BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg311665
Length=3621
Score E
Sequences producing significant alignments: (Bits) Value
AT1G05830.1 | Symbols: ATX2, SDG30 | trithorax-like protein 2 |... 1777 0.0
AT2G31650.1 | Symbols: ATX1, SDG27 | homologue of trithorax | c... 972 0.0
AT1G05835.1 | Symbols: | PHD finger protein | chr1:1762224-176... 654 0.0
> AT1G05830.1 | Symbols: ATX2, SDG30 | trithorax-like protein 2
| chr1:1754244-1761817 FORWARD LENGTH=3807
Length=3807
Score = 1777 bits (962), Expect = 0.0
Identities = 1083/1139 (95%), Gaps = 17/1139 (1%)
Strand=Plus/Plus
Query 1110 GTACCTAAAAGAATATAAGCTTCCAGGAAGGATGGATCAACTTCAAAAAGTTGCTGATAC 1169
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1414 GTACCTAAAAGAATATAAGCTTCCAGGAAGGATGGATCAACTTCAGAAAGTTGCTGATAC 1473
Query 1170 TGATTGTTCGGAAAGGACTAATAGTGGAGAAGAGGACAGCTCAAACTCGGGTGATGATTA 1229
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1474 TGATTGTTCGGAAAGGATTAATAGTGGAGAAGAGGACAGCTCAAACTCGGGTGATGATTA 1533
Query 1230 CACAAAAGATGGAGAAGTCTGGTTGCAACCAACAGGAA-TTGGAGATTGCTTGCATAGAA 1288
|||||||||||||||||||||||||| |||||| ||| |||||||||||||||||||||
Sbjct 1534 CACAAAAGATGGAGAAGTCTGGTTGCGGCCAACA-GAACTTGGAGATTGCTTGCATAGAA 1592
Query 1289 TAGGCGATCTGCAAATAATGAACCTTGGAAGGATCGTGACAGACTCAGAATTTTTCAAGG 1348
||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||
Sbjct 1593 TAGGCGATCTGCAAATAATTAATCTTGGAAGGATCGTGACAGACTCAGAATTTTTCAAGG 1652
Query 1349 ATAGTAAGCATACTTGGCCTGAAGGGTATACAGCTATAAGAAAATTTATATCACTAAAAG 1408
|||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||
Sbjct 1653 ATAGTAAGCATACTTGGCCTGAAGGGTATACAGCTACAAGAAAATTCATATCACTAAAAG 1712
Query 1409 ATCCTGATGCATCTGCCATGTACAAGATGGAAGTGCTTAGAGATGCCGAGTCAAAAAATC 1468
||||| ||||||||||||||||||||||||||||||||||||||||||||||||| | ||
Sbjct 1713 ATCCTAATGCATCTGCCATGTACAAGATGGAAGTGCTTAGAGATGCCGAGTCAAAGACTC 1772
Query 1469 GCCCTGTTTTCAGAGTTACAACCAACAGCGGTGAGCAGTTCAAAGGGGACACTCCATCTG 1528
|||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||
Sbjct 1773 GCCCTGTTTTCAGAGTGACGACCAATAGCGGTGAGCAGTTCAAAGGGGACACTCCATCTG 1832
Query 1529 CCTGCTGGAATAAAATATATAATAGGATAAAAAAGATTCAGAGTGCTTCTGATGGTCCTG 1588
|||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||
Sbjct 1833 CCTGCTGGAATAAAATATATAATAGGATAAAAAAGATTCAGATTGCTTCTGATAATCCTG 1892
Query 1589 ATGGTTTGGGTGAAGGACTTCATGAATCTGGTACAGATATGTTTGGCTTCTCCAACCCAG 1648
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1893 ATGTTTTGGGTGAAGGACTTCATGAATCTGGTACAGATATGTTTGGCTTCTCCAACCCAG 1952
Query 1649 AAGTCGATAAACTTATTCAGGGGCTATTACAATCTAGACCACCTTCCAAGGTTTCTCAGC 1708
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct 1953 AAGTCGATAAACTTATTCAGGGGCTATTACAATCCAGACCACCTTCCAAGGTTTCTCAGC 2012
