BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg311525 Length=2937 Score E Sequences producing significant alignments: (Bits) Value AT1G04390.1 | Symbols: | BTB/POZ domain-containing protein | c... 1341 0.0 > AT1G04390.1 | Symbols: | BTB/POZ domain-containing protein | chr1:1179363-1183704 REVERSE LENGTH=2954 Length=2954 Score = 1341 bits (726), Expect = 0.0 Identities = 815/858 (95%), Gaps = 6/858 (1%) Strand=Plus/Plus Query 1 ATGGCATCGTCAAAGGGAGGAAACACCACCGCCCACATCAATACTCTTCACCATCGTCTT 60 ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| Sbjct 90 ATGGCGTCGTCAAAGGGAGGAAACACCACTGCCCACATCAATACTCTTCACCACCGTCTT 149 Query 61 TATCACGCTCTCAATCTTGGCTTCAGGGTATGTGATGAGAAAGAGAAGAAGTGGAAGTGT 120 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 150 TATCACGCTCTCAATCTTGGCTTCAGGGTTTGTGATGAGAAAGAGAAGAAGTGGAAGTGT 209 Query 121 ACTGATATCGAGATACAGAGACATGTCGTGAAGTCGATTTCAGCTTTTCTTGATTGTTTT 180 |||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 210 ACTGATATTGAGATACAGAGACATGTCGTGAAGTCGATTTCAGCTTTCCTTGATTGTTTT 269 Query 181 TCTCGAGCAACAGCTAACAATCGTCTTATCAAGGATTCAATTTCTGATATAGCCGGGGCC 240 ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 270 TCTCGTGCAACAGCTAACAATCGTCTTATCAAGGATTCAATTTCTGATATAGCCGGGGCT 329 Query 241 TTGGTGTTTATTCTAGGGTGTAAAAACAGAGCAGTGGTTGGTTTAGCAGCCAATGTAGTT 300 |||||||||||||||||| ||||||||||||||||||||||||| ||||||||||||||| Sbjct 330 TTGGTGTTTATTCTAGGGAGTAAAAACAGAGCAGTGGTTGGTTTGGCAGCCAATGTAGTT 389 Query 301 ATTAGGTTGATCCGTATTGTTCCTCCTTCTATTTTGCATTCATATTCTTTGGATCTCGTG 360 ||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 390 ATTAGGTTGATTCGTATTGTTCCTCCTTCTATCTTGCATTCATATTCTTTGGATCTCGTG 449 Query 361 GAGTCTTTATCACCTTTGTTAAGTTGTCAACAATTCGATGTTTCGCTTCCCTGTGCCGTT 420 ||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| Sbjct 450 GAGTCTTTATCACCTCTGTTATGTTGTCAACAATTCGATGTTTCGCTTCCCTGTGCCGTT 509 Query 421 GCTTTGAACGCTATTCTTGTAAACGTAAGAGAAACGAAGGAGAAAGATGTGTGGAAGATT 480 |||||||||||||||||||| ||||| |||||||| ||||| ||||| |||||||||||| Sbjct 510 GCTTTGAACGCTATTCTTGTGAACGTGAGAGAAACTAAGGAAAAAGAAGTGTGGAAGATT 569 Query 481 TTAGAAGACGCA-AAAACTGTGGTTTCCGTTGTTGGTAATCTGCAGAAT-TTTT-TGGAG 537 ||||| || | | |||||||||||||| |||||||||||| ||||| || |||| | ||| Sbjct 570 TTAGAGGATG-AGAAAACTGTGGTTTCTGTTGTTGGTAATTTGCAG-ATCTTTTCT-GAG 626 Query 538 GGGAGTATGTCAGTGGAATGGTTTCAAGAGATGGCTTTGCTTCTGAGTACAATTATGTTG 597 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 627 