BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg311987 Length=1446 Score E Sequences producing significant alignments: (Bits) Value AT1G09440.1 | Symbols: | Protein kinase superfamily protein | ... 2108 0.0 AT1G56720.1 | Symbols: | Protein kinase superfamily protein | ... 869 0.0 > AT1G09440.1 | Symbols: | Protein kinase superfamily protein | chr1:3045513-3047893 REVERSE LENGTH=1593 Length=1593 Score = 2108 bits (1141), Expect = 0.0 Identities = 1257/1314 (96%), Gaps = 3/1314 (0%) Strand=Plus/Plus Query 1 ATGTCTGGACTTAAGATCTGGCAAGCCATCGTTATCGCCATTGCGCTGTTCACCATTGTC 60 ||| |||||||||||||||||||||||||| ||||| ||||||| ||| ||| ||||||| Sbjct 193 ATGGCTGGACTTAAGATCTGGCAAGCCATCTTTATCACCATTGCACTGATCATCATTGTC 252 Query 61 ATACTCTCTGTTCTTTCATTTTGTCTCATTTGGAAAAAGAAATCAAGAAGATCCAAAACC 120 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 253 GTACTCTCTGTTCTTTCATTTTGTCTCATTTGGAAAAAGAAATCAAGAAGATCCAAAACC 312 Query 121 TTAAGTCTTCCCATCATCCAAACCCCTGTGGTGTCAAAGGAGATCAAGGAAGTCAGAATT 180 ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || Sbjct 313 TTAAGTCTTCCCATCATACAAACCCCTGTGGTGTCAAAGGAGATCAAGGAAGTCAGGATC 372 Query 181 GAGCA---TGTCTCAACGAGTAGTAACTTCGACCCTCAGGACGAAAACAACAATGAATCT 237 ||||| |||||||||||||||||||||||| |||||||| |||||||||||||||||| Sbjct 373 GAGCATGTTGTCTCAACGAGTAGTAACTTCGATCCTCAGGATGAAAACAACAATGAATCT 432 Query 238 GACAAATTCTTGCTTAATTTGGATATGGAGAAGAAGACAGAGAATGGTTTGAGTAGTAGC 297 ||||||||||||||||||||||| ||||||||||| | |||||||||||||||||||||| Sbjct 433 GACAAATTCTTGCTTAATTTGGAAATGGAGAAGAACAGAGAGAATGGTTTGAGTAGTAGC 492 Query 298 CGGTCTGGTTCAGGCAAAGAAGGTTATCTATGTGTTGCAAACCGGTCTTCTTCATCATTG 357 ||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||| Sbjct 493 CGGTCTGGTTCAGGCAAAGAAGGTTATTTATGTGTTGCAAACCGGTCTACTTCATCATTG 552 Query 358 TATGAGATGGCTACACCATCACCATCACCTCTTTCCGGTTTACCTGAGTCACATCTTGGA 417 ||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| Sbjct 553 TATGAGATGGCTACACCATCACCATCACCTCTTTCTGGTTTACCTGAGTCACACCTTGGA 612 Query 418 TGGGGTCATTGGTTTACTCTGAGAGATCTTGAAATAGCAACAAACAGATTCTCAAAGGAA 477 |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| Sbjct 613 TGGGGTCATTGGTTTACTCTGAGAGATCTTGAGATAGCAACAAACAGATTCTCAAAGGAA 672 Query 478 AATGTGATTGGTGAAGGAGGATATGGAATTGTATACCGAGGAGAGTTGGTCAATGGGTCT 537 |||||||||||||||||||| |||||| |||| |||||||| ||||||||||||||| | Sbjct 673 