Query 1709 GCAAATATAGTTCCGGAAAGTATCAAGATCATCCTACTGGTTACCGACCTGTACGGGTGG 1768
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2013 GCAAATATAGTTCGGGAAAGTATCAAGATCATCCTACTGGTTACCGACCTGTACGGGTGG 2072
Query 1769 ACTGGAAAGATCTTGATAAGTGCAATGTCTGCCACATGGATGAGGAATATGAGAACAATT 1828
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2073 AGTGGAAAGATCTTGATAAGTGCAATGTCTGCCACATGGATGAGGAATATGAGAACAATT 2132
Query 1829 TGTTCTTGCAATGTGATAAATGTAGAATGATGGTCCATACTAGATGCTATGGGCAGCTAG 1888
||||| |||||||||||||||||||||||||||||||||||||||||||||| ||||| |
Sbjct 2133 TGTTCCTGCAATGTGATAAATGTAGAATGATGGTCCATACTAGATGCTATGGCCAGCTGG 2192
Query 1889 AACCCCGTGATGGCATTCTGTGGTTATGCAACTTATGTCGTCCTGGCGCTCTTGATATTC 1948
|||||| | |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 2193 AACCCCATAATGGCATTCTGTGGTTATGCAACTTATGTCGTCCTGTCGCTCTTGATATTC 2252
Query 1949 CTCCTCGATGTTGTCTTTGTCCTGTACCAACAAAATATCTTTCAGGGGGCGCTATGAAGC 2008
|||||||||||||||||||||||||| || ||||||||||||||||
Sbjct 2253 CTCCTCGATGTTGTCTTTGTCCTGTAG--------TA-------GGGGGCGCTATGAAGC 2297
Query 2009 CGACAACTGATGGGCGCTGGGCTCATCTGGCGTGTGCCATATGGATCCCAGAAACCTGCT 2068
||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct 2298 CGACAACTGATGGGCGCTGGGCTCATCTGGCTTGTGCCATATGGATCCCAGAAACATGCT 2357
Query 2069 TATTGGATGTCAAGAAGATGGAACCGATCGATGGAGTTAATAAAGTCAATAAGGATCGTT 2128
|||||||||||||||||||||||||||||||||| ||||| ||||||| |||||||||||
Sbjct 2358 TATTGGATGTCAAGAAGATGGAACCGATCGATGGGGTTAAGAAAGTCAGTAAGGATCGTT 2417
Query 2129 GGAAATTGTTGTGCAGCATCTGTGGTGTATCTTATGGAGCTTGTATCCAATGTTCAAATA 2188
||||| | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2418 GGAAACTATTGTGCAGCATCTGTGGTGTATCTTATGGAGCTTGTATCCAATGTTCAAATA 2477
Query 2189 GTTCTTGTCGAGTGGCATATCATCCACTATGTGCACGTGCTGCTGGTCTCTGTGTTGAG 2247
| |||||||||||||||||||||| ||||||||||| |||||||||||||||||||||
Sbjct 2478 ATACTTGTCGAGTGGCATATCATCCGCTATGTGCACGAGCTGCTGGTCTCTGTGTTGAG 2536
Score = 1498 bits (811), Expect = 0.0
Identities = 867/895 (97%), Gaps = 0/895 (0%)
Strand=Plus/Plus
Query 2299 CTTGCAGATGAGGATAGGCTTTTTCTTCTATCAATGGATGACGATGAAGCAGATCAGTGC 2358
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2537 CTTGCAGATGAGGATAGGCTTTTTCTTCTATCAATGGATGACGATGAAGCAGATCAGTGC 2596
Query 2359 ATCCGCCTGCTTTCATTTTGCAAGAGGCATCGACAAACATCAAATGACCACTTAGAAACA 2418
|||||||||||||||||||||||||||||||||||||| |||||| ||||| ||||||||
Sbjct 2597 ATCCGCCTGCTTTCATTTTGCAAGAGGCATCGACAAACGTCAAATTACCACCTAGAAACA 2656
Query 2419 GAGTACATGATCAAACCAGCTCATAATATTGCCGAGTATCTCCCACCTCCTAATCCATCT 2478
||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2657 GAGTACATGATCAAACCTGCTCACAATATTGCCGAGTATCTCCCACCTCCTAATCCATCT 2716
Query 2479 GGCTGTGCTCGCACTGAGCCATATAATTATCTTGGAAGAAGAGGACGAAAGGAACCTGAA 2538
