BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg311427 Length=1542 Score E Sequences producing significant alignments: (Bits) Value AT1G03270.1 | Symbols: | CBS domain-containing protein with a ... 1650 0.0 AT4G14240.1 | Symbols: | CBS domain-containing protein with a ... 285 9e-76 > AT1G03270.1 | Symbols: | CBS domain-containing protein with a domain of unknown function (DUF21) | chr1:799191-802436 FORWARD LENGTH=1500 Length=1500 Score = 1650 bits (893), Expect = 0.0 Identities = 955/986 (97%), Gaps = 0/986 (0%) Strand=Plus/Plus Query 557 AGGTTCTTGATGCTGTAATTGGGCATAATGACACACTATTTAGGCGAGCTCAGCTCAAAG 616 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 515 AGGTTCTTGATGCTGTAATTGGGCATAATGACACACTATTTAGGCGAGCTCAGCTTAAAG 574 Query 617 CCCTTGTCTCAATTCACAGCCAGGAGGCTGGTAAGGGGGGTGAACTGACACACGAGGAAA 676 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 575 CCCTTGTCTCAATTCACAGCCAGGAGGCTGGTAAGGGGGGTGAACTGACACACGAGGAAA 634 Query 677 CAATGATTATAAGTGGAGCCCTGGATTTGAGCCAGAAGACTGCTGAGGAAGCTATGACGC 736 ||||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||| Sbjct 635 CAATGATTATAAGCGGAGCTCTGGATTTGAGCCAGAAGACTGCTGAGGAGGCTATGACGC 694 Query 737 CAATTGAATCAACATTTTCGCTGGATGTTAATACAAAGTTAGACTGGGAAACAATTGGAA 796 |||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||| Sbjct 695 CAATTGAATCAACATTTTCGCTGGATGTAAATACAAAGTTAGACTGGGAAACAATTGGAA 754 Query 797 AAATACTGTCACGAGGTCATAGCCGAATCCCAGTCTACTTAGGGAATTCGAAAAATATCA 856 ||||||||||||| ||||||||||||||||| ||||||||||||||| |||||||||||| Sbjct 755 AAATACTGTCACGGGGTCATAGCCGAATCCCGGTCTACTTAGGGAATCCGAAAAATATCA 814 Query 857 TTGGGCTTCTATTGGTTAAGAGTCTTCTAACTGTACGAGCAGAGACAGAGGCACCTGTAA 916 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 815 TTGGGCTTCTATTGGTTAAGAGTCTTCTAACTGTACGAGCAGAGACAGAGGCACCTGTAA 874 Query 917 GTTCTGTTTCCATCAGAAAGATCCCAAGGGTTCCATCAGACATGCCATTGTACGATATCC 976 | |||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||| Sbjct 875 GCTCTGTTTCCATCAGGAAGATCCCAAGGGTTCCATCAGACATGCCATTGTATGATATCC 934 Query 977 TCAATGAGTTTCAAAAGGGAAGCAGTCACATGGCTGCAGTTGTCAAAGTTAAAGACAGAG 1036 ||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| || Sbjct 935 TCAATGAGTTTCAAAAGGGAAGCAGTCACATGGCTGCAGTTGTCAAAGTCAAAGACAAAG 994 Query 1037 ATAAAATGAATAACATGCAGTTGCTGAGTAATGGCGAAACACCAAAAGAAAATATGAAGT 1096 |||||| ||||||||||||||| |||||||||||||||||||| |||||||||||||||| Sbjct 995 ATAAAAAGAATAACATGCAGTTACTGAGTAATGGCGAAACACCCAAAGAAAATATGAAGT 1054 Query 1097 TTTATGAGAGTAGTAATTTAACGGCTCCTTTGTTGAAGCATGAATCCCATGATGTTGTTG 1156 |||| |||||||||||||||| |||||||||||||||||||||||||||||||| |||| Sbjct 1055 TTTACCAGAGTAGTAATTTAACAGCTCCTTTGTTGAAGCATGAATCCCATGATGTAGTTG 