AATGTGATTGGTGAAGGAGGCTATGGAGTTGTTTACCGAGGCGAGTTGGTCAATGGGAGT 732 Query 538 CATGTCGCCGTGAAAAAGATCCTGAACCACTTGGGACAAGCTGAGAAAGAGTTTAGAGTA 597 | ||| ||||||||||||||||| ||||||||||||||||| |||||||||||||||||| Sbjct 733 CTTGTTGCCGTGAAAAAGATCCTAAACCACTTGGGACAAGCAGAGAAAGAGTTTAGAGTA 792 Query 598 GAGGTTGATGCTATTGGTCATGTGCGTCACAAGAACTTGGTACGGCTTCTAGGATACTGC 657 ||||| |||||||| ||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 793 GAGGTAGATGCTATAGGTCATGTGCGTCACAAGAACTTGGTACGTCTTCTAGGATACTGC 852 Query 658 ATTGAAGGCACAAACAGGATATTGGTTTATGAGTATATGAACAATGGGAACCTCGAAGAA 717 ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| Sbjct 853 ATTGAAGGCACAAACAGGATATTGGTTTATGAGTATATGAACAATGGGAACCTTGAAGAA 912 Query 718 TGGCTTCACGGAGCAATGAAACATCACGGATATCTAACTTGGGAAGCTCGAATGAAAATT 777 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| || Sbjct 913 TGGCTTCACGGAGCAATGAAACATCATGGATATCTAACTTGGGAAGCTCGAATGAAAGTT 972 Query 778 CTCACTGGCACATCCAAGGCTCTCGCATATCTACACGAGGCAATCGAACCAAAAGTAGTG 837 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||| ||| Sbjct 973 CTCACTGGAACATCCAAGGCTCTTGCATATCTACACGAGGCAATCGAACCAAAAGTGGTG 1032 Query 838 CATAGAGACATCAAGTCAAGCAATATCTTGATCGATGATAGATTCAACGCAAAGATTTCG 897 ||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||| Sbjct 1033 CATAGAGACATCAAGTCGAGCAACATCTTGATCGATGATAGATTCAATGCAAAGATTTCT 1092 Query 898 GATTTTGGCCTTGCCAAGTTACTTGGAGATGGGAAAAGCCATGTGACTACTCGAGTCATG 957 ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| Sbjct 1093 GATTTTGGCCTTGCCAAGTTACTTGGAGATGGGAAAAGCCATGTGACTACTAGAGTCATG 1152 Query 958 GGAACATTTGGGTATGTTGCTCCTGAGTATGCGAATACCGGACTTTTGAATGAAAAGAGT 1017 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1153 GGAACATTTGGGTATGTTGCTCCTGAGTATGCGAATACCGGACTTTTGAATGAAAAGAGT 1212 Query 1018 GATGTGTACAGCTTTGGTGTCTTGGTCTTAGAAGCAATAACCGGAAGAGATCCTGTGGAT 1077 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1213 GATGTGTACAGCTTTGGTGTCTTGGTCTTAGAAGCAATAACCGGAAGAGATCCTGTGGAT 1272 Query 1078 TACGCGCGTCCTGCTAATGAGGTGAATCTAGTTGAGTGGTTGAAAATGATGGTAGGATCT 1137 |||||||| |||||||||||||||||| | |||||||||||||| ||||||||||||||| Sbjct 1273 TACGCGCGGCCTGCTAATGAGGTGAATTTGGTTGAGTGGTTGAAGATGATGGTAGGATCT 1332 Query 1138 AAGAGATTAGAAGAAGTCATTGATCCAAACATAGCGGTTAGGCCAGCGACTAGAGCACTG 1197 ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| Sbjct 1333 AAGAGATTAGAAGAAGTCATTGATCCAAACATAGCAGTTAGGCCAGCGACTAGAGCACTG 1392 