTTTATACGACTATC 407 Query 139 TACAATATGTGTGTCCAGAAACCTCCTCATGATTTCTCACAGCAGCTTTATGATAAGTAT 198 ||||| ||||| |||||||||||||||||||| |||||||||||||||||| |||||| Sbjct 408 TACAACATGTGCACCCAGAAACCTCCTCATGATTACTCACAGCAGCTTTATGACAAGTAT 467 Query 199 CGTGG-AGTAATTGATGATTACAATAAAC-AAACAGTGTTGCCGGC-TATAAGGAAGAAG 255 || || || | |||| || || || ||| |||||| ||||| || | | ||| ||||| Sbjct 468 CG-GGAAGCATTTGAGGAATA-TATTAACTCAACAGTTTTGCCTGCGT-TGAGGGAGAAG 524 Query 256 CATGGTGAATATATGCTGAGAGAGCT-TGTTAAGAGATGGGCTAACCATAAAGTTCTGGT 314 |||| ||| | ||||||| | ||||| | |||| |||||| | ||||||||||| |||| Sbjct 525 CATGATGAGTTTATGCTGCGGGAGCTAT-TTAAAAGATGGTCAAACCATAAAGTAATGGT 583 Query 315 TAGATGGTTATCCCGCTTCTTCGACTATCTTGACCGTTACTTTGTTCCTCGGAGA-AATC 373 |||||| |||||||||||||| |||| |||||||||||||| || |||||||| | | Sbjct 584 CAGATGGCTATCCCGCTTCTTCTACTACCTTGACCGTTACTTCATTGCTCGGAGATCA-C 642 Query 374 TTCTAACACTGAATAG-TGTTGGCTTGACATCCTTTCGCGACCTGGTTTATCAA-GAGAT 431 ||| | |||||||| | |||||| |||||| ||| || |||||||||||| || ||| | Sbjct 643 TTCCACCACTGAAT-GAAGTTGGCCTGACATGCTTCCGTGACCTGGTTTAT-AATGAGCT 700 Query 432 ACAGTCCAATGCCAAAGACGCTGTACTAGAACTTATTCATAAAGAACGTGAGGGTGAACA 491 ||| || || | |||| | |||||| ||| ||| || |||||||||| ||||| || || Sbjct 701 ACATTCTAAGGTCAAACAAGCTGTAATAGCTCTTGTTGATAAAGAACGGGAGGGCGAGCA 760 Query 492 GATTGATAGATCACTATTGAAAAACGTAATAGATGTCTATTGT-GGGAATGGAATGGGAG 550 ||||||||| | || ||||||||||| ||||| |||| ||| | || ||||||||| | Sbjct 761 GATTGATAGGGCCCTGCTGAAAAACGTATTAGATATCTA-TGTAGAGATTGGAATGGG-G 818 Query 551 -AGATGGTA-AAATACGAAGAGGATTTTGAAAGCTTCTTGCTTCAAGATTCTGCATCTTA 608 |||||| | | || ||||| ||||||||||||||| ||||||||||| || | || || Sbjct 819 CAGATGG-AGAGGTATGAAGAAGATTTTGAAAGCTTCATGCTTCAAGATACTTCTTCGTA 877 Query 609 CTATTCTCGCAAGGCCTCAAAG-TGGAGCCAGGAGGATTCTTGTCCTGATTACATG-CGA 666 |||||||||||||| || ||| |||| ||||| |||||||| |||||||||||| | Sbjct 878 TTATTCTCGCAAGGCATC-AAGCTGGATTCAGGAAGATTCTTGCCCTGATTACATGTTG- 935 Query 667 AAGGCTGAGGAGTGTCTAAA-ACTGGAGAAGGAGAGAGTCACTAACTACCTTCATTCAAC 725 ||| |||| || |||||||| | ||||| ||||||||| || ||||||| || |||| Sbjct 936 AAGTCTGAAGAATGTCTAAAGA-AGGAGAGGGAGAGAGTGGCTCACTACCTACACTCAAG 994 Query 726 CACTGAGCCGAAA-TTACTTGGGAAAGTACAAAATGAGTTGTTGGTAGTGGTTGCAAAAC 784 || |||||| ||| | ||| |||||||||| |||| ||| |||| ||| |||||| | Sbjct 995 CAGTGAGCC-AAAGCTGGTTGAGAAAGTACAACATGAATTGCTGGTTGTGTTTGCAAGTC 1053 Query 785 AGCTTATAGAAAATGAGCAGTCAGGGTGCCGTGCATTGCTAAGAGATGACAAGATGGATG 844 ||||| ||||||| || || ||||||||||||||||||||||||||||||||| |||||| Sbjct 1054 