BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg311738
Length=4743
Score E
Sequences producing significant alignments: (Bits) Value
AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:20... 7251 0.0
AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tiss... 2076 0.0
> AT1G06670.1 | Symbols: NIH | nuclear DEIH-boxhelicase | chr1:2040433-2047612
FORWARD LENGTH=5144
Length=5144
Score = 7251 bits (3926), Expect = 0.0
Identities = 4455/4704 (95%), Gaps = 61/4704 (1%)
Strand=Plus/Plus
Query 1 ATGGCGAAGATGAAGAAGAATACGAAGCA-AGCTCGTCTCTGCGAAACCACTGGGGCTTG 59
|||||||||| ||||||| |||||||||| | |||||||||||||| |||||||||||||
Sbjct 135 ATGGCGAAGAAGAAGAAGGATACGAAGCATA-CTCGTCTCTGCGAAGCCACTGGGGCTTG 193
Query 60 GGCCACCAAGCTCCTTGAGGATTTTCGCGCCTCCGGGAACGATTCTTACGTCTTTGAGCA 119
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 194 GGCCACCAAGGTCCTTGAGGATTTTCGCGCCTCCGGGAACGATTCTTACGTCTTTGAGCA 253
Query 120 GCATCTTACAAATAGCGAACGTGGCATAATTCATCAGATGTGCCGAACTATGGGTATCCG 179
||| ||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 254 GCAACTTACAAATAGCGAACGTGGCATTATTCATCAGATGTGCCGAACTATGGGTCTCCG 313
Query 180 ATCAAAAAGTCACGGGACTGGGGAAGAAAGGCGTCTTTCTCTTTTCAAAAGAGATGACAT 239
|||||||||| |||||| ||||||||||||||||||||||||||||||| |||||| |||
Sbjct 314 ATCAAAAAGTAACGGGAGTGGGGAAGAAAGGCGTCTTTCTCTTTTCAAAGGAGATGGCAT 373
Query 240 TTCAAAGTCAGAC-AGCAAGCGTAGGTTTGAAACCAGAAATCAGAAAGGAAGAGAAGGAG 298
||||||||||||| || | ||||| || |||| ||||||||||||||| || ||||||||
Sbjct 374 TTCAAAGTCAGACAAG-AGGCGTATGTATGAAGCCAGAAATCAGAAAGAAAAAGAAGGAG 432
Query 299 AT-GGCTTGTCAAAGTCATACAGCAAGCATCGGTATGAAACCAAATTTCAGAAAGGAGGC 357
|| || || ||||||||||||||||||||||| |||||||||| ||||||||||| ||||
Sbjct 433 ATGGGATT-TCAAAGTCATACAGCAAGCATCGCTATGAAACCAGATTTCAGAAAGCAGGC 491
Query 358 GCTATAAG--A-A--AG------T-CACAGAAGCTTAAATGTGTGTCATTTCCACCAGAG 405
| |||||| | | || | || ||||||| ||||||||||||||||||||||||
Sbjct 492 GGTATAAGAAAGACGAGAATATCTCCAAAGAAGCTCAAATGTGTGTCATTTCCACCAGAG 551
Query 406 GCAAAAGCTGTCCTGCATGACTTATTTACTCGCTATCCACCTTGTGATGGCGATACTACA 465
|| |||||||| ||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 552 GCTAAAGCTGTTCTGCACGACTTATTTACTCGCTATCCACCTTGTGACGGCGATACTACA 611
Query 466 GGAACATCACTGGGTATATATACT---GGAAACGTCCACAGTAATTGGAAAGATGACTTC 522
|| ||||||||||||||||||||| ||||||||| ||||||||||||||||||| |||
Sbjct 612 GGGACATCACTGGGTATATATACTACGGGAAACGTCAACAGTAATTGGAAAGATGATTTC 671
Query 523 TTCAAGAAACCTCAAT-TGACAAAAAACGATATTCAAAATAAAGTGGCATCCCTGAGTTC 581
||||||||||||| || |||||||| |||||||| ||||||| |||| ||| ||||||||
Sbjct 672 TTCAAGAAACCTC-ATATGACAAAACACGATATTGAAAATAACGTGGTATCTCTGAGTTC 730
Query 582 TAGACTGGAAAAAGAAAAACGTTTTAGAGAGATCATTGAAGCACGATCAAAGCTTCCCAT 641
||||||| ||||||||| || |||| |||||||| |||||||||||||||||||||||||
Sbjct 731 TAGACTGAAAAAAGAAAGACATTTTCGAGAGATCTTTGAAGCACGATCAAAGCTTCCCAT 790
Query 642 CGCATCTTTTCGCGATGCCATTATATCTGCAGTGGAGTCCAATCAGGTTGTTCTTATTGC 701
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 791 CGCATCTTTTCGCGATGCCATTATATCTGCAGTGGAATCCAATCAGGTTGTTCTTATTGC 850
Query 702 TGGTGAAACTGGTTGTGGGAAAACTACTCAGGTGCCTCAATATCTTCTAGATCATATGTG 761
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 851 TGGTGAAACTGGTTGTGGGAAAACTACTCAGGTGCCTCAATATCTTCTAGATCATATGTG 910
Query 762 GCATAGTAAGCAAGAAGTGTGCAAAATCATTTGCACCCAACCACGTCGTATCTCAGCTAT 821
|||||||||| |||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 911 GCATAGTAAGAAAGAAGCATGCAAAATCATTTGCACCCAACCACGTCGTATCTCAGCTAT 970
Query 822 TTCAGTTTCTGATCGAATATCTTGGGAAAGAGGTGAAACTATTGGGAGAACTGTCGGCTA 881
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 971 TTCAGTTTCTGATCGAATATCTTGGGAAAGAGGTGAAACTATTGGGAGAACTGTCGGCTA 1030
