BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312226
Length=2322
Score E
Sequences producing significant alignments: (Bits) Value
AT1G11960.1 | Symbols: | ERD (early-responsive to dehydration ... 3603 0.0
AT1G62320.1 | Symbols: | ERD (early-responsive to dehydration ... 1620 0.0
> AT1G11960.1 | Symbols: | ERD (early-responsive to dehydration
stress) family protein | chr1:4039711-4043880 REVERSE LENGTH=2660
Length=2660
Score = 3603 bits (1951), Expect = 0.0
Identities = 2209/2331 (95%), Gaps = 28/2331 (1%)
Strand=Plus/Plus
Query 1 ATGGCAACACTAGAAGATATTGGAGTAGCAGCAACAATCAACATACTCACTGCAATCATC 60
||||||||||||| ||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 185 ATGGCAACACTAGGAGATATTGGAGTAGCAGCAGCAATCAACATACTCACTGCAATCATC 244
Query 61 TTCCTTCTGGCATTTGCAATCTTGAGGATTCAACCATTCAACGATAGGGTTTATTTCCCT 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 245 TTCCTTTTGGCATTTGCAATCTTGAGGATTCAACCATTCAACGATAGGGTTTATTTCCCT 304
Query 121 AAATGGTATCTTAAAGGTATAAGAAGCAGCCCTTTGCATTCAGGTGCTCTTGTCAGCAAG 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 305 AAATGGTATCTCAAAGGTATAAGAAGCAGCCCTTTGCATTCAGGTGCTCTTGTCAGCAAG 364
Query 181 TTTGTCAATGTCAACTTAGGCTCTTACCTCCGGTTCTTGAACTGGATGCCTGCGGCTCTA 240
||||||||||| ||||||||||| |||||||||||||||||||||||||| |||||||||
Sbjct 365 TTTGTCAATGTTAACTTAGGCTCATACCTCCGGTTCTTGAACTGGATGCCCGCGGCTCTA 424
Query 241 AACATGCCCGAGCCCGAGCTTATTGACCATGCTGGATTGGATTCTGCTGTCTACTTGAGG 300
|| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 425 AAGATGCCTGAGCCTGAGCTTATTGATCATGCTGGATTGGATTCTGCTGTCTACTTGAGG 484
Query 301 ATTTACTTGATAGGGCTTAAGATCTTTGTCCCGATAGCTTTACTTGCGTGGTCGATTCTT 360
||||||||||||||||||||||||||||| |||||||| |||||||| ||||||||||||
Sbjct 485 ATTTACTTGATAGGGCTTAAGATCTTTGTACCGATAGCGTTACTTGCTTGGTCGATTCTT 544
Query 361 GTACCTGTCAATTGGACTAGTGATGGACTGCAACTAGCAAAGCTTCGTAATGTAACATCT 420
||||||||||||||||||||| |||| ||||||||||| |||||||||||||| ||||||
Sbjct 545 GTACCTGTCAATTGGACTAGTCATGGTCTGCAACTAGCTAAGCTTCGTAATGTGACATCT 604
Query 421 AGTGACATTGATAAGTTATCGATCTCAAATATCGAACGTGGATCAGACAGTTTGTACTTT 480
||||| |||||||||||||| ||||| ||||||||| ||||| || | ||
Sbjct 605 AGTGATATTGATAAGTTATCCATCTCGAATATCGAAAATGGAT----CA----G-AC--- 652
Query 481 TTAAGGTTTTGGACTCACCTTGTGATGGCTTATGCATTCACATTCTGGACTTGCTATGTT 540
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 653 ---AGGTTTTGGACTCACCTTGTGATGGCTTACGCATTCACATTCTGGACTTGCTATGTT 709
Query 541 CTAATGAAAGAGTATGAGAAAGTAGCTGCTATGCGTTTGGCATTTCTCCAGAACGAGCAA 600
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 710 CTTATGAAAGAGTATGAGAAAGTAGCTGCTATGCGTTTGGCATTTCTCCAGAACGAGCAA 769
Query 601 CGGCGCCCTGATCAGTTCACGGTTTTGGTTAGGAACGTACCAGCCGACCCAGACGAGTCC 660
|||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||
Sbjct 770 CGGCGCCCTGATCAGTTCACGGTTTTGGTTAGGAACGTACCAGCGGACCCAGATGAGTCC 829
Query 661 ATTAGTGAGAGTGTGGAACATTTCTTCCTAGTTAACCATCCGGACCATTATCTTACGCAT 720