AGCTTCTAGAAAAAGAACACTCAGGGTGCCGTGCATTGCTAAGAGATGACAAGGTGGATG 1113 Query 845 ATCTCTCCAGGATGTACAAGCTTTATCA-ACCAATCCTT-CAAGGGTTGGATCCTGTTGC 902 |||||||||||||||||| |||||| || | ||| || | ||| ||||| |||||||| Sbjct 1114 ATCTCTCCAGGATGTACAGGCTTTACCATA-AAAT-TTTGCGAGGCTTGGAACCTGTTGC 1171 Query 903 AGACTTATTCAAGCAGCATGTTACTGCAGAGGGAAATGCCCTTATCAAACAAGCCGCCGA 962 | || | || ||||||||||| || |||||||| || || ||| || |||| |||| || Sbjct 1172 AAACATCTTTAAGCAGCATGTCACAGCAGAGGGTAACGCTCTTGTCCAACAGGCCGAAGA 1231 Query 963 CGCAGCTACTAATCAGGATGCAAGTGCTGGTGGCGTGCAGGACCAGGTGCTTGTCAGAAA 1022 | | ||||||||||||| ||||| | ||| | |||| ||||| ||||| ||| ||||||| Sbjct 1232 CACGGCTACTAATCAGGTTGCAAATACTGCTAGCGTCCAGGAACAGGTTCTTATCAGAAA 1291 Query 1023 AGAGATTGAGCTACACGATAAATACATGGTCTATGTCGA-TGAGTGTTTTCAGAAACACA 1081 || |||||| || || |||||||||||||| |||||| | |||||||| ||||| |||| Sbjct 1292 AGTGATTGAACTTCATGATAAATACATGGTATATGTC-ACCGAGTGTTTCCAGAACCACA 1350 Query 1082 GCCTCTTCCATAAGGCATTAAAAGAGGCATTTGAAG-TCTTCTGTAACAAAACAGTGGCT 1140 ||||||||||||||| || ||||||||||||| || | || ||||||||||| || ||| Sbjct 1351 CCCTCTTCCATAAGGCTTTGAAAGAGGCATTTG-AGATTTTTTGTAACAAAACGGTTGCT 1409 Query 1141 GG-AGTGTCTAGTGCAGAAATACTTGCAACCTATTGTGATAATATCCTCAAGACAAAAGG 1199 || ||| || ||||||||| |||||||||| | ||| || ||||| ||| | | ||| || Sbjct 1410 GGAAGT-TCAAGTGCAGAACTACTTGCAACATTTTGCGACAATATTCTC-A-A-AAAGGG 1465 Query 1200 TGGAAGTGAGAAGCTTAGTGAAGAAGTTACT-GAA-ATTACGCTTGAGAAAGTGGTTAAG 1257 |||||||| ||||| ||||| |||| || | ||| | |||||||||||| || || || Sbjct 1466 GGGAAGTGAAAAGCTGAGTGATGAAGCTA-TCGAAGA-TACGCTTGAGAAGGTTGTCAAA 1523 Query 1258 TTGCTTGTTTATATAAGCGACAAGGATCTTTTCGCCGAGTTTTACAGGAAGAAACAAGCC 1317 ||||||| || ||||| ||||||||||||||||| ||||| ||||||||||| | ||| Sbjct 1524 TTGCTTGCATACATAAGTGACAAGGATCTTTTCGCTGAGTTCTACAGGAAGAAGCTGGCC 1583 Query 1318 CGTCGGCTCTTATTTGATCGCAGCGGTAATGACGAGCACGAAAGAAGTATACTTACAAAG 1377 ||| ||||||||||||||||||| | |||||| || || || |||||||| || |||||| Sbjct 1584 CGTAGGCTCTTATTTGATCGCAGTGCTAATGATGATCATGAGAGAAGTATCCTGACAAAG 1643 Query 1378 TTAAAAG-AACTACTCG-GG-GGGCAGTTTACTTCTAAGATGGAGGGCATGGTGACGGAT 1434 | ||| ||| | | | || || |||||||||||||||||||||||||||||||||||| Sbjct 1644 CT-CAAGCAAC-AAT-GTGGTGGACAGTTTACTTCTAAGATGGAGGGCATGGTGACGGAT 1700 Query 1435 ATAACATTGGCAAAAGAGCAGCAAACCAACTTCGCTGATTATCTAT-CAGCTAGCC-TGA 1492 | ||| |||||| ||| | |||| || |||| ||||||||| ||| || || || Sbjct 1701 TTGACACTGGCAAGAGAAAACCAAAACAGTTTCGAGGATTATCTAGGCAG-TAACCCTG- 1758 Query 1493 CCACAAAGCTGGGGATTGATTTGACTGTCACTGTTCTTACTACTGGTTTCTGGCCAAGTT 