Query 882 CAAGGTTCGGCTGCAAAGTGAAGGTGGAAGAGGGTCATCAGTTGTTTTCTGCACGAATGG 941
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 1031 CAAGGTTCGGCTGCAAAGTGAAGGTGGAAGAGAGTCATCAGTTGTTTTCTGCACGAATGG 1090
Query 942 CATTCTATTGAGGGTGCTTATAGGCAAAGGCGTTAACAGCTGTGTTCCTGATATAACTCA 1001
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1091 CATTCTATTGAGGGTGCTTATAGGCAAAGGCGTTAACAGCTCTGTTCCTGATATAACTCA 1150
Query 1002 CATTATTGTGGACGAAATCCATGAAAGGGACTCCTACTCTGATTTCATGTTAATGATTTT 1061
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1151 CATTATTGTGGACGAAATCCATGAAAGGGACTCCTACTCTGATTTCATGTTAATGATTTT 1210
Query 1062 AAGGGACTTGCTTCCGTCGAATCCTCATCTCCGACTGATTCTAATGAGTGCTACTCTTGA 1121
|||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||
Sbjct 1211 AAGGGACTTGCTTCCGTCTAATCCTCATCTCCGACTGATTCTGATGAGTGCTACTCTTGA 1270
Query 1122 TGCTGAGAGGTTTTCTGAGTATTTCGGAGGTTGCCCGGTTGTCCGAGTACCTGGATTCAC 1181
|||||||||||||||||| ||||| |||||||| || |||||||||||||||||||||||
Sbjct 1271 TGCTGAGAGGTTTTCTGAATATTTTGGAGGTTGTCCAGTTGTCCGAGTACCTGGATTCAC 1330
Query 1182 TTATCCAGTGAGAACCTTTTTTCTGGAAGATGCGCTCGCTGTCCTGAATTCAGACAAGAA 1241
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 1331 TTATCCAGTGAGAACCTTTTTTCTGGATGATGCGCTCTCTGTCCTGAATTCAGACAAGAA 1390
Query 1242 TAATCATCTACTTTCTGCTGACTCGAACATACCAAGTGACAAGCGTGATTTTAAAGATGA 1301
|| |||||||| || | ||| || | | | | || |||||||||||||||||
Sbjct 1391 TAGTCATCTAC-TT-T-CTG-CT-G----T--C-----A-AA-CGTGATTTTAAAGATGA 1432
Query 1302 AGATAAAGTTTCTTTAGATGAAGCAATCGACTTGGCATGGACAAATGATGAGTTTGATTG 1361
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1433 AGATAAAGTTTCTTTGGATGAAGCAATCGACTTGGCATGGACAAATGATGAGTTTGATTG 1492
Query 1362 TCTCATAGATCTAGTTTCATCTGAAGGAAGTCACGAGGCTTACAATTACCAGAACTCAAC 1421
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 1493 TCTCGTAGATCTAGTTTCATCTGAAGGAAGTCATGAGGCTTACAATTACCAGAACTCAAC 1552
Query 1422 GACAGGCCTAACACCACTTATGGTCTTTGCTGGAAAGGGCAGGGTTAGCGATGTCTGCAA 1481
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1553 GACAGGCCTAACACCACTTATGGTCTTTGCTGGAAAGGGCAGGGTTAGCGATGTCTGTAA 1612
Query 1482 GCTCCTTTCATTTGGCGCTGACTGTACACTGAAGTCCAAAGAAGGTATAACAGCATTAGT 1541
|||||||||| | ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1613 GCTCCTTTCAGTCGGCGCTGACTGTACACTGAAGTCCAAAGAAGGTATAACAGCATTAGA 1672
Query 1542 ATTAGCTGAAAAGGAGAATCAATTTGAAACTGCTCAAATAATCAGGGAACATGGGGGTAA 1601
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1673 ATTAGCTGAAAAGGAGAATCAATTTGAAACTGCTCAAATAATCAGGGAACATGCGGGTAA 1732
Query 1602 CATCCAGTCCAATTCTCAGCAAGCACAAGACTTACTTGATAAGTATATGGCGACAATCAA 1661
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1733 CATCCAGTCCAATTCTCAGCAAGCACAAGACTTACTTGATAAGTATATGGCGACAATCAA 1792
Query 1662 ACCAGAAGAAGTAGATGTGGGTCTTATAGTGAAGTTAATGAAGAAAATATGCAGCGATTC 1721
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1793 ACCAGAAGAAGTAGATGTGGGTCTTATAGTGAAGTTAATGAAGAAAATATGCAGCGATTC 1852
Query 1722 AGAAGCTGGTGCCATTCTTGTTTTTCTACCAGGGTGGGAGGAAATAAGGAAAACAAAAGA 1781
| ||| |||||||||||||||||||||||| ||||||||||||||||| |||||||||||
Sbjct 1853 AAAAGATGGTGCCATTCTTGTTTTTCTACCTGGGTGGGAGGAAATAAGCAAAACAAAAGA 1912
Query 1782 GAAATTACTTGATGATCGCTTTTTTGCAGATAGTGATAAATTCATCATTCTATGTCTTCA 1841
|||||| ||||||||||| ||||||||| |||||| ||||||||||||||||||||||||
Sbjct 1913 GAAATTGCTTGATGATCGGTTTTTTGCACATAGTGCTAAATTCATCATTCTATGTCTTCA 1972
Query 1842 CTCAAGGGTTCCAGCTGAGGAACAGAAGAAAGTTTTTAATCGCCCCCCTCGTGGTTGTCG 1901
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1973 CTCAAGGGTTCCAGCTGAGGAACAGAAGAAAGTTTTTAATCGCCCCCCTCGTGGTTGTCG 2032
Query 1902 CAAAATTGTGCTTGCGACAAATATTGCTGAATCAGCAGTTACCATCGATGATGTGGTTTA 1961
