BLASTN 2.2.26+


Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.



Database: TAIR10_cdna_20110103_representative_gene_model_updated
           33,602 sequences; 51,074,197 total letters



Query= Ahg311459

Length=477
                                                                      Score     E
Sequences producing significant alignments:                          (Bits)  Value

  AT1G03650.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) sup...   688    0.0  


> AT1G03650.1 | Symbols:  | Acyl-CoA N-acyltransferases (NAT) superfamily 
protein | chr1:910023-911193 REVERSE LENGTH=793
Length=793

 Score =  688 bits (372),  Expect = 0.0
 Identities = 443/478 (93%), Gaps = 2/478 (0%)
 Strand=Plus/Plus

Query  1    ATGGA-AAAGGGAATTGTAGTAGAACTGATTAGAGGGTCGACCAATTTGACCAAAGTTGT  59
            ||||| ||| ||| |||| ||||| ||||||||||||||||||| || | ||||||||||
Sbjct  91   ATGGACAAA-GGAGTTGTGGTAGAGCTGATTAGAGGGTCGACCAGTTGGGCCAAAGTTGT  149

Query  60   GGAAGATATCGTGAAGCTGGAGAAGAAAACGTTCCCTAAACACGAATCTCTCGCTCAAAA  119
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct  150  GGAAGATATCGTGAAGCTGGAGAAGAAAACGTTCCCTAAACACGAATCTCTCGCTCAAAC  209

Query  120  TTTCGACGCAGAGCTGCGCAAGAGAAACGCCGGTTTGCTATATGTGGAAGCCGACGGAGA  179
            |||||| ||||||||||| |||| |||||||||||||||||| ||||| || || |||||
Sbjct  210  TTTCGATGCAGAGCTGCGTAAGAAAAACGCCGGTTTGCTATACGTGGATGCTGAAGGAGA  269

Query  180  AACAGTGGGCTATGTTATGTATTCTTGGCCATCTTCACTTTCCGCTTCCATCACCAAGCT  239
             ||||| |||||||  |||||||||||||||||||| ||||||||||| |||||||||||
Sbjct  270  CACAGTAGGCTATGCCATGTATTCTTGGCCATCTTCGCTTTCCGCTTCAATCACCAAGCT  329

Query  240  CGCAGTGAAGGAGAATTGGAGGAGACAAGGTCATGGAGAAGCATTGTTGAGAGCGGCTAT  299
            |||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct  330  CGCAGTGAAGGAGAATTGCAGAAGACAAGGTCATGGAGAAGCATTGTTGAGAGCGGCTAT  389

Query  300  CGAAAAGTGCAGAAGCAGGAAGGTGCAGCGGGTTTCACTTCATGTCGACCCCACGAGAAC  359
            ||| |||||||||||||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct  390  CGACAAGTGCAGAAGCAGAAAGGTGCAACGGGTTTCACTTCATGTCGACCCCACGAGAAC  449

Query  360  TTCTGCGGTGAATCTGTACAAAAAACTTGGGTTCCAAGTAGACTGTCTGGTTAAAGGCTA  419
            |||||||||||||||||||||||| ||||||||||||||||||||||| || ||| ||||
Sbjct  450  TTCTGCGGTGAATCTGTACAAAAAGCTTGGGTTCCAAGTAGACTGTCTAGTGAAAAGCTA  509

Query  420  CTACTCTACCGATAGAGATGCTTACAGAATGTACCTAGATTTTGATGACTCCATTTAG  477
            ||||||  | ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct  510  CTACTCGGCTGATAGAGATGCTTACAGAATGTACCTAGATTTTGATGACTCTATTTAG  567



Lambda     K      H
    1.33    0.621     1.12 

Gapped
Lambda     K      H
    1.28    0.460    0.850 

Effective search space used: 22705834444


  Database: TAIR10_cdna_20110103_representative_gene_model_updated
    Posted date:  Sep 25, 2014  6:13 PM
  Number of letters in database: 51,074,197
  Number of sequences in database:  33,602



Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5