1552 | |||| | |||||||| ||||| |||||||||||||| ||||||||||||||||||| Sbjct 1759 CTGCAAACCCAGGGATTGACTTGACCGTCACTGTTCTTACCACTGGTTTCTGGCCAAGTT 1818 Query 1553 ACAAAACATCTGACCTCAATCTACCCATTGAAATGGTCAACTGTGTTGAAGCTTTTAAAA 1612 ||||| ||| |||| | |||||||||| ||||||| |||| |||||||||| | || ||| Sbjct 1819 ACAAATCATTTGACATAAATCTACCCAGTGAAATGATCAAGTGTGTTGAAG-TCTTCAAA 1877 Query 1613 CC-TTTTATGGAAC-AATAACCAAACACAGGA-GACTTTCGTGGATTTATTCTCTGGGAA 1669 ||||||| ||| || ||| |||||||||| | ||| ||||||| ||||| ||||||| Sbjct 1878 GGGTTTTATGAAACGAA-AACGAAACACAGGAAG-CTTACGTGGATCTATTCACTGGGAA 1935 Query 1670 CTTGTCACATTT-CTGGAAAATTCGATAAAAAATC-ATTGGAGTTAGTCGTTTCCACCTA 1727 |||||||||| | |||| || ||| |||| | || | ||||| | || || || || Sbjct 1936 CTTGTCACATAAACGGGAAGTTT-GATCAAAAGGCCATCG-AGTTAATAGTGTCTACTTA 1993 Query 1728 CCAGGCTGCGGTGCTTTTGCTCTTCAACA-ACGCAGAGA-GATTGAGCTACACTGAGATG 1785 ||||||||| |||||| | ||||| |||| | | || | | || || ||||||||||| Sbjct 1994 CCAGGCTGCTGTGCTTCTACTCTTTAACACAA-CTGACAAG-TTAAGTTACACTGAGATC 2051 Query 1786 TTGGAGCAGCTAAACCTTAGCCATGAAGATCTTGTCAGGCTGCTTCATTCACT-GTCATG 1844 |||| || || ||||| |||||||||||||| || ||| |||||||||| || |||||| Sbjct 2052 TTGGCTCAACTGAACCTAAGCCATGAAGATCTAGTTAGGTTGCTTCATTC-CTTGTCATG 2110 Query 1845 CGGGAAGTACAAGATTCTTATAAAGGAACCAATGTCGA-GAACCATCTCTAA-AACGGAT 1902 | ||||||||||| || | ||||| |||| | | || | |||| | || | || Sbjct 2111 TGCTAAGTACAAGATACTCCTTAAGGAGCCAAACACCAAGA-CTGTCTCCCAGAATG-AT 2168 Query 1903 ACGTTTGAATTCAACTCCAAGTTCACCGATAAGA-TGAGGAGAATTAGGGTGCCTCTGCC 1961 | ||||| ||||||||||| |||||||||| || || | ||||| | | | ||||| || Sbjct 2169 GCCTTTGAGTTCAACTCCAAATTCACCGATA-GAATGCGCAGAATCAAGATCCCTCTTCC 2227 Query 1962 TCCAATGGATGAGAGGAAGAAAGTTGTTGAAGATGTTGATAAAGATAGACGCTATGCAAT 2021 ||| | ||||| ||||||||||| ||||||||||| |||||||| ||| | |||||||| Sbjct 2228 CCCAGTTGATGAAAGGAAGAAAGTCGTTGAAGATGTCGATAAAGACAGAAGATATGCAAT 2287 Query 2022 AGATGCAGCTC-TTGTTC-GGATCATGAAGAGCAGAAAAGTGTTGGGGCATCAACAG-TT 2078 ||||| || | |||| | |||||||||||||||| ||||| ||||| |||||||| || Sbjct 2288 TGATGCTGC-CATTGT-CAGGATCATGAAGAGCAGGAAAGTATTGGGACATCAACAACTT 2345 Query 2079 AGTCTCTGAATGTGTTGAGCATCTTAGCAAAATGTTCAAGCCTGATAT-AAAGATGATAA 2137 || ||||| ||||||||||| |||||| |||||||||||||||||| |||| ||| | Sbjct 2346 -GTTTCTGAGTGTGTTGAGCAACTTAGCCGAATGTTCAAGCCTGATATCAAAGC-GATCA 2403 Query 2138 AGAAACGGATTGAGGACTTGATCAGCAGAGATTATTTGGAGAGGGATA-GCGAAAATCCC 2196 |||| || || ||||| || || | ||||||||||||||||||||| | | || ||||| Sbjct 2404 AGAAGCGTATGGAGGATTTAATAACCAGAGATTATTTGGAGAGGGACAAG-GAGAATCCT 