||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2033 CAAAATTGTACTTGCAACAAATATTGCTGAATCAGCAGTTACCATCGATGATGTGGTTTA 2092
Query 1962 TGTGATAGATAGCGGTCGGATGAAGGAAAAGAGTTATGATCCCTATAATGATGTGTCAAC 2021
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 2093 TGTGATAGATAGTGGTCGGATGAAGGAAAAGAGTTATGATCCCTATAATGACGTGTCAAC 2152
Query 2022 GCTCCAGTCTTCTTGGGTATCAAAAGCAAATGCAAAACAGAGGGCGGGTCGAGCAGGCCG 2081
|||||| |||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 2153 GCTCCAATCTTCTTGGGTATCAAAAGCAAATGCAAAACAGAGGGCAGGCCGAGCAGGCCG 2212
Query 2082 TTGCCAAGCTGGCATTTGTTATCATCTATATTCTAAACTCCGGGCAGCGTCTTTGTCCGA 2141
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||
Sbjct 2213 TTGCCAAGCTGGCATCTGTTATCATCTATATTCTAAACTCCGGGCAGCGTCTTTGCCCGA 2272
Query 2142 ATATAGAGTTCCTGAAGTTATGAGAATGCCAGTGGATGAACTCTGCTTGCAGGTTAAGAT 2201
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2273 ATATAGAGTTCCTGAAGTTATGAGAATGCCAGTGGATGAACTCTGCTTGCAGGTTAAGAT 2332
Query 2202 GCTGGATCCGAATTGCAACGTAAATGATTTCCTTCACAAATTGATGGACCCGCCTGTTGC 2261
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2333 GCTGGATCCGAATTGCAACGTAAATGATTTCCTTCAGAAATTGATGGACCCGCCTGTTGC 2392
Query 2262 TCAAAGTATTGCAAATGCCTTAATCATCCTTAAAGATATTGGAGCTTTGACTCCTCAAGA 2321
||||||||||| |||||| |||||||||||||||||||||||||||||||||||| ||||
Sbjct 2393 TCAAAGTATTGAAAATGCATTAATCATCCTTAAAGATATTGGAGCTTTGACTCCTGAAGA 2452
Query 2322 AGAGCTGACAGAACTTGGACAGAAATTTGGTCAGCTTCCAGTTCATCCTCGGATTAGCAA 2381
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2453 AGAGCTGACTGAACTTGGACAGAAATTTGGTCAGCTTCCAGTTCATCCTCGGATTAGCAA 2512
Query 2382 GATGATTTATTTCGCCATATTAGTGAACTGTTTGGATCCAGCACTTATTTTGGCATGTGC 2441
||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 2513 GATGATTTATTTCGCCATATTAGTGAACTGTTTGGATCCAGCACTTATTCTGGCATGTGC 2572
Query 2442 AGCCGACGAGAAGGATCCGTTTACTATGCCCTTGTCGCCAGGTGATAGAAAAAAGGCTGC 2501
||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 2573 AGCTGACGAGAAGGATCCGTTTACCATGCCCTTGTCGCCAGGTGATAGAAAAAAGGCTGC 2632
Query 2502 TGCCGCAAAACATGAACTTGCATCGCTTTATGGAGACCACAGTGATCATCTTGCCACTGT 2561
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2633 TGCCGCAAAACATGAACTTGCATCGCTTTATGGAGACCACAGTGATCATCTTGCCACTGT 2692
Query 2562 TGCAGCTTTTCAGTGCTGGAAAAATGCAAAAGAAAGTGGTCAAGCTAAGGAGTTTTGTTC 2621
|| |||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 2693 CGCGGCTTTTCAGTGCTGGAAAAATGCAAAAGCAAGTGGTCAAGCTAAGGAGTTTTGTTC 2752
Query 2622 TAAGTACTTCATATCCCAAATTGTCATGAAGAGGCTGGATGATCTGCGTCGCAAGCTTCA 2681
|||||||||||| |||||| |||||||||||||||||||||||||| |||||||||||||
Sbjct 2753 TAAGTACTTCATCTCCCAAGTTGTCATGAAGAGGCTGGATGATCTGTGTCGCAAGCTTCA 2812
Query 2682 GGGAGAACTTAGTAGACATGGGGTCATCCCTAGCAGC---TCAAACTGTAGCCTGAATGC 2738
||||||||||| ||||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct 2813 GGGAGAACTTAATAGACATGGGGTCATACCTAGCAGCAGCTCAAACTGTAGCCTGAATGC 2872
Query 2739 TCATGATCCGGGTATTCTCCGTGCTGTTATAGCAGTAGGATTGTACCCTATGTTGGGAAG 2798
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2873 TCATGATCCGGGTATTCTCCGTGCTGTTATAGCAGTTGGATTGTACCCTATGTTGGGAAG 2932
Query 2799 GATGTGCCCAGTTTCCAAGAATCAGACAAGGTCTGTAGTAGAGACTATTGCTGGAGCCAA 2858
|||||||||| |||||||||||| ||||||||||||| ||||||||||||||||||||||
Sbjct 2933 GATGTGCCCACTTTCCAAGAATCGGACAAGGTCTGTAATAGAGACTATTGCTGGAGCCAA 2992
Query 2859 AGTTCGTGTGCCCTCGCTATCAAAAAATGTTGACTTGTCCTCTACCAAGTATGACGAAGC 2918
||| |||||||||||||||||||| ||||||||| ||||||||||||||| |||||||||
Sbjct 2993 AGTCCGTGTGCCCTCGCTATCAAACAATGTTGACATGTCCTCTACCAAGTTTGACGAAGC 3052
Query 2919 TTTAATTGTTTTTGATGAGATCACTCGAGGAGATTGGGGTGTGCAGATAAGAAGCTGCAG 2978
||||||||||||||||||||||||||||||||||||||||||| |||||| |||||||
Sbjct 3053 TTTAATTGTTTTTGATGAGATCACTCGAGGAGATTGGGGTGTGGTGATAAGGAGCTGCAC 3112