GGGAGTATGTCAGTGGAATGGTTTCAAGAGATGGCTTTGCTTCTGAGTACAATTATGTTG 686 Query 598 AAGTGGCCTCGGTCAAGGTATTCTGTTTGGCACAACCCTGCCTTGATGGGTATATTGGAG 657 |||||||||| ||| ||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 687 AAGTGGCCTCAGTCTAGGTATTCTGTTTGGAACAACCCTGCCTTGATGGGTGTATTGGAG 746 Query 658 AGTGTTAGTCAGAAGCCTGATATGGGTTTGAGAGTTGCAACTTTGAAGCTGTATTCTTCT 717 ||||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 747 AGTGTTAGTCAGAAGCCTGATATGGGTTTGACAGTTGCAACTTTGAAGCTCTATTCTTCT 806 Query 718 CTAGCTCTGTGTGGACATGGTGCCAATGCGCTTCTAGACAATGGGAAGCCTATGTTAGAT 777 |||||||| ||||| ||||||||||||| |||| |||||||||||||||||||||||||| Sbjct 807 CTAGCTCTTTGTGGCCATGGTGCCAATGAGCTTTTAGACAATGGGAAGCCTATGTTAGAT 866 Query 778 ATGATGATTAGCTGCATGGGGGAATCAAGCTCTCAAACTGCTCGAATTGAAGGGTTAAAG 837 ||||||||||||||||||| ||| ||||||||||||| |||||||||||||||||||||| Sbjct 867 ATGATGATTAGCTGCATGGAGGAGTCAAGCTCTCAAAATGCTCGAATTGAAGGGTTAAAG 926 Query 838 CTAGCGCAAAGGCTTGCG 855 ||||| |||||||||||| Sbjct 927 CTAGCACAAAGGCTTGCG 944 Score = 1243 bits (673), Expect = 0.0 Identities = 771/819 (94%), Gaps = 4/819 (0%) Strand=Plus/Plus Query 1601 GCTGGTATCAAAGGAATTGGAAAAATATTGGAGCATCAAGTTTTGCTCCTTCTCCCCAGA 1660 |||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||| Sbjct 1288 GCTGGTATCAAAGGAATTGGGAAAATATTGGAGCATCAAGTTTTGCTCCTTCTTCCCAGA 1347 Query 1661 GCACCTCTGAAAAGAGGATATGTTGTTGGGTATGTACGGAAGACTGGGACAACAAAGATG 1720 ||| | |||||||||||||||| || |||||||||||||||||||||||||||||||||| Sbjct 1348 GCATCACTGAAAAGAGGATATGCTGCTGGGTATGTACGGAAGACTGGGACAACAAAGATG 1407 Query 1721 CTTTTCTTCTATACTCTCTGTTGGCTTTGGCTGAGTTGGTAAATCATTCATTCTCTGAAC 1780 | |||||||||||| |||| ||||||||||| |||||||||||||||||||||| || || Sbjct 1408 CCTTTCTTCTATACGCTCTCTTGGCTTTGGCCGAGTTGGTAAATCATTCATTCTTTGGAC 1467 Query 1781 AGAATCACGCT-ATAGAACTTTCAGTGAAGAGCGAAAATTTGAAAGATCGGTTATGCACC 1839 ||||||||||| | |||||||||| ||||||||| ||||||||||||||||||||||||| Sbjct 1468 AGAATCACGCTGA-AGAACTTTCAATGAAGAGCGGAAATTTGAAAGATCGGTTATGCACC 1526 Query 1840 ACACTTAAGGAGATCCGAGATGAAACTTATGGCTCTGGTCCAAGGTGGTATGCTGCACAC 1899 ||||||||||| ||||| |||| ||| ||||||||||||||||||||||||||||||||| Sbjct 1527 ACACTTAAGGAAATCCGCGATGGAACATATGGCTCTGGTCCAAGGTGGTATGCTGCACAC 1586 Query 1900 ATCCTAAGCTATCTTGGATACTATGGCTTCCAACATAAGTTGGGGAAAAGGCTCATGGGA 1959 |||||||||||| |||||||||| |||||| |||||||||||||||||||||||||| | Sbjct 1587 ATCCTAAGCTATTTTGGATACTACGGCTTCGAACATAAGTTGGGGAAAAGGCTCATGTGT 1646 Query 1960 GCTTATGAAGATGAGGAATTTAGTGATATGCGACTCGTTTTTGCTAGTGGGAATAGTGCG 