2462 Query 2197 AACAC-TTTCAAGTA-TGTGGCTTAG 2220 |||| ||| | ||| | |||||||| Sbjct 2463 AACATGTTT-AGGTACT-TGGCTTAG 2486 > AT1G59800.1 | Symbols: | Cullin family protein | chr1:22004964-22006172 FORWARD LENGTH=768 Length=768 Score = 357 bits (193), Expect = 3e-97 Identities = 459/583 (79%), Gaps = 36/583 (6%) Strand=Plus/Plus Query 181 CAGCTTTATGATAAGTATCGTGGAGTAATTGATG-ATTA--CAATAAACAAACAGTGTTG 237 |||||||||||||||||||||| | ||||||| | |||| |||| ||||| |||||| Sbjct 172 CAGCTTTATGATAAGTATCGTGAATTAATTGA-GAATTATGCAAT--CCAAACGGTGTTG 228 Query 238 CCGGCTATAA-GGAAGAAGCATGGTGAATATATGCTGA-GAGAGCTTGTTAAGAGATGGG 295 || || ||| |||| ||||||| ||||| |||||| | ||||||||| |||||| ||| Sbjct 229 CCATCTTTAAGGGAA-AAGCATGATGAATGTATGCT-ACGAGAGCTTGCTAAGAGGTGGA 286 Query 296 CTAACCATAAAGTTCTGGTTAGA-TGGTTATCCCGCTTCTTCGACTATCTT-GACCG-TT 352 | ||||||| || |||||||| | ||| | | || | |||| || || || || Sbjct 287 ATGCCCATAAACTTTTGGTTAGATTATTTA-GCAGAAGGTTGGTCTAT-TTAGA-CGATT 343 Query 353 ACTTTGTTCCTCGGAGAAA--TCTTCTAACACTGAATAG-TGTTGGCTTGACA-TCCTTT 408 |||| || || | ||| |||| | ||||| | | |||||||||| | | ||| Sbjct 344 CCTTTCTT--TCTAAAAAAGGCCTTCCATCACTG-AGGGAAGTTGGCTTGA-ATTGCTTC 399 Query 409 CGCGACCTGGTTTATCAAGAGATACAGTCCAAT-GCCAAAGACGCTGTACTAGAACTTAT 467 ||||||| |||||||| || || |||||| || ||| ||| ||| || ||| |||||| Sbjct 400 CGCGACCAGGTTTATCGTGAAATGCAGTCC-ATGGCCGCAGAAGCTATATTAGCACTTAT 458 Query 468 TCATAAAGAACGTGAGGGTGAACAGATTGATAGATCACTAT-TGAAAAACGTAATAGATG 526 |||||||||||||||||||||||| ||||||||| ||| | ||| |||||||||||||| Sbjct 459 TCATAAAGAACGTGAGGGTGAACAAATTGATAGAGAACT-TGTGAGAAACGTAATAGATG 517 Query 527 TCTATTGTGG-GAATGGAATGGGAGAGA-TGGTAAAATACGAAGAGGATTTTGAAAG-CT 583 ||| |||| | |||||| |||||| | | |||||| ||||||||||||||||| || Sbjct 518 TCT-TTGTTGAGAATGGGATGGGA-ACTCTAAAAAAATATGAAGAGGATTTTGAAAGGCT 575 Query 584 TCTTGCTTCAAGATTCTGCATCTTACTATTCTCGCAAGGCCTCAAAGTGGAGCCAGGAGG 643 | ||||||||||| |||| |||||||||||| ||||||| |||| ||||| ||| |||| Sbjct 576 -CATGCTTCAAGATACTGCTTCTTACTATTCTAGCAAGGCATCAAGGTGGATCCAAGAGG 634 Query 644 ATTCTTGTCCTGATTACATGCGAAAGGCTGAGGAGTGTCTA-AAACTGGAGAAGGAGAGA 702 | ||||||| |||||||| || |||| || | ||||| || ||| ||||| ||||||| Sbjct 635 AGTCTTGTCTTGATTACACGCTAAAGCCTCAACAGTGTTTACAAAG-GGAGAGGGAGAGA 693 Query 703 GTCACTAACTACCTTCATTCAACCACTGAGCCGAAATTACTTG 745 |||||| ||||||||||| |||||||||| || ||| || ||| Sbjct 694 GTCACTCACTACCTTCATCCAACCACTGAACCCAAACTATTTG 736 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 110139995730 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5