Query 2979 TGTTCTTCCCACTATACCTTTGTTACTGTTTTCAAGAGAGATAGCCGTTTCTACTACAGA 3038
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 3113 TGTTCTTCCCACTATACCTGTGTTACTGTTTTCAAGAGAGATAGCCGTTTCTACTACAGA 3172
Query 3039 GAGCTATGATGCTGTTAAGAGTGATGACGAGGAAGACCACGAAGTAGAAAATGTAGGAGA 3098
|||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||
Sbjct 3173 GAGCTATGATGCTGTTAAGAGTGATGACGAGGAAGACCACAAAGTAGGAAATGTAGGAGA 3232
Query 3099 CGCAATGGACATAGATAAAGAAGGTGGTAGGCCTGGAGAGAAAATAATGCTTGCGCCGGA 3158
||| ||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||
Sbjct 3233 CGCGATGGACATAGATAAAGAAGTTGGTAGGCCTGGAGAGAAAATAATGCTTGGGCCGGA 3292
Query 3159 AAATTCAGTAAAGGTAGTAGTGGATCGGTGGCTGCCTTTCAAGGTTACAGCTTTTGAAAT 3218
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3293 AAATTCAGTAAAAGTAGTAGTGGATCGGTGGCTGCCTTTCAAGGTTACAGCTTTTGAAAT 3352
Query 3219 TGCTCAAATGTATATCTTGAGAGAGAGACTAATGGCGTCCATTTTGTTCAAGGTTAAACA 3278
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3353 TGCTCAAATGTACATCTTGAGAGAGAGACTAATGGCGTCCATTTTGTTCAAGGTTAAACA 3412
Query 3279 TCCAAAGGAAAATTTGCCGCCTCATCTTGGTGCTTCTATGTATGCAATAGCTTCTATTCT 3338
||||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 3413 TCCAAAGGAAAATTTGCCGCCTCATCTCGGTGCTTCTATGTATGCAATAGCTTCTGTTCT 3472
Query 3339 CTCATATGATAGCCTCGCACAATCTTCAGTTCAAACCGGAGCTGTGCAACCTATTGCTTC 3398
|||||||||||||||||||||||||||||||||||| | |||||||||||||||| ||||
Sbjct 3473 CTCATATGATAGCCTCGCACAATCTTCAGTTCAAACTGTAGCTGTGCAACCTATTACTTC 3532
Query 3399 AGTGGTAGATGCAACGAGTCCCAGAGATGATATACCTTCCGCTAACCCCAATGAGCTACG 3458
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||||| ||
Sbjct 3533 AGTGGTAGATGCAACGAGTCCCAGAGATGACATACCTTCCACTAACCCCAATGAGCTTCG 3592
Query 3459 GGAGCATGACCCGAACACTACTCCAATGGGGTCAAAGCTCGAATTAGCCAACAAGTTGGG 3518
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3593 GGAGCATGACCCGAACACTACTCCAATGGGGTCAAAGCTCGAATTAGCCAACAAGTTGGG 3652
Query 3519 TTTGGGTAATATGGAAGAGAGCTTGCCTTCAAATTTCGCTGATGGGAATGAGCAACCTGA 3578
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 3653 TTTGGGTAATATGGAAGAGAGCTTGCCTTCAAATTTCGCTGATGGGAATGAGCAACCTGA 3712
Query 3579 CCCAAACACTTCTCCAGTGGAAGATGTTTCGGTGGCTACAAAACAAAAGAAGATGCAGTC 3638
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 3713 CCCAAACACTTCTCCAGTGGAAGATGTTTCGGCGGCTACAAAACAAAAGAAGATGCAGTC 3772
Query 3639 AGAGTCCAAAAGGTGCAAGGCGCTCAACAACATTGATTTGGGGTATATTGAAGAGAATTT 3698
||||||||||||||||||| ||||||||||| | ||||||||| | ||||||||||||||
Sbjct 3773 AGAGTCCAAAAGGTGCAAGTCGCTCAACAACGTGGATTTGGGGAACATTGAAGAGAATTT 3832
Query 3699 TGGGAACATGGAAGAGAATGCTCCTTCTGATCTGGCTAATGGGAATGAGCAAACATTGCC 3758
||||||||||||||||| | |||||||||||||||| |||||||||||||||||||||
Sbjct 3833 CGGGAACATGGAAGAGAACCCACCTTCTGATCTGGCTATTGGGAATGAGCAAACATTGCC 3892
Query 3759 GAAGTCAGCTAGCAACTTGGACATGGGGTTTATGGAAGAGAACACGCCTTCTGATCTGGC 3818
||||| |||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 3893 GAAGTTAGCTAGCAACTTGGACATGGGGAACATGGAAGAGAACACGCCTTCTGATCTGGC 3952
Query 3819 GAATGGGAATGAGAAAACAGAGCCTAACTCAGCCAACAGCATGGAGTTGGGGAACATGGA 3878
|||||||||||||||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 3953 CAATGGGAATGAGAAAACAGAGCCTAACTCAGCCAACAGCATGGATTTAGGGAACATGGA 4012
Query 3879 AGAGAACAAGCCTTCTGATTTGGCAAATGGGAATAAGCAAAAAGAGTCTAAGTCAGTCAG 3938
|||||||| |||||||||||||||||||||||||||| |||||||| |||||||||||||
Sbjct 4013 AGAGAACACGCCTTCTGATTTGGCAAATGGGAATAAGAAAAAAGAGCCTAAGTCAGTCAG 4072
Query 3939 CAAGTTGGATCTGGGTAGGGAGAAAGAGAGCATTCCTTCTAATTTCG-CTAATGGAAATG 3997
|||||||||||||||||| ||||||| |||||||||||||||| ||| | ||||||||||
Sbjct 4073 CAAGTTGGATCTGGGTAGCGAGAAAGTGAGCATTCCTTCTAATCTCGTC-AATGGAAATG 4131