Query 1198 AAACGAGTACTTCTTACAGCACTTAGATGCATTGATCCTGATTCTGAAAAGAGACCTAAA 1257 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1393 AAACGAGTACTTCTTACAGCACTTAGATGCATTGATCCTGATTCTGAAAAGAGACCTAAA 1452 Query 1258 ATGAGCCAAGTTGTTCGTATGCTCGAGTCTGAGGAATATCCCATACCAAGAGAG 1311 ||||| |||||||| |||||||| ||||||||||||||||| ||||||||||| Sbjct 1453 ATGAGTCAAGTTGTGCGTATGCTGGAGTCTGAGGAATATCCTGTACCAAGAGAG 1506 Score = 143 bits (77), Expect = 5e-33 Identities = 85/89 (96%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 1358 AGGAGCGGAGAGTGCGCAGAACTCAAGAGGAAAACTCAGATACCGATAGAAGCACACCGG 1417 |||||||||||||||||||||| |||||||||||||| |||||||||||||||| ||||| Sbjct 1505 AGGAGCGGAGAGTGCGCAGAACGCAAGAGGAAAACTCGGATACCGATAGAAGCAGACCGG 1564 Query 1418 TTTCAAGATCACAGAGCAAGAGACAGTAA 1446 |||||||||||||||||||||||| |||| Sbjct 1565 TTTCAAGATCACAGAGCAAGAGACTGTAA 1593 > AT1G56720.1 | Symbols: | Protein kinase superfamily protein | chr1:21263420-21265620 REVERSE LENGTH=1750 Length=1750 Score = 869 bits (470), Expect = 0.0 Identities = 819/984 (83%), Gaps = 38/984 (4%) Strand=Plus/Plus Query 344 CTTCTTCATCATTGTATGAGATGGCTACACCATCACCATCACCTCTT-TCCGGTTTACCT 402 ||||||||||||||||| | || || | | | | ||||| || || || ||||| ||| Sbjct 480 CTTCTTCATCATTGTATAATATTGC-A-A-C-T--CCATCTCC-ATTGTCTGGTTTGCCT 532 Query 403 GAGTCACATCTTGGATGGGGTCATTGGTTTACTCTGAGAGATCTTGAAATAGCAACAAAC 462 || || || ||||| ||||| || ||||||||| ||||||||||||||| |||||| ||| Sbjct 533 GAATCTCACCTTGGTTGGGGACACTGGTTTACTTTGAGAGATCTTGAAACAGCAACTAAC 592 Query 463 AGATTCTC-AAAGGAAAATGTGATTGGTGAAGGAGGATATGGAATTGTATACCGAGGAGA 521 |||||||| ||| || ||||| || |||||||| || || || |||| ||| ||||||| Sbjct 593 AGATTCTCTAAA-GAGAATGTTATAGGTGAAGGCGGTTACGGTGTTGTCTACAGAGGAGA 651 Query 522 GTTGGTCAATGGGTCTCATGTCGCCGTGAAAAAGATCCTGAACCACTTGGGACAAGCTGA 581 ||| | ||||| ||| ||| || || |||||||| || ||||| |||||||||||||| Sbjct 652 GTTAATGAATGGAACTCCTGTTGCAGTTAAAAAGATTCTTAACCAGTTGGGACAAGCTGA 711 Query 582 GAAAGAGTTTAGAGTAGAGGTTGATGCTATTGGTCATGTGCGTCACAAGAACTTGGTACG 641 |||||||||| |||| |||||||||||||| ||||||||||| |||||||||||||| || Sbjct 712 GAAAGAGTTTCGAGTCGAGGTTGATGCTATCGGTCATGTGCGGCACAAGAACTTGGTTCG 771 Query 642 GCTTCTAGGATACTGCATTGAAGGCACAAACAGGATATTGGTTTATGAGTATATGAACAA 701 |||||| || |||||||||||||||||| |||||||||||||||| || ||| |||| || Sbjct 772 GCTTCTTGGTTACTGCATTGAAGGCACACACAGGATATTGGTTTACGAATATGTGAATAA 831 Query 702 