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2717 GGCTGTGCTCGCACTGAGCCATATAATTATCTTGGAAGAAGAGGACGAAAGGAACCTGAA 2776
Query 2539 GCTCTTGCTGGTGCTTCTTCAAAACGATTATTTGTTGAGAATCAGCCGTACATTGTTGGT 2598
||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||||||
Sbjct 2777 GCTCTTGCTGGTGCTTCTTCAAAGCGATTATTTGTTGAGAATCAACCGTATATTGTTGGC 2836
Query 2599 GGATACTCTCGACATGAATTTTCAACCTACGAACGCATTTATGGATCAAAGATGTCACAA 2658
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 2837 GGATACTCTCGACATGAATTTTCAACCTACGAACGCATTTATGGATCAAAGATGTCCCAA 2896
Query 2659 ATAATTACTCCAAGCAATATTCTATCTATGGCTGAGAAATATACATTCATGAAGGAAACG 2718
|||| |||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 2897 ATAACTACTCCGAGCAATATTCTATCTATGGCCGAGAAATATACATTCATGAAGGAAACC 2956
Query 2719 TACAGGAAGAGATTAGCATTTGGGAAATCGGGAATTCATGGTTTTGGGATCTTTGCAAAG 2778
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2957 TACAGGAAGAGATTAGCATTCGGGAAATCGGGAATTCATGGTTTTGGGATCTTTGCAAAG 3016
Query 2779 CTTCCGCACAGGGCGGGAGATATGATGATTGAGTACACTGGTGAACTTGTTAGGCCACCA 2838
||||||||||| || ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 3017 CTTCCGCACAGAGCCGGAGATATGGTGATTGAGTACACTGGTGAACTTGTTAGGCCACCA 3076
Query 2839 ATAGCTGACAAGAGAGAGCATCTTATATACAACTCAATGGTGGGTGCTGGGACCTATATG 2898
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct 3077 ATAGCTGACAAGAGAGAGCATCTTATATACAACTCAATGGTGGGTGCCGGGACCTATATG 3136
Query 2899 TTTAGAATTGATAATGAGCGAGTCATAGACGCAACAAGGACAGGCAGCATTGCCCACCTC 2958
|||||||||||||||||||| ||||||||||||||||||||||| |||||||| |||||
Sbjct 3137 TTTAGAATTGATAATGAGCGGGTCATAGACGCAACAAGGACAGGAAGCATTGCTCACCTT 3196
Query 2959 ATCAATCACTCATGTGAGCCAAATTGCTATTCAAGAGTCATTAGTGTTAATGGTGATGAG 3018
|||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 3197 ATCAATCATTCATGTGAGCCAAATTGCTATTCAAGAGTCATCAGTGTTAATGGTGATGAG 3256
Query 3019 CATATTATCATATTTGCAAAGAGAGATGTTGCAAAATGGGAGGAGCTGACCTATGACTAT 3078
||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 3257 CATATTATCATATTTGCAAAGAGAGATGTCGCAAAATGGGAGGAGCTGACCTATGATTAT 3316
Query 3079 AGGTTCTTTTCAATTGATGAGCGCCTTGCATGTTACTGTGGTTTCCCAAGATGCCGGGGT 3138
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3317 AGGTTCTTTTCAATTGATGAGCGCCTTGCATGTTACTGTGGTTTCCCAAGATGCCGGGGT 3376
Query 3139 GTTGTTAATGACACAGAAGCCGAAGAACAACAGGCAAATATTCATGCTTCTCGCT 3193
|||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 3377 GTTGTTAATGACACAGAAGCCGAAGAACGACAGGCAAATATTCATGCTTCTCGCT 3431
Score = 1411 bits (764), Expect = 0.0
Identities = 1012/1123 (90%), Gaps = 52/1123 (5%)
Strand=Plus/Plus
Query 1 ATGTCGTGTGTCCCAAAACCTTTGGAGGAAGAAGAAGAAGATATCCAAATCAAAACCGAA 60
|||||||||||||||||| || ||||||| |||||||| ||||||||||||||||
Sbjct 218 ATGTCGTGTGTCCCAAAA------GAAGAAGAAGGAGAAGATACCCAAATCAAAACCGAA 271
Query 61 CTCCATGACCACG--G-TGATATTCCTGTTCGTTACGCCTCTCTTGAGAGCGTCTACTCC 117