Query 3998 AGCAACGTGACCCAAACATTGCTCCAGCTGAAGATGCTTCAGCGGCTAAGCAACCAGAAA 4057
|||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 4132 AGCAACATGACCTAAACATTGCTCCAGGTGAAGATGCTTCAGCGGCTAAGCAACCAGAAA 4191
Query 4058 AGAAGCGATCAAGGTCCAAAAAGTGCAAATCAGGCAACAACCTGGATTTGGGGAAGATGG 4117
|||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||
Sbjct 4192 AGAAGCGATCCAGGTCTAAAAAGCGCAAATCAGGCAACAACCTGGATTTGGGGAAGATGG 4251
Query 4118 AAAAGAGCAAGCCCTCCGATCTGGCAAACGGGAATGAGCAAACAGAGCCCAAGTCAGCCA 4177
||||||||||||| |||||||||||||| | |||||||||||||||||||||||||||||
Sbjct 4252 AAAAGAGCAAGCCTTCCGATCTGGCAAATGAGAATGAGCAAACAGAGCCCAAGTCAGCCA 4311
Query 4178 ACAACTTGGATTTAGGGAATATGGAAGAGAACACGCCTTCGGATCTGGCTAATGAGAATG 4237
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 4312 ACAACTTGGATTTAGGGAATATGAAAGAGAACACGCCTTCGGATCTGGCTAATGAGAATG 4371
Query 4238 AGCAAACAGTGCTTAAGCTACCTAACAACTCGGATAATGATAACATGGAAGAGAGCTTGC 4297
||||||||| ||||| ||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 4372 AGCAAACAGAGCTTAGGCTACCTAACAACTCGGATTATGGTAACATGGAAGAGAGCTTGC 4431
Query 4298 CTTTCAATCTTGCTAATGGTGATGAACAACCTGACCCAACCACTGCTCCAATGGAAGCTG 4357
|||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct 4432 CTTTGAATCTTGCTAATGGGGATGAACAACCTGACCCAACCACTGCTCCAATGGAAGCTG 4491
Query 4358 CTTCAGTGGCTAAGCAACCAAAAAAGAAGCGATCAAGGTCGAAAAAGTGCAAATTAGTCA 4417
|| | | ||||||||||||||||||||||||||| ||||||||||||| |||||
Sbjct 4492 CT--A------A-GCAACCAAAAAAGAAGCGATCAAGGTCCAAAAAGTGCAAATCAGTCA 4542
Query 4418 ACAACCTGGATTTGGGGAACATGGAAGAGAAGAAGCCTTCTGATATGGCTAATGGGAATG 4477
|||||||||| ||||||||||||||||| || |||||||||||| |||| || || ||||
Sbjct 4543 ACAACCTGGACTTGGGGAACATGGAAGAAAACAAGCCTTCTGATCTGGCAAACGGAAATG 4602
Query 4478 AGCAGAAAGAGGCTAAGTCAGTCAGCAGGTTGGATCCGAGTAAGGATAAAGAGAGCATCC 4537
|||| ||||| || ||||||||| ||||||||||||| ||||||| ||||||||||| |
Sbjct 4603 AGCAAAAAGATCCTGAGTCAGTCAACAGGTTGGATCCGGGTAAGGAGAAAGAGAGCATTC 4662
Query 4538 CTTCGAATCTTGTCAGTGGGAATGAGCAACCTGACTCAAACAACACTGCTCCAGTGGCTA 4597
|||||||||||||||||||||||||||||||||||||||||| | |||||||| |||
Sbjct 4663 CTTCGAATCTTGTCAGTGGGAATGAGCAACCTGACTCAAACA-C--TGCTCCAG---CTA 4716
Query 4598 AGAAACCAAAAAGGAAAAAGCGCAAATTAGCTAACAACTTCGATTCGGGTAACAATATTG 4657
|||||||||||| ||||||||||||||||||||||||||| ||||||| ||||||||| |
Sbjct 4717 AGAAACCAAAAAAGAAAAAGCGCAAATTAGCTAACAACTTTGATTCGGTTAACAATATGG 4776
Query 4658 AAGGGAAAATGCCTTCTACTAATG 4681
||| |||||||||||| |||||||
Sbjct 4777 AAGAGAAAATGCCTTCCACTAATG 4800
Score = 292 bits (158), Expect = 2e-77
Identities = 380/483 (79%), Gaps = 31/483 (6%)
Strand=Plus/Plus
Query 3771 CAACTTGGACATGGGGTTTATGGAAGAGAACACGCCTTCTGATCTGGCGAATGGGAATGA 3830
|||| |||| ||||| |||||| ||| || |||||| |||||||| |||| ||||||
Sbjct 4229 CAACCTGGATTTGGGGAAGATGGAAAAGAGCAAGCCTTCCGATCTGGCAAATGAGAATGA 4288
Query 3831 GAAAACAGAGCCTAACTCAGCCAACAGCATGGAGTTGGGGAACATGGAAGAGAACAAGCC 3890
| |||||||||| || |||||||||| | |||| || ||||| ||| ||||||||| |||
Sbjct 4289 GCAAACAGAGCCCAAGTCAGCCAACAACTTGGATTTAGGGAATATGAAAGAGAACACGCC 4348
Query 3891 TTCTGATTTGGCAAATGGGAATAAGCAAAAAGAGTCTAAGTC-AGTC-AGCAAGTTGGA- 3947
||| ||| |||| |||| |||| |||||| |||| || || | | | | ||| | |||
Sbjct 4349 TTCGGATCTGGCTAATGAGAATGAGCAAACAGAG-CTTAGGCTA-CCTAACAACTCGGAT 4406
Query 3948 TCTGGGTAGGGA-GAAAGAGAGCATT-CCTTCT-AAT-TTCGCTAATGGAAATGAGCAAC 4003
| | |||| | | |||||||| || |||| | ||| || |||||||| |||| ||||
Sbjct 4407 TAT-GGTA-ACATGGAAGAGAGC-TTGCCTT-TGAATCTT-GCTAATGGGGATGAACAAC 4461
Query 4004 GTGACCCAAACATTGCTCCAGCTGAAGATGCTTCAGCGGCTAAGCAACCAGAAAAGAAGC 4063
|||||||| || ||||||| || || ||| |||||||||||| |||||||||
Sbjct 4462 CTGACCCAACCACTGCTCCA-ATG--GA------AGCTGCTAAGCAACCAAAAAAGAAGC 4512
Query 4064 GATCAAGGTCCAAAAAGTGCAAATCAGGCAACAACCTGGATTTGGGGAAGATGGAA-AAG 4122