2019 ||||||||||||||||||| |||||||||||||||| ||||||||||||| ||||||||| Sbjct 1647 GCTTATGAAGATGAGGAATATAGTGATATGCGACTCCTTTTTGCTAGTGGAAATAGTGCG 1706 Query 2020 AGTGTAAACAAAGTTATTATTG-GTGTCAGTTGTCCAATGTTGCTGCCTCCCAAGGAAGG 2078 |||||||||||||||||||| | | ||||| ||||||||| | ||||||||||||||||| Sbjct 1707 AGTGTAAACAAAGTTATTATCGCG-GTCAGGTGTCCAATGCTACTGCCTCCCAAGGAAGG 1765 Query 2079 AGCTCACAGTGGCTCGACTATATTAACTGAGAAATCTCAGAGAACCGTTCAAGAAATCCG 2138 |||||||||| |||| ||||||| |||||||||||||||||||||||||||||||||||| Sbjct 1766 AGCTCACAGTAGCTCAACTATATCAACTGAGAAATCTCAGAGAACCGTTCAAGAAATCCG 1825 Query 2139 CATGTCTGCCAATGTGGATACTTTGGCGCTTGTTAAATTATTGGAATTTGCTTACTCCGG 2198 |||||||||||||||||||| |||||| ||||||||||||||||||||||||||||| || Sbjct 1826 CATGTCTGCCAATGTGGATATTTTGGCACTTGTTAAATTATTGGAATTTGCTTACTCTGG 1885 Query 2199 GTATGTGGAAGTAGAAAGCACGACTCTGAAAAAGCTGAAAACTTTGGCGAGACATTGTAA 2258 ||||||||||||||||||||||| ||||||||||||||| ||||||||| ||||||||| Sbjct 1886 TTATGTGGAAGTAGAAAGCACGACACTGAAAAAGCTGAAACCTTTGGCGAAACATTGTAA 1945 Query 2259 GGCAAAGGTTCTGCTGCAGATGCTCAGCAGAAGAAGACCCAAGTGGGGATCTTCAATACC 2318 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1946 GGCAAAGGTTCTGCTGCAGATGCTCTGCAGAAGAAGACCCAAGTGGGGATCTTCAATACC 2005 Query 2319 CGTAATTGATTTACCCCTTGCCCTCACTCCTAAACTCATCCACTTCTCGGATGTGATATT 2378 || ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2006 CGAAATTGATATACCCCTTGCCCTCACTCCTAAACTCATCCACTTCTCGGATGTGATATT 2065 Query 2379 AGTACCTAAAGAAACAAACGTGGCTGGCTTCAACTGCCG 2417 ||||||||||||||||||||||||| ||||||||||||| Sbjct 2066 AGTACCTAAAGAAACAAACGTGGCTTGCTTCAACTGCCG 2104 Score = 769 bits (416), Expect = 0.0 Identities = 444/457 (97%), Gaps = 3/457 (1%) Strand=Plus/Plus Query 2484 CCATTTGGATAGACTAAACGTTCCTGTGAGCTGGCTGGGGTTAACAAAACTTGTGAGTTG 2543 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2207 CCATTTGGATAGACTAAACGTTCCTGTGAGCTGGCTGGGGTTAACAAAACTTGTGAGTTG 2266 Query 2544 GTTCTACTCTGATGAGTTGCCAAACCCTCCATCGGGTTGCAAGTGGAACAACATGGACAC 2603 |||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||| Sbjct 2267 GTTCTACTCTGATGAGTTGCCAAAGCCTCCATCGGGTTGCAAGTGGAACAACATGGACAC 2326 Query 2604 TGAGGCAAAACTGGATGAGCTTCAAGCTTATGTGGAGATATACTCGCTTTCTGAATGGTG 2663 ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2327 TGAGGCAAAGCTGGATGAGCTTCAAGCTTATGTGGAGATATACTCGCTTTCTGAATGGTG 2386 Query 2664 GATTATGGAAGATCTTCAAAACGATTGCGCTCATGTGATTCTCTGTTGCTTGGAATCCGC 2723 |||||||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 