1114 Query 1157 TTGATATTGATAAAGTACCAAAGCATGTGAAAAATAGGGGAAGAAATTTCCAACAGCACG 1216 |||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| Sbjct 1115 TTGATATTGATAAAGTACCAAAGCATGTGAAAAATAGGGGAAGAAACTTCCAACAGAACG 1174 Query 1217 GTACTGTGACAAGAGACTTACCGCGTTTGTTGGATGATAACGAGGATGCAGAAGTGATTG 1276 |||||||||| |||||||||||| |||||||||| ||||||||||||||||||||||||| Sbjct 1175 GTACTGTGACGAGAGACTTACCGTGTTTGTTGGAAGATAACGAGGATGCAGAAGTGATTG 1234 Query 1277 GCATCATCACGTTAGAGGATGTCTTTGAAGAACTTCTACAAGCAGAAATCGTGGATGAAA 1336 |||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||| Sbjct 1235 GCATCATCACCTTAGAGGATGTCTTTGAAGAACTTCTACAAGCAGAAATTGTGGATGAAA 1294 Query 1337 CTGATGTTTACATCGATGTACATAAAAGGGTACGTGTGGCGGCAGCTGCAGCAGCAGCTG 1396 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct 1295 CTGATGTTTACATCGATGTACATAAAAGGGTACGTGTGGCGGCGGCTGCAGCAGCAGCTG 1354 Query 1397 TATCATCCATAACACGTGCTTCACCAGCGGAGATTCAAAGCAAGGTAGGACAAACTGTGA 1456 ||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1355 TATCATCTATAACACGTGCTTCACCAGCGGAGATTCAAAGCAAGGTAGGACAAACGGTGA 1414 Query 1457 AGAAGCTTGTTGGGAAAGAAGCACGAGGTACAAAGAATTACACAACAAAAATCACAGAGC 1516 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1415 AGAAGCTAGTTGGGAAAGAAGCACGAGGTACAAAGAATTACACAACAAAAATCACAGAGC 1474 Query 1517 CTCTTTTAGCAGAATCAGATAGATAG 1542 |||||||||||||||||||||||||| Sbjct 1475 CTCTTTTAGCAGAATCAGATAGATAG 1500 Score = 869 bits (470), Expect = 0.0 Identities = 503/519 (97%), Gaps = 2/519 (0%) Strand=Plus/Plus Query 1 ATGGTTGTTATGAGCACTTTGGCGTTGGTAAGAGCCGCTTACTCGCTCAACAGTTTCGTC 60 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATGGTTGTTCTGAGCACTTTGGCGTTGGTAAGAGCCGCTTACTCGCTCAACAGTTTCGTC 60 Query 61 TTTGAAGCCGAAGACATCCGATTCGGTTCTCCGTGGTGGTTCGTTGTCGTCGGTGTGGCG 120 ||||||||||| |||||||||||||||||||||||||||||||| ||||||||||| ||| Sbjct 61 TTTGAAGCCGAGGACATCCGATTCGGTTCTCCGTGGTGGTTCGTCGTCGTCGGTGTCGCG 120 Query 121 TGTTTCCTCGTACTCTTCGCCGGAATAATGTCGGGACTCACGCTCGGACTGATGTCCCTT 180 ||||||||||||||||||||||||||||||||||| ||||| |||||||| ||||||||| Sbjct 121 TGTTTCCTCGTACTCTTCGCCGGAATAATGTCGGGTCTCACACTCGGACTAATGTCCCTT 180 Query 181 GGTCTCGTTGAGCTAGAGATTCTCCAACAGAGTGGTTCCTCCGCCGAGAAAAAACAGGCC 240 |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 181 GGTCTCGTTGAGCTCGAGATTCTCCAACAGAGTGGTTCCTCCGCCGAGAAAAAACAGGCC 240 Query 241 GCTGCAATCTTACCAGTGGTAAAGAAGCAGCATCAACTTCTTGTGACTCTACTTCTTTGC 300 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 241 GCTGCAATCTTACCAGTGGTAAAGAAGCAGCATCAACTTCTTGTGACTCTACTTCTTTGC 300 Query 301 AATGCAGCTGCTATGGAGGCTCTTCCTATATGCCTGGATAAGATATTCCATCCTTTTGTG 360 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 