||||||||||||||||||||||||||| |||||||||||| |||||||| |||||| ||
Sbjct 4513 GATCAAGGTCCAAAAAGTGCAAATCAGTCAACAACCTGGACTTGGGGAACATGGAAGAAA 4572
Query 4123 AGCAAGCCCTCCGATCTGGCAAACGGGAATGAGCAAACAGAGCCCAAGTCAGCCAACAAC 4182
| |||||| || |||||||||||||| |||||||||| ||| || |||||| |||||
Sbjct 4573 A-CAAGCCTTCTGATCTGGCAAACGGAAATGAGCAAAAAGATCCTGAGTCAGTCAACAGG 4631
Query 4183 TTGGATTTAGGGAATATG-GAA-GAGAACACGCCTTCGGATCTGGCTAA-TGAGAATGAG 4239
|||||| ||| | | | ||| |||| || |||||| |||| | | | || |||||||
Sbjct 4632 TTGGATCC-GGGTA-AGGAGAAAGAGAGCATTCCTTCGAATCTTG-TCAGTGGGAATGAG 4688
Query 4240 CAA 4242
|||
Sbjct 4689 CAA 4691
> AT2G30800.1 | Symbols: HVT1, ATVT-1 | helicase in vascular tissue
and tapetum | chr2:13120353-13126770 REVERSE LENGTH=4267
Length=4267
Score = 2076 bits (1124), Expect = 0.0
Identities = 2246/2773 (81%), Gaps = 135/2773 (5%)
Strand=Plus/Plus
Query 374 AGAAGCTTAAATGTGTGTCATTTCCACCAGAG-GCAAAAGCTGTCCTGCATGACTTATTT 432
||||||| ||||||||||||||||| || | | ||| | | | | ||||| || ||||||
Sbjct 428 AGAAGCTCAAATGTGTGTCATTTCCGCC-GGGAGCAGATGTTATTCTGCAGGAGTTATTT 486
Query 433 ACTCGCTATCCACCTTGTGATGGCGATACTACAGGAACATCACTGGGTATA-TA-TACTG 490
|||| || |||||||||||||| ||||| | | |||||| | | | || | |||
Sbjct 487 ACTCATTACCCACCTTGTGATGGAGATACGGCTGCAACATCGTTTACCA-AGTACT-CTG 544
Query 491 G--A-AA-CGTCCAC-AGTA-ATTGGAAAGATGACTTCTTCAAGAAACCTCA-ATTGA-C 542
| | || || || || | | ||||||||||| || ||| |||||| || ||| | |
Sbjct 545 GTAACAAGGGTAAACAAGGACAATGGAAAGATGATTTTTTCCGGAAACCACAGATT-AGC 603
Query 543 AAAAAACGATATTC-AAAATAAAGTGGCATCCCTGAGTTCTAGACTGGAA-AAAGA-AAA 599
| | || |||| | || ||||||||||| ||||||||||||| || || || |||
Sbjct 604 -AGTGAGGAGATTCTAGAA-AAAGTGGCATCTTTGAGTTCTAGACT-TAAGAAGGATAAA 660
Query 600 ACGT-TTTAGAGAGATCATTGAAGC-ACGATCAAAGCTTCCCATCGCATCTTTTCGCGAT 657
| | || || ||||||| | |||| || ||||||||||||||| |||| ||| ||
Sbjct 661 GC-TCTTAAG-GAGATCACT-AAGCTGCGGTCAAAGCTTCCCATCACATCCTTTAAAGAC 717
Query 658 GCCATTATATCTGCAGTGGAGTCCAATCAGGTTGTTCTTATTGCTGGTGAAACTGGTTGT 717
|| |||| |||||||||||| |||||||||||| |||| ||| ||||||||||||||||
Sbjct 718 GCAATTACATCTGCAGTGGAATCCAATCAGGTTATTCTCATTTCTGGTGAAACTGGTTGC 777
Query 718 GGGAAAACTACTCAGGTGCCTCAATATCTTCTAGATCATATGTGG-CATAGTAAGCA-AG 775
|||||||||||||||||||||||||||||| |||| ||||||||| || || || | ||
Sbjct 778 GGGAAAACTACTCAGGTGCCTCAATATCTTTTAGACCATATGTGGTCA-AGCAA-AAGAG 835
Query 776 -AAGTGTGCAAAATCATTTGCACCCAACCACGTCGTATCTCAGCTATTTCAGTTTCTGAT 834
|| | |||||||| ||||||||||||| ||||| || || || || |||||||||||
Sbjct 836 AAACT-TGCAAAATTGTTTGCACCCAACCTCGTCGGATATCCGCCATGTCAGTTTCTGAA 894
Query 835 CGAATATCTTGGGAAAGAGGTGAAA-CTATTGG-GAGAACTGTCGGCTACAAGGTTCGGC 892
|||||||||| ||||||||||||| | ||||| || ||| | || ||||||||||| |
Sbjct 895 AGAATATCTTGTGAAAGAGGTGAAAGC-ATTGGAGAAAAC-ATTGGTTACAAGGTTCGAC 952
Query 893 TGCAAAGTGAAGGTGGAAGAG-GGTCATCAGTTGTTTTCTGCACGAATGGCATTCTATTG 951
| ||||| |||||||||| | |||||||||||||||||||||||||| ||||| ||
Sbjct 953 TCCAAAGCAAAGGTGGAAG-GCACTCATCAGTTGTTTTCTGCACGAATGGTATTCTCCTG 1011
Query 952 AGGGTGCTTATAGGCAAAGG--C-GTTAACAGCTGTGTTCCTGATATAACTCACATTATT 1008
||||||||| |||| ||||| | |||| ||| ||| |||| || ||||||||||| |||
Sbjct 1012 AGGGTGCTTGTAGGAAAAGGCTCTGTTAGCAG-TGT-TTCC-GACATAACTCACATCATT 1068
Query 1009 GTGGACGAAATCCATGAAAGGGACTCCTACTCTGATTTCATGTTAATGATTTTAAGGGAC 1068
||||| |||||||||||||| || | ||| |||||||||||||| ||| |||||||
Sbjct 1069 GTGGATGAAATCCATGAAAGAGATTGCTATTCTGATTTCATGTTGGCAATTATAAGGGAT 1128
Query 1069 TTGCTTCCGTCGAATCCTCATCTCCGACTGATTCTAATGAGTGCTACTCTTGATGCTGAG 1128
|||||||| || ||||| |||||||| |||||||| ||||||||||| ||||||||||||
Sbjct 1129 TTGCTTCCATCAAATCCCCATCTCCGTCTGATTCTCATGAGTGCTACGCTTGATGCTGAG 1188