||||| ||||||| | ||||| |||||||||||||||||||||||||||||| ||||||
Sbjct 272 CTCCACGACCACGCTGCTGATAATCCTGTTCGTTACGCCTCTCTTGAGAGCGTTTACTCC 331
Query 118 GTTTCTTCTTCCTCCTCTTCGTTGTGTTGTATTAGCGCCGCTGGTTCACACAAGAAGGTC 177
||||| |||||||| ||||| |||||||| | | |||||||||||| ||||||||||||
Sbjct 332 GTTTCCTCTTCCTCGTCTTCATTGTGTTGCAAGACCGCCGCTGGTTCCCACAAGAAGGTC 391
Query 178 AATGCCCAGAAGAACCCAATGACCGATAGTTTTGAGTTGCAGCCTCATCGGCGACCGGAG 237
||||||| ||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 392 AATGCCCTCAAGCTCCCAATGAGCGATAGTTTTGAGTTGCAGCCTCATCGGCGACCGGAG 451
Query 238 ATTGTTCACGTCTATTGTCGCCGTAAGAGGAGGCGGCGGCGGCGGAGGGAGTCTTTCGTT 297
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||
Sbjct 452 ATTGTTCACGTCTATTGTCGCCGTAAGAGGAGGAGGCGGCGGCGGAGGGAGTCTTTCCTT 511
Query 298 GAGCTAGCATTACTTCAGAATGA--GA---GA-A-AG--GATGGGATTGTAAAAATTGAA 348
||| ||||| ||||||||||||| || || | || ||| ||||||| |||||||||
Sbjct 512 GAGTTAGCAATACTTCAGAATGAGGGAGTGGAGAGAGATGATCGGATTGTGAAAATTGAA 571
Query 349 AATGCGGAGCTTGATga-g-g-aggaggaggaggagaagaagaagaagcacaagaaaagg 405
| ||||||||||||||| | | ||||||||||| | |||||||||||||| |||||||||
Sbjct 572 AGTGCGGAGCTTGATGATGAGAAGGAGGAGGAGAATAAGAAGAAGAAGCAGAAGAAAAGG 631
Query 406 aggaTTGGTAATGGCGAGCTCATGAAATTGGGTGTGGATTCCACTACTTTAAGCGTCTCT 465
||||||||||||||||||||||||||| |||| |||||||| ||||||||||||||||||
Sbjct 632 AGGATTGGTAATGGCGAGCTCATGAAACTGGGCGTGGATTCGACTACTTTAAGCGTCTCT 691
Query 466 GCTTCCCCGCCTTTACGGGGATGTCGAATTAAAGCTGTGTGTAGCGGAAATAAACAAGAT 525
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 692 GCTACCCCGCCTTTACGGGGATGTCGAATTAAAGCTGTGTGTAGCGGAAATAAACAAGAT 751
Query 526 GGATCTTCCCGGAGTAAGAGGAGTTTTGTCAAAAATCAGGAGAAGGTTGTCT-CAGCTTC 584
|||||||||||||||||||||| | |||||| |||||||||||||| || | |||||||
Sbjct 752 GGATCTTCCCGGAGTAAGAGGAATACTGTCAAGAATCAGGAGAAGGTAGT-TACAGCTTC 810
Query 585 TGCTACAGCTAAGAAATGGGTCAGGTTGAGTTATGATGGTGTCGATCCTAAAAATTTCAT 644
||||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct 811 TGCTACAGCTAAGAAATGGGTCAGGTTGAGTTATGATGGAGTCGATCCTAAACATTTCAT 870
Query 645 TGGGCTGCAATGCAAGGCAAGCTTTCAGCTATATAGTTATGTGGTTTTTTGGCCATTGGA 704
| || || | |||| | || | | ||||||||||||||||||
Sbjct 871 T-GG--GC--T-----GCAA----T--GC-----A---A---GGTTTTTTGGCCATTGGA 903
Query 705 TGCTGTTTGGTATCCTGGTTCTATCGTCAGATATAATGTAGAGACAAAGCATCACATTGT 764
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 904 TGCTGTTTGGTATCCTGGTTCTATCGTCGGATATAATGTAGAGACAAAGCATCACATTGT 963
Query 765 CAAATATGGAGATGGAGATGGCGAGGAATTAGCTCTTCGTCGGGAAAAGATCAAATTTTT 824
|||||||||||||||||||| |||||||||||||||||||| ||||||||||| |||||
Sbjct 964 TAAATATGGAGATGGAGATGGAGAGGAATTAGCTCTTCGTCGTGAAAAGATCAAGTTTTT 1023
Query 825 AATTTCTCGTGACGAGATGGAGTTGCTAAACATGAAGTTCGGTACTAATGATGTCGCCGT 884