301 AATGCAGCTGCTATGGAGGCTCTTCCTATATGCCTGGATAAGATATTCCATCCTTTTGTG 360 Query 361 GCTGTTTTACTCTCAGTTACTTTTGTTCTTGCTTTTGGAGAGATCATTCCGCAAGCTATA 420 |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 361 GCTGTTTTACTCTCAGTTACTTTTGTTCTTGCTTTTGGAGAGATAATTCCGCAAGCTATA 420 Query 421 TGCTCGAGATACGGACTTGCTGTTGGCGCAAACTTTTTGTGGCTTG-TTCGCATTTTGAT 479 ||||| ||||| |||||||||||||||||||||||||||||| ||| ||||||||||||| Sbjct 421 TGCTCTAGATATGGACTTGCTGTTGGCGCAAACTTTTTGTGG-TTGGTTCGCATTTTGAT 479 Query 480 GATACTCTGCTATCCCATTGCTTACCCTATTGGAAAGGT 518 |||| |||||||||| |||||||||||||| |||||||| Sbjct 480 GATAATCTGCTATCCGATTGCTTACCCTATCGGAAAGGT 518 > AT4G14240.1 | Symbols: | CBS domain-containing protein with a domain of unknown function (DUF21) | chr4:8204347-8207408 REVERSE LENGTH=1985 Length=1985 Score = 285 bits (154), Expect = 9e-76 Identities = 348/442 (79%), Gaps = 12/442 (3%) Strand=Plus/Plus Query 593 TATTTAGGCGAGCTCAGCTCAAAGCCCTTGTCTCAATTCACAGCCAGGAGGCTGGTAAGG 652 |||||||||| |||||| | ||||| ||||| || ||||||||||| ||||||||||||| Sbjct 692 TATTTAGGCGGGCTCAGTTGAAAGCTCTTGTATCCATTCACAGCCAAGAGGCTGGTAAGG 751 Query 653 GGGGTGAACTGACACACGAGGAAACAATGATTATAAGTGGAGCCCTGGATTTGAGC-CAG 711 | ||||| || ||||| || || || | || || |||||||| || ||||||| | || Sbjct 752 GAGGTGAGCTTACACATGATGAGACGACAATCATTAGTGGAGCTCTTGATTTGA-CTGAG 810 Query 712 AAGACTGCTGAGGAAGCTATGACGCCAATTGAATCAACATTTTCGC-TGGATGTTAATAC 770 |||||||| | ||||| ||||| |||||||| || || || || | ||||||| ||| | Sbjct 811 AAGACTGCACAAGAAGCCATGACACCAATTGAGTCTACCTTCTC-CTTGGATGTAAATTC 869 Query 771 AAAGTTAGACTGGGAAACAATTGGAAAAATACTGTCACGAGGTCATAGCCGAATCCCAGT 830 ||| || || |||||| | || || || || ||| ||||||| |||||||| | || || Sbjct 870 AAAATTGGATTGGGAAGCTATGGGGAAGATTCTGGCACGAGGCCATAGCCGCGTTCCTGT 929 Query 831 CTACT-TAGGGAATTCGAAAAATATCATTGGGCTTCTATTGGTTAAGAGTCTTCTAACTG 889 ||||| | |||||| ||||||| | || || ||||| ||||| ||||||||||| || | Sbjct 930 CTACTCT-GGGAATCCGAAAAACGTTATCGGACTTCTCTTGGTGAAGAGTCTTCTTACAG 988 Query 890 TACGAGCAGAGACAGAGGCACC-TGTAAGTTCTGTTTCCATCA-GAAAGATCCCAAGGGT 947 | || | || |||||| | || ||| || | |||| || | | ||| |||||||| Sbjct 989 TTCGCCCTGAAACAGAGAC-CCTTGTCAGCGCAGTTTGTAT-ACGCCGGATTCCAAGGGT 1046 Query 948 TCCATCAGACATGCCAT-TGTACGATATCCTCAATGAGTTTCAAAAGGGAAGCAGTCACA 1006 |||| | || ||||| | | || ||||| || |||||||||||||||||||||||||||| Sbjct 1047 TCCAGCTGATATGCC-TCTCTATGATATACTGAATGAGTTTCAAAAGGGAAGCAGTCACA 1105 Query 1007 TGGCTGCAGTTGTCAAAGTTAA 1028 ||||||||||||| || ||||| Sbjct 1106 TGGCTGCAGTTGTGAAGGTTAA 1127 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 76104026220 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5