Query 1129 AGGTTTTCT-GAGTATTTCGGAGGTTGCCCGGTTGTCCGAGTACCTGGATTCACTTATCC 1187
|| |||||| || ||||| |||||||||||||||||||| || |||||||||||||||||
Sbjct 1189 AGATTTTCTGGA-TATTTTGGAGGTTGCCCGGTTGTCCGTGTCCCTGGATTCACTTATCC 1247
Query 1188 AGTGAGAACCTT-TTTTCTGGAAGATGCGCTCGCTGTCCTGAATTCA-GACAAGAATAAT 1245
|||||||||||| | || |||| |||| |||| || | ||||| ||| | || |||||
Sbjct 1248 AGTGAGAACCTTATATT-TGGAGGATGTGCTCTCTATTCTGAAATCAGGTGGAG-ATAAT 1305
Query 1246 CATCTACTTTCTGCTGACTCGAACATACCAAG-TGACAAGCGTGATTTTAAAGATGAAGA 1304
|||||| ||| | ||| || ||| | || |||||| |||||| | ||||| ||
Sbjct 1306 CATCTAAGCTCTACCAACTTGAGTATATC-AGACCACAAGCTTGATTTGACGGATGAGGA 1364
Query 1305 TAAAGTTTCTTTAGATGAAGCAATCGA-CTTGGCATGGACAAATGATGAGTTTGATTG-T 1362
|||| || ||||||||||||||||| | |||||| ||||||||||| |||||||| ||
Sbjct 1365 TAAACTTGCTTTAGATGAAGCAATC-ATCTTGGCTTGGACAAATGACGAGTTTGA-TGCC 1422
Query 1363 CTCATAGATCTAGTTTCATCTGA-AGGAAGTCACGAGGCT-TACAATTACCAGAACTCAA 1420
||| ||||||||||||| ||| | ||||||||| || | | |||||||| ||| || |||
Sbjct 1423 CTCTTAGATCTAGTTTCTTCT-AGAGGAAGTCATGA-GATCTACAATTATCAGCAC-CAA 1479
Query 1421 -CGA-CAGGCCTAACACCACTTATGGTCTTTGCTGGAAAGGGCAGGGTTAGCGATGTCTG 1478
| | | || ||||||||||| |||||||||||||||||||||||| | || ||||||||
Sbjct 1480 TCAACCTGG-CTAACACCACTAATGGTCTTTGCTGGAAAGGGCAGGATCAGTGATGTCTG 1538
Query 1479 CAAGCTCCTTTCATTTGGCGCTGACTGTACAC-TGAAGTCCAAAGAAGGTATAACAGCAT 1537
|| |||||| || ||||| || || || | | | ||||| ||||| ||||| || ||||
Sbjct 1539 CATGCTCCTCTCCTTTGGTGCAGATTGGA-GCTTAAAGTCTAAAGATGGTATGACTGCAT 1597
Query 1538 TAGTATTAGCTGAA-AAGGAGAATCAATTTGAAACTGCTCAAATAATCAGGGAACATGGG 1596
||| ||| |||||| | ||||||||| | ||| ||||||||||||||||||| ||||
Sbjct 1598 TAGAATTGGCTGAAGCA-GAGAATCAACTAGAAGCTGCTCAAATAATCAGGGAGCATGCA 1656
Query 1597 GGTAACAT-CCAGTCCAATTCTCAGCAAGCACAAGACTTACTTGATAAGTATATGGCGAC 1655
| || | |||||| ||||||||||||| |||| | ||||||||||| || ||||||||
Sbjct 1657 GACAA-TTCCCAGTCTAATTCTCAGCAAGGACAACAGTTACTTGATAAATACATGGCGAC 1715
Query 1656 AATCAAACCAGAAG-AAGTAGATGTGGGTCTTATAGTGA-AGTTAATGAAGAAAATATGC 1713
|||||| |||| || | || |||||| |||||||| | ||||||||| |||||||||
Sbjct 1716 AATCAACCCAG-AGCAGGTCGATGTGAGTCTTATA-CAACAGTTAATGAGGAAAATATGT 1773
Query 1714 AGCGATTCAGAAG-CTGGTGCCATTCTTGTTTTTCTACCAGGGTGGGAGGAAATAAGGAA 1772
|||||||||||| | ||||| ||||||||||||||||| || ||||| || |||| ||
Sbjct 1774 GGCGATTCAGAAGAC-GGTGCGATTCTTGTTTTTCTACCTGGATGGGATGATATAAATAA 1832
Query 1773 AACAAAAGAGAAATTACTTGATGATCGCTTT-TTTGCAGATAGTGATAAATTC-ATCATT 1830
||||| | ||| ||||||||| || | |||| ||||||||||||| ||||||| | ||||
Sbjct 1833 AACAAGACAGAGATTACTTGA-GAACCCTTTCTTTGCAGATAGTGCTAAATTCGA-CATT 1890
Query 1831 CTATGTCTTCACTCAAGGGTTCCAGCTGAGGAACAGAAGAAAGTTTTTAATCGCCCCCCT 1890
||||||||||||||| ||||||||| | |||||||||||||||||||||||||||||||
Sbjct 1891 ATATGTCTTCACTCAATGGTTCCAGCAGGGGAACAGAAGAAAGTTTTTAATCGCCCCCCT 1950
Query 1891 CGTGGTTGTCGCAAAATTGTGCTTGCGACAAATATTGCTGAATCAGCAGTTACCATCGAT 1950
| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1951 CCAGGTTGTCGCAAAATTGTGCTTGCGACAAATATTGCTGAATCAGCAGTTACCATTGAT 2010
Query 1951 GATGTGGTTTATGTGATAGATAGCGGTCGGATGAAGGAAAAGAGTTATGATCCCTATAAT 2010
||||||||||||||||||||||| || ||||||||||||||||| |||||||| ||||||
Sbjct 2011 GATGTGGTTTATGTGATAGATAGTGGCCGGATGAAGGAAAAGAGCTATGATCCTTATAAT 2070
Query 2011 GATGTGTCAACGCTCCAGTCTTCTTGGGTATCAAAAGCAAATGCAAAACAGAGGGC-GGG 2069
|||| ||||| ||||| ||||||||||||||||||||||||||||||||| | | |||
Sbjct 2071 AATGTTTCAACTCTCCAATCTTCTTGGGTATCAAAAGCAAATGCAAAACAGCGT-CAGGG 2129
Query 2070 TCGAGCAGGCCGTTGCCAAGCTGGCATTTGTTATCATCTATATTCTAAACTCCGGGCAGC 2129
|||||||||||| |||||| ||||||||||||||||||| ||||||| ||| ||||||||
Sbjct 2130 TCGAGCAGGCCGCTGCCAACCTGGCATTTGTTATCATCTCTATTCTAGACTTCGGGCAGC 2189