||||||||||||||| ||||||||||||||||||||||| |||||||||||||| | |||
Sbjct 1024 AATTTCTCGTGACGACATGGAGTTGCTAAACATGAAGTTTGGTACTAATGATGTGGTCGT 1083
Query 885 TCATGGTCAAGATTATGATGAACTGGTTATATTGGCTGCTTCTTTTGAGGATTGCCATGA 944
| ||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||
Sbjct 1084 TGATGGTCAAGATTATGATGAACTGGTTATATTGGCTGCTTCTTTTGAGGAGTGCCAAGA 1143
Query 945 TTTTGAGCCTAGAGACATCATATGGGCGAAACTAACAGGTCATGCTATGTGGCCAGCAAT 1004
||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1144 TTTTGAGCCTAGAGACATCATATGGGCCAAACTAACTGGTCATGCTATGTGGCCAGCAAT 1203
Query 1005 TATTGTTGATGAGTCTGTTATTGTAAAGCGGAAAGGTCTAAACAACAAGG-CATCTGGAG 1063
||| || |||||||||||||||||||||||||||||||||||||||||| | |||||||
Sbjct 1204 TATCGTGGATGAGTCTGTTATTGTAAAGCGGAAAGGTCTAAACAACAAGATC-TCTGGAG 1262
Query 1064 GAAGATCTGTCCTCGTACAGTTTTTCGGCACCCATGATTTTGC 1106
||||||| ||||||||||||||||| |||||||||||||||||
Sbjct 1263 GAAGATCAGTCCTCGTACAGTTTTTTGGCACCCATGATTTTGC 1305
> AT2G31650.1 | Symbols: ATX1, SDG27 | homologue of trithorax |
chr2:13455272-13462181 REVERSE LENGTH=3365
Length=3365
Score = 972 bits (526), Expect = 0.0
Identities = 947/1141 (83%), Gaps = 66/1141 (6%)
Strand=Plus/Plus
Query 1128 GCTTCCAGGAAGGATGGA-TCAACTTCAAAAAGTTGCTGATACTGATTG-TTCGGA-AAG 1184
|||||||| ||| || || |||||||||||| | |||||| ||| ||| ||| || | |
Sbjct 1182 GCTTCCAGAAAGAAT-GAGTCAACTTCAAAAGGGAGCTGATTCTG-TTGATTCCGATATG 1239
Query 1185 GACTAATAGTGGAGAAGAGGACAGCTCAAACTCGGGTGATGAT-TACACAAAAGATGGAG 1243
| |||||||| |||||||| | ||||||||||| |||| | | || |||||||
Sbjct 1240 G-CTAATAGTACAGAAGAGG---G---AAACTCGGGTGGTGATCTTC-TTAATGATGGAG 1291
Query 1244 AAGTCTGGTTGCA-ACCAACAGGAA-TTGGAGA-TTGCTTGCATAGAATAGGCGATCTGC 1300
|||| |||||| | ||||||| ||| || ||| || | ||||| |||||| |||||||
Sbjct 1292 AAGTGTGGTTG-AGACCAACA-GAACATGTAGACTT-CCGGCATATAATAGGGGATCTGC 1348
Query 1301 AAATAATGAACCTTGG-AAGGATCGTGACAGACTCAGAATTTTTCAAGGAT-AGTAAGCA 1358
|||||| || ||||| |||| | ||||||||||| | |||||||||||| || || ||
Sbjct 1349 TAATAATAAATCTTGGAAAGG-TTGTGACAGACTCTCAGTTTTTCAAGGATGAG-AATCA 1406
Query 1359 TACTTGGCCTGAAGGGTATACAGCTATAAGAAAATTTATATCACTAAAAGATCCTGA-TG 1417
|| |||||||||||||||||| || || ||||| || | |||||| | ||||| | | ||
Sbjct 1407 TATTTGGCCTGAAGGGTATACGGCGATGAGAAAGTTCACATCACTCACAGATCAT-AGTG 1465
Query 1418 CATCTGCCATGTACAAGATGGAAGTGCTTAGAGATGCCGAGTCAAAAAATC-GCC-CTGT 1475
|||||||| ||||||||||||||||||| |||||||||||| |||| | || || |||
Sbjct 1466 CATCTGCCTTGTACAAGATGGAAGTGCTCAGAGATGCCGAGACAAAGACTCATCCGCTG- 1524
Query 1476 TTTCAGAGTTACAACCA-ACAGCGGTGAGCAGTTCAAAGGGGAC-ACTCCATCTGCCTGC 1533
||| | ||| || || | || || |||||||||||| ||| | |||||||| ||||||
Sbjct 1525 TTT-ATAGTGAC-TGCAGATAGTGGAGAGCAGTTCAAA-GGGCCTACTCCATCGGCCTGC 1581
Query 1534 TGGAATAAAATATATAATAGGATAAAAAAGATTCAGAGTGCTTCTGATGGTCCTGATGGT 1593