TGGGAACCTCGAAGAATGGCTTCACGGAGCAATGAAACATCACGGATATCTAACTTGGGA 761 ||| ||| | ||| |||||||||| |||||||||| ||| || ||||||||||||||||| Sbjct 832 TGGAAACTTAGAACAATGGCTTCATGGAGCAATGAGACAACATGGATATCTAACTTGGGA 891 Query 762 AGCTCGAATGAAAATTCTCACT-GGCACATCCAAGGCTCTCGCATATCTACACGAGGCAA 820 ||| | ||||| |||| | | |||||||| || ||||| |||||||| || || |||| Sbjct 892 AGCAAGGATGAAGGTTCTGA-TCGGCACATCAAAAGCTCTTGCATATCTGCATGAAGCAA 950 Query 821 TCGAACCAAAAGTAGTGCATAGAGACATCAAGTCAAGCAATAT-CTTGATCGATGATAGA 879 | || ||||||||||||||||||||||||||||||||||| || || |||| |||| || Sbjct 951 TTGAGCCAAAAGTAGTGCATAGAGACATCAAGTCAAGCAACATTCT-GATCAATGAC-GA 1008 Query 880 -TTCAACGCAAAGATTTCGGATTTTGGCCTTGCCAAGTTACTTGGAGATGGGAAAAGCCA 938 |||||||||||| |||| |||||||||||||| ||||| ||||| | ||| |||||||| Sbjct 1009 ATTCAACGCAAAGGTTTCAGATTTTGGCCTTGCTAAGTTGCTTGGTGCTGGAAAAAGCCA 1068 Query 939 TGTGACTACTCGAGTCATGGGAACATTTGGGTATGTTGCTCCTGAGTATGCGAATAC-C- 996 |||||| |||||||| ||||||||||||||||| ||||||||||| ||||| || || | Sbjct 1069 TGTGACAACTCGAGTGATGGGAACATTTGGGTACGTTGCTCCTGAATATGC-AA-ACTCA 1126 Query 997 GGACTT-TTGAATGAAAAGAGTGATGTGTACAGCTTTGGTGTC-TTGGTCTTAGAAGCAA 1054 || || || ||||||||||||||||| |||||||||||||| || |||||||||||| Sbjct 1127 GGG-TTGTTAAATGAAAAGAGTGATGTCTACAGCTTTGGTGTTGTTC-TCTTAGAAGCAA 1184 Query 1055 TAACCGGAAGAGATCCTGTGGATTACGCG-CGTCCTGCTAATGAGGTGAATCTAGTTGAG 1113 | || ||| |||| ||||||||||||| | ||||||||| |||||||||||||||| || Sbjct 1185 TCACAGGACGAGACCCTGTGGATTACG-GACGTCCTGCTCATGAGGTGAATCTAGTGGAC 1243 Query 1114 TGGTTGAAAATGATGGTAGG-ATCTAAGA-GATTAGAAGAAGTCATTG-ATCCAAACATA 1170 |||||||| |||||||| || | | |||| ||| ||| ||||| | || ||||||||||| Sbjct 1244 TGGTTGAAGATGATGGTTGGGA-C-AAGACGATCAGAGGAAGT-AGTGGATCCAAACATA 1300 Query 1171 GCGGTTAGGCCAGCGACTAGAG-CACTGAAACGAG-TACTTCTT-ACAGCACTTAGATGC 1227 | || | |||| | || || | |||||||||||| | ||| || || || || ||||| Sbjct 1301 GAAGTGAAGCCACCAACAAG-GTCACTGAAACGAGCT-CTT-TTGACGGCTCTAAGATGT 1357 Query 1228 ATTGATCCTGATTCTGAAAAGAGACCTAAAATGAGCCAAGTTGTTCGTATGCTCGAGTCT 1287 ||||||| ||||| || ||| | || || |||||||||||||| |||||||| |||||| Sbjct 1358 GTTGATCCAGATTCGGATAAGCGGCCGAAGATGAGCCAAGTTGTACGTATGCTTGAGTCT 1417 Query 1288 GAGGAATATCCCATACCAAGAGAG 1311 || ||||| ||||| ||||||||| Sbjct 1418 GAAGAATACCCCATTCCAAGAGAG 1441 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 71284773900 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5