Query 2130 GTCTTTGTCC-GAATATAGAGTTCCTGAAGTTATGAGAATGCCAGTGGATGAACTCTGCT 2188
||| || || || | || |||||||||| | | ||| ||||| || || ||||||||||
Sbjct 2190 CTCTATG-CCAGATTTTAAAGTTCCTGAAATCAAGAGGATGCCGGTAGAAGAACTCTGCT 2248
Query 2189 TGCAGGTTAAGATGCTGGATCCGAATTGCAACGTAAATGATTTCCTTCACAAATTGATGG 2248
| || |||||||| || ||||| ||||| || ||||||||||||||| ||| || |||
Sbjct 2249 TACAAGTTAAGATACTTGATCCAAATTGTAAAACAAATGATTTCCTTCAGAAACTGTTGG 2308
Query 2249 ACCCGCCTGTTGCTCAAAGTATTGCAAATGCCTTAATCATCCTTAAAG-ATATTGGAGCT 2307
|||||||||||| ||||||||||||||| ||||||| ||| || | || ||||||| ||
Sbjct 2309 ACCCGCCTGTTGATCAAAGTATTGCAAACGCCTTAAGCATACT-ACAGGATATTGGTGCC 2367
Query 2308 TTGACTCCTCAAGAAGAGCTGACAGAACTTGGACAGAAATTTGGTCAGCTTCCAGTTCAT 2367
|||| ||||| ||||||||||||||||||||| ||||||||||||| || |||||||||
Sbjct 2368 CTGACACCTCAGGAAGAGCTGACAGAACTTGGAGAGAAATTTGGTCATCTCCCAGTTCAT 2427
Query 2368 CCTCGGATTAGCAAGATGAT-TTATTTCGCCATATTAGTGAACTGTTTGGATCCAGCACT 2426
|||| ||||||||| ||| | || || ||| | ||||| |||||| |||||||||||||
Sbjct 2428 CCTCTGATTAGCAAAATGCTATTCTT-CGCTGTGTTAGTAAACTGTCTGGATCCAGCACT 2486
Query 2427 TATTTTGGCATGTGCAGCCGACGAGAAGGATCCGTTTACTATGCCCTTGTCGCCAGGTGA 2486
|| | ||||||||||||| ||| | ||||| || ||||| |||||| ||||||| | |||
Sbjct 2487 TACTCTGGCATGTGCAGCAGACTACAAGGAACCATTTACGATGCCCATGTCGCCTGTTGA 2546
Query 2487 TAGAAA-AAAGGCTGCTGCCGCAAAACATGAACTTGCATCGCTTTATGGAGACCACAGTG 2545
||| | |||| ||||||| ||||||| |||||||||||| |||| ||||| ||||||
Sbjct 2547 AAGACAGAAAG-CTGCTGCTGCAAAACTTGAACTTGCATCACTTTGTGGAGGTGACAGTG 2605
Query 2546 ATCATCTTGCCACT-GTTGCAGCTTTTCAGTGCTGGAAAAATGCAAAAGAAAGTGGTCA- 2603
|||| ||||| | | ||||| || ||| ||||||||||||| ||||||| ||| ||||
Sbjct 2606 ATCACCTTGC-AGTTGTTGCTGCCTTTGAGTGCTGGAAAAACGCAAAAGGAAGAGGTCTT 2664
Query 2604 --AGCTAAGGAGTTTTGTTCTAAGTACTTCATATC-CCAAATTG-TCATGAAGAGGCTGG 2659
||| | | ||||||| ||| ||||||| | || |||| | | | ||||||| | |||
Sbjct 2665 TCAGC-A-G-AGTTTTGCTCTCAGTACTTTGTCTCTCCAAGT-GCT-ATGAAGATGTTGG 2719
Query 2660 ATGATCTGCGTCGC-AAGCTTCAGG-GAGAACTTAGTAGACATGGGGTCATCCCTA--G- 2714
|| | ||||| || || ||| || | ||||||| ||||||||| | || |||| |
Sbjct 2720 ATCAAATGCGTAGCCAA-CTTGAGTCG-GAACTTAAAAGACATGGGATTATTCCTAACGA 2777
Query 2715 CAGCTCAAACTGTAGCCTGAATGCTCATGATCCGGGTATTCTCCGTGCTGTTATAGCAGT 2774
|| |||| ||||||| ||| | | |||||| ||||| ||||||||||| |||||||
Sbjct 2778 CATTTCAAGTTGTAGCCAAAATTCGCGTGATCCCGGTATACTCCGTGCTGTGCTAGCAGT 2837
Query 2775 AGGATTGTACCCTATGTTGGGAAGGAT-GTGCCCAG-TTTCC--AAGAATCAGACAAGGT 2830
||||||||| |||||| ||||||| || |||||||| ||| || |||| || | |
Sbjct 2838 AGGATTGTATCCTATGGTGGGAAG-ATTGTGCCCAGCTTTTGGTAATAATC-GA-A-GAA 2893
Query 2831 CTGTAGTAGAGACTATT-GCTGGAGCCAAAGTTCGTGTGCCCT-CGCTATCAAAAAATGT 2888
|| ||||||||||| | | ||| || ||||||||||| || | |||| ||||| || |
Sbjct 2894 CTATAGTAGAGACTGCTAG-TGGTGCTAAAGTTCGTGT-CCATTCGCTGTCAAACAAC-T 2950
Query 2889 TGA-CTTGTCCTCTACCAAGTATGACGAAGCTTTAATTGTTTTTGATGAGATCACTCGAG 2947
| | |||||| |||| |||||||| ||| ||||| | ||||| |||||||||||||| |
Sbjct 2951 TCAACTTGTCGTCTAAAAAGTATGATGAATCTTTACTCGTTTTCGATGAGATCACTCGTG 3010
Query 2948 GAGATTGG-GGTGTGCAGATAAGAAGCTGCAGTGTT-CTTCCC-A-CTATACCTTTGTTA 3003
||||| || || |||| ||||||| ||| | |||| || | | || | |||||||||
Sbjct 3011 GAGAT-GGAGGCATGCACATAAGAAACTGTACTGTTGCT-CGTGATCT-T-CCTTTGTTA 3066
Query 3004 CTGTTT-TCAAGAGAGATAGCCGTTTCTACTACAGAGAGCTA-TGATGCTGTTAAGAGTG 3061
|| | | |||| ||||||||| || | |||||| |||| | |||| ||| | | |||
Sbjct 3067 CT-TATCTCAACAGAGATAGCTGTGGCCCCTACAGGGAGC-AGTGATTCTGATGATAGTA 3124
Query 3062 ATGACGAGGAAGA 3074
|||| || |||||
Sbjct 3125 ATGAAGAAGAAGA 3137
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 236587303188
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5