||||| |||||||||||||||||||||||| | |||| |||||| ||||| || |
Sbjct 1582 TGGAACAAAATATATAATAGGATAAAAAAGGTCCAGA---ATTCTGACAGTCCTAATATT 1638
Query 1594 TTGGGTGAAGGACTTCATGAATCTGGTACAGATATGTTTGGCT-TCTCCAACCCAGAAGT 1652
|||||||||| ||| ||| |||||||||||| |||||||| | ||||||||||||||||
Sbjct 1639 TTGGGTGAAGAACTAAATGGATCTGGTACAGACATGTTTGG-TCTCTCCAACCCAGAAGT 1697
Query 1653 CGA-TAAACTTATTCAGGGGCTATTACAATCTAGACCACCTTCCAAGGTTTCTCA-GCGC 1710
| | ||||||| | |||| ||| | |||| |||||| | ||| | ||||| || | ||
Sbjct 1698 C-ATTAAACTTGTACAGGATTTATCAAAATCCAGACCATCGTCCCATGTTTC-CATGTGC 1755
Query 1711 AAATATAGTTCCGGAAAGTATCAAGATCATCCTACTGGTTACCGACCTGTACGGGTGGAC 1770
||| |||||| |||| | ||||| |||| |||||||||||||||||||| || || |||
Sbjct 1756 AAAAATAGTTTGGGAAGGCATCAAAATCAGCCTACTGGTTACCGACCTGTCCGTGTTGAC 1815
Query 1771 TGGAAAGATCTTGATAAGTGCAATGTCTGCCACATGGATGAGGAATATGAGAACAATTTG 1830
||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1816 TGGAAAGATCTCGATAAGTGCAATGTCTGCCACATGGATGAGGAGTATGAGAACAATTTG 1875
Query 1831 TTCTTGCAATGTGATAAATGTAGAATGATGGTCCATACTAGATGCTATGG-GCAGCTAGA 1889
||| |||||||||||||||||||||||||||||||| ||| ||||||||| | |||||||
Sbjct 1876 TTCCTGCAATGTGATAAATGTAGAATGATGGTCCATGCTAAATGCTATGGAG-AGCTAGA 1934
Query 1890 ACCCCGTGATGG--CATTCTGTGGTTATGCAACTTATGTCGTCCTGGCGCTCTTGATATT 1947
|||| ||||||| | || |||||||||||||||||||||||||||| |||| ||||||
Sbjct 1935 ACCCTGTGATGGTGC-TT-TGTGGTTATGCAACTTATGTCGTCCTGGTGCTCCTGATATG 1992
Query 1948 CCTCCTCGATGTTGTCTTTGTCCTGTACCAACAAAATATCTTTCAGGGGGCGCTATGAAG 2007
||||| || |||||||||||||||||| || ||||| |||||||||
Sbjct 1993 CCTCCACGGTGTTGTCTTTGTCCTGTAG--------TA-------GGGGGTGCTATGAAG 2037
Query 2008 CCGACAACTGATGGGCGCTGGGCTCATCTGGCGTGTGCCATATGGATCCCAGAAACCTGC 2067
|||||||||||||| ||||||||||||||||| ||||| ||||||||||||||||| ||
Sbjct 2038 CCGACAACTGATGGTCGCTGGGCTCATCTGGCTTGTGCTATATGGATCCCAGAAACATGT 2097
Query 2068 TTAT-TGGATGTCAAGAAGATGGAACCGATCGATGGAGTTAATAAAGTCAATAAGGATCG 2126
|||| || ||||||||||||||||||| || ||||| || |||||||||| ||||||||
Sbjct 2098 TTATCTG-ATGTCAAGAAGATGGAACCTATTGATGGGGTGAATAAAGTCAGCAAGGATCG 2156
Query 2127 TTGGAAATTGTTGTGCAGCATCTGTGGTGTATCTTATGGAGCTTGTATCCAATGTTCAAA 2186
||||||||| |||||| |||||| || ||||||||||||||||||||||||||||||||
Sbjct 2157 TTGGAAATTAATGTGCACCATCTGCGGGGTATCTTATGGAGCTTGTATCCAATGTTCAAA 2216
Query 2187 TAGTTCTTGTCGAGTGGCATATCATCCACTATGTGCACGTGCTGCTGGTCTCTGTGTTGA 2246
| ||||||||| ||||||||||||||||| || || || ||||||||||||||||||||
Sbjct 2217 CAATTCTTGTCGCGTGGCATATCATCCACTCTGCGCGCGAGCTGCTGGTCTCTGTGTTGA 2276
Query 2247 G 2247
|
Sbjct 2277 G 2277
Score = 887 bits (480), Expect = 0.0
Identities = 725/843 (86%), Gaps = 17/843 (2%)
Strand=Plus/Plus
Query 2344 GAAGCAGATCAGTGCATCCGCCTGCTTTCATTTTGCAAGAGGCATCGACAAACATCAAAT 2403