2387 GATTATGGAAGAACTTCAAAACGATTGCGCTCATGTGATTCTCTCTTGCTTGGAATCCGC 2446 Query 2724 TAGAGAGTTATCTATCAAAACAATTGAATTAGCTGCAAGTTTCTCGATGTGGAAACTGGT 2783 |||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||| Sbjct 2447 TAGAGAGTTATCTATCAAAACAATCGAATTAGCTGCGAGTTTCTCGATGTGGAAACTGGT 2506 Query 2784 GGAAGCTGCTGCTAATCATGCAGCTCCTATATATCATCAGCTTCGTGACTCGGGTGAGCT 2843 |||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||| Sbjct 2507 GGAAGCTGCTGCTAATCATGCAGCTCCTATTTATCATCAGCTTCGTGACTCAGGTGAGCT 2566 Query 2844 CGATGAGCTAGACGACGAGCTGGTAAACTTGATCCGAACCGCCGCTGTTCAGTTCTCTCA 2903 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 2567 CGATGAGCTAGACGACGAGCTGGTAAACTTGATCCGAACCGCCGCTGTTCAGTTTTCTCA 2626 Query 2904 ACAGGGTGGTTAAAT---CAACAGAAGCAAAAGCTAA 2937 ||||||||||||||| ||||||||||||||| ||| Sbjct 2627 ACAGGGTGGTTAAATTATCAACAGAAGCAAAAGTTAA 2663 Score = 412 bits (223), Expect = 7e-114 Identities = 237/244 (97%), Gaps = 0/244 (0%) Strand=Plus/Plus Query 912 GGCTACCATTCAGACCATGGGTAAGTGGTTTTTGAGCTCAGGAAAGCTTGAACATGACCA 971 ||||||| ||| |||||||||||||||||| |||||||||||||||||||||| |||||| Sbjct 944 GGCTACCGTTCGGACCATGGGTAAGTGGTTCTTGAGCTCAGGAAAGCTTGAACTTGACCA 1003 Query 972 GATGTCTTTGCTTGTGGAGGCTTGTAAACTGGCTCTAATCACTCGTTGGGAAGGAAAACA 1031 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1004 GATGTCTTTGCTTGTGGAGGCTTGTAAACTGGCTCTAATCACTCGTTGGGAAGGACAACA 1063 Query 1032 TCATATTTATTTCTGGAAGTATCGGATCTCTGAAGCGCTTCTTAGTCTTGTTGTGGAGAA 1091 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1064 TCATATTTATTTCTGGAAGTATCGGATCTCTGAAGCGCTTCTTAGTCTTGTTGTGGAGAA 1123 Query 1092 CTTTCATAGTCAATCCTTGGATGGTTATGTGTCTCTGGAAGAAGAAATTTTAGTTGCTGA 1151 |||||||||||||||||||||||||||||| ||||||||||||||| ||||||||||||| Sbjct 1124 CTTTCATAGTCAATCCTTGGATGGTTATGTATCTCTGGAAGAAGAAGTTTTAGTTGCTGA 1183 Query 1152 GAAG 1155 |||| Sbjct 1184 GAAG 1187 Score = 174 bits (94), Expect = 4e-42 Identities = 100/103 (97%), Gaps = 0/103 (0%) Strand=Plus/Plus Query 1369 AGCGAGTCAGCATCAAGAGCAGTGCTAATGATGATATATTCTCCCTCCAAATACATATCA 1428 ||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| Sbjct 1186 AGCGAGTCAGCATCAAGAGCAGTGCTAATGATGATATGTTCTCCCTCCAAATACATATCA 1245 Query 1429 TCGAGGGCCAGAGTTACCCTGTCATTCATCCTAGAAGAAGGTG 1471 ||||||||| |||||||||||||||| |||||||||||||||| Sbjct 1246 TCGAGGGCCCGAGTTACCCTGTCATTTATCCTAGAAGAAGGTG 1288 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 145985804130 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5