|||||||||||||| |||||| |||||||||| |||||| | |||||||||||||||| |
Sbjct 2308 GAAGCAGATCAGTGTATCCGCATGCTTTCATTCTGCAAGCGACATCGACAAACATCAACT 2367
Query 2404 GACC-ACTTAGAAACAG-AGTACATGATCAAA--C-C-AGCTCATAATA-TTGCCGAGTA 2456
| || | ||| | ||| || ||| ||||||| | | | ||||||| | || | |||||
Sbjct 2368 G-CCTGCCTAGGATCAGAAG-ACAGGATCAAATCCGCTA-CTCATAAAACTT-CTGAGTA 2423
Query 2457 TCTCCCACCTCCTAATCCATCTGGCTGTGCTCGCACTGAGCCATATAATTATCTTGGAAG 2516
||||||||| ||||||||||||||||||||||| || ||||| ||||||| | |||| ||
Sbjct 2424 TCTCCCACCACCTAATCCATCTGGCTGTGCTCGGACAGAGCCTTATAATTGTTTTGGCAG 2483
Query 2517 AAGAGGACGAAAGGAACCTGAAGCTCTTGCTGGTGCTTCTTCAAAACGATTATTTGTTGA 2576
|||||| ||||||||||||||||||||||||| |||||||||||| || |||||||||||
Sbjct 2484 AAGAGGGCGAAAGGAACCTGAAGCTCTTGCTGCTGCTTCTTCAAAGCGGTTATTTGTTGA 2543
Query 2577 GAATCAGCCGTACATTGTTGGTGGATACTCTCGACATGAATTTTCAACCTACGAACGCAT 2636
||||||||| || || ||||||| |||||| ||| ||| |||||||| ||| || ||||
Sbjct 2544 GAATCAGCCATATGTTATTGGTGGTTACTCTAGACTTGAGTTTTCAACGTACAAAAGCAT 2603
Query 2637 TTATGGATCAAAGATGTCACAAAT-AATTACTCCAAGCAATATTCTATCTATGGCTGAGA 2695
| | ||||| ||| ||||||| || || |||||||||||| ||||| |||||||||||||
Sbjct 2604 TCACGGATCCAAGGTGTCACAGATGAA-TACTCCAAGCAACATTCTTTCTATGGCTGAGA 2662
Query 2696 AATATACATTCATGAAGGAAACGTACAGGAAGAGATTAGCATTTGGGAAATCGGGAATTC 2755
|||||| || ||||| |||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 2663 AATATAGATACATGAGGGAAACATACAGGAAGAGATTAGCATTTGGGAAATCAGGAATTC 2722
Query 2756 ATGGTTTTGGGATCTTTGCAAAGCTTCCGCACAGGGCGGGAGATATGATGATTGAGTACA 2815
|||||||||| || |||||||||||||| |||||||||||||||||||||||||| || |
Sbjct 2723 ATGGTTTTGGCATTTTTGCAAAGCTTCCTCACAGGGCGGGAGATATGATGATTGAATATA 2782
Query 2816 CTGGTGAACTTGTTAGGCCACCAATAGCTGACAAGAGAGAGCATCTTATATACAACTCAA 2875
| || ||||||||||| || ||||||||||||| ||||| || || || ||||| ||||
Sbjct 2783 CCGGAGAACTTGTTAGACCGTCAATAGCTGACAAAAGAGAACAACTCATCTACAATTCAA 2842
Query 2876 TGGTGGGTGCTGGGACCTATATGTTTAGAATTGATAATGAGCGAGTCATAGACGCAACAA 2935
|||||||||| ||||| || ||||||||||| ||| |||||||||||||||| || ||||
Sbjct 2843 TGGTGGGTGCAGGGACTTACATGTTTAGAATCGATGATGAGCGAGTCATAGATGCTACAA 2902
Query 2936 GGACAGGCAGCATTGCCCACCTCATCAATCACTCATGTGAGCCAAATTGCTATTCAAGAG 2995
||||||| |||||||| ||||| || ||||| ||||||| ||| ||||||||||| |||
Sbjct 2903 GGACAGGAAGCATTGCTCACCTGATTAATCATTCATGTGTGCCCAATTGCTATTCTCGAG 2962
Query 2996 TCATTAGTGTTAATGGTGATGAGCATATTATCATATTTGCAAAGAGAG-ATGTTGCAAAA 3054
|||| | ||||||||| |||||||| ||||||||||| |||||||| | || | | |||
Sbjct 2963 TCATCACTGTTAATGGAGATGAGCACATTATCATATTCGCAAAGAG-GCATATCCCTAAA 3021
Query 3055 TGGGAGGAGCTGACCTATGACTATAGGTTCTTTTCAATTGATGAGCGCCTTGCATGTTAC 3114
||||| |||||||||||||||||||||||||||||||| | ||||||||| |||||| |
Sbjct 3022 TGGGAAGAGCTGACCTATGACTATAGGTTCTTTTCAATCGGGGAGCGCCTTTCATGTT-C 3080
Query 3115 -TGTGGTTTCCCAAGATGCCGGGGTGTTGTTAATGACACAGAAGCCGAAGAACAACAGGC 3173
||||| |||||| | || || |||||||||||||| |||||||| ||||||||||| ||
Sbjct 3081 GTGTGGCTTCCCAGGGTGTCGAGGTGTTGTTAATGATACAGAAGCTGAAGAACAACATGC 3140
Query 3174 AAA 3176
|||
Sbjct 3141 AAA 3143
Score = 132 bits (71), Expect = 3e-29
Identities = 132/160 (83%), Gaps = 10/160 (6%)
Strand=Plus/Plus
Query 507 TAGCGGAAATAAACAAGATGGATCTTCCCGGAGTAAGAGGAGT-TT-T-GTCAAAAATCA 563
||| || ||||| ||| |||| || ||||| || ||| || || || | | ||| |||||
Sbjct 483 TAGTGGGAATAAGCAAAATGGGTCATCCCGAAGGAAG-GG-GTCTTCTAG-CAAGAATCA 539
Query 564 GGAGAAGGTTGTCTC-AGCTTCTGC-TACAGCTAAGAAATGGGTCAGGTTGAGTTATGAT 621
||| |||| | ||| |||||| | | ||||||||||||||||||||||||||||||||
Sbjct 540 GGACAAGG-CGACTCTGGCTTCT-CGTTCAGCTAAGAAATGGGTCAGGTTGAGTTATGAT 597
Query 622 GGTGTCGATCCTAAAAATTTCATTGGGCTGCAATGCAAGG 661
||||| ||||||| || |||||| ||||||||||||||||
Sbjct 598 GGTGTGGATCCTACAAGTTTCATAGGGCTGCAATGCAAGG 637
> AT1G05835.1 | Symbols: | PHD finger protein | chr1:1762224-1762814
FORWARD LENGTH=520
Length=520
Score = 654 bits (354), Expect = 0.0
Identities = 390/408 (96%), Gaps = 0/408 (0%)
Strand=Plus/Plus
Query 3214 GTAGTTCAGTTTACTTGTGTCCAAATGTCAAAACCTCTCAAGTTCCTTCTTTGGTCATCT 3273
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 GTAGTTCAGTTTACTTGTGTCCAAATGTCAAAACCTCTCAAGTTCCTTCTTTGGTCATCT 60
Query 3274 CTTGCTCTATTGCTTCTTCAGATAGGTTCTGGGGCAATATGTGAGAGCAAAAGCAGCGAA 3333
|||||||| ||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 61 CTTGCTCTCTTGCTTCTTCAAATAGGTTCTGGGGCAATATGTGAGGGCAAAAGCAGCGAA 120
Query 3334 CCAGCAGTGAGGCAGACACAGGTGAAGTGGAGACAAGGAAAGAAGTTCAGAGTGGAGGTA 3393
|| || ||||||||||| ||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 121 CCGGCGGTGAGGCAGACGCAGGTGAAGTGGAGAGAAGGAAAGAAGTTCAGAGTCGAGGTA 180
Query 3394 ATGAACAAATGTCCCATGTGTCCAATCATCAACCTTCGTCTGAAATGTCAAGGATTTCCT 3453
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 ATGAACAAATGTCCCATGTGTCCAATCATCAACCTTCGTCTGAAATGTCAAGGATTTCCT 240
Query 3454 CAGACGCTTGTGGACCCCACACTCCTCCGCGTTCTCTCCTCTTACACCGGAAACTGTGTC 3513
||| ||||||||||||||||| ||||||| ||||||||||||| | |||||||||||||
Sbjct 241 CAGTCGCTTGTGGACCCCACATTCCTCCGTGTTCTCTCCTCTTCCGCCGGAAACTGTGTG 300
Query 3514 GTTAACGATGGCCTGCCGCTGAGTCCAATGCAGACTCTCTCCTTCAACTACTCCAACTCA 3573
|||||||||||| |||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct 301 GTTAACGATGGCTTGCCACTGAGTCCAATGCAGACTCTCTCCTTCAACTACTCCAACACA 360
Query 3574 CACCAGTTTGCTCTGCGCCCTCTTTCTTGGTCTTTTCAGTGCGAGTAA 3621
||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 361 CACCAGTTTGCTCTGCGACCTCTTTCTTGGTCTTTTCAGTGCGAGTAA 408
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 180299993142
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5