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 830 ATTAGTGACAGTGTGGAACATTTCTTTCTAGTTAACCATCCGGACCATTATCTTACGCAT 889
Query 721 CAGGTTGTGTACAATGCAAACGATTTGGCAGCATTAGTAGAGCAGAAGAAGAGCACACAG 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 890 CAGGTTGTGTACAATGCAAACGATTTGGCAGCATTAGTAGAGCAGAAGAAGAGCACACAG 949
Query 781 AACTGGCTTGACTATTACCAATTGAAGTATACAAGGAACCAGGAACATAAGCCAAGGATA 840
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 950 AACTGGCTTGACTATTACCAATTGAAGTATACAAGGAACCAGGAACATAAGCCGAGGATA 1009
Query 841 AAGACGGGTTTTCTCGGGCTATGGGGACAGAAAGTTGACGCAATCGATCATTATATAGCT 900
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1010 AAGACGGGTTTTCTCGGGCTATGGGGAAAGAAAGTTGACGCAATCGATCATTATATAGCT 1069
Query 901 GAAATCGAGAAATTAAACGAGC-----A---A-GAGAGGAAAAAAGTAAAGAAAGATGAT 951
|||||||||||||||||||||| | | |||||||||||||| ||||||||||||
Sbjct 1070 GAAATCGAGAAATTAAACGAGCAAATAATGGAGGAGAGGAAAAAAGTGAAGAAAGATGAT 1129
Query 952 ACAAGTGTAATGCCAGCAGCTTTTGTCTCGTTTAAAACACGGTGGGGTGCTGCTGTTTGT 1011
||||||||||||||||| ||||||||||||||||||||||||||||||||||| ||| ||
Sbjct 1130 ACAAGTGTAATGCCAGCCGCTTTTGTCTCGTTTAAAACACGGTGGGGTGCTGCGGTTAGT 1189
Query 1012 GCACAGACTCAACAGTCGAGTGATCCAACCGAGTGGTTAACTGAATGGGCTCCCGAGGCA 1071
|||||||||||||||||||||||||| || || |||||||||||||||||||||||||||
Sbjct 1190 GCACAGACTCAACAGTCGAGTGATCCGACTGAATGGTTAACTGAATGGGCTCCCGAGGCA 1249
Query 1072 CGGGAAGTGTTTTGGTCGAACCTCGCAATACCTTATGTCTCTTTAACAGTAAGAAGACTT 1131
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1250 CGAGAAGTGTTTTGGTCGAACCTTGCAATACCTTATGTCTCTTTAACAGTAAGAAGACTT 1309
Query 1132 ATAATGCATATTGCATTCTTCTTCCTCACCTTCTTCTTCATGATTCCAATAGCCTTTGTT 1191
|||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1310 ATAATGCACATTGCATTCTTCTTCCTCACTTTCTTCTTCATGATTCCAATAGCCTTTGTT 1369
Query 1192 CAAACCCTTGCAAGCATCGAAGGCATTGAGAAATCCGCTCCTTTCCTTAAATCCATCATC 1251
||| ||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct 1370 CAATCCCTTGCAAGCATCGAAGGCATTGAGAAAAATGCTCCTTTCCTGAAATCCATCATC 1429
Query 1252 GAGAA-GAAGCTTGTT-AAATCGGTTATCCAAGGTTTTCTTCCGGGTATCGTGTTAAAGC 1309
||||| | | ||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct 1430 GAGAACG-ATCTT-TTCAAATCGGTTATCCAAGGTTTTCTTCCGGGTATCGTGTTAAAGC 1487
Query 1310 TCTTTCTAATATTTCTGCCAAGCATTTTGATGGTAATGTCGAAGTTCGAAGGGTTTGTAT 1369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1488 TCTTTCTAATATTTCTGCCAAGCATTTTGATGGTAATGTCGAAGTTCGAAGGGTTTGTAT 1547
Query 1370 CGTTATCATCATTAGAGAGAAGAGCAGCTTCTCGATATTATATCTTTAACCTCGTCAATG 1429
|||||||||| |||||||||||||| |||| |||||||||||||||||| ||| ||||||
Sbjct 1548 CGTTATCATCGTTAGAGAGAAGAGCGGCTTTTCGATATTATATCTTTAATCTCATCAATG 1607
Query 1430 TCTTCCTCGGAAGCATAATCGCGGGCTCTGCATTTGAACAGCTCGAGTCTTTCCTCAAAC 1489
|||||||||||||| ||||| | |||||||||||||||||||| || |||||||| ||||
Sbjct 1608 TCTTCCTCGGAAGCGTAATCACCGGCTCTGCATTTGAACAGCTTGATTCTTTCCTAAAAC 1667
Query 1490 AATCTGCAAAGGAGATTCCTAAGACGGTTGGAGTAGCGATACCGATAAAAGCAACGTTTT 1549
|||| |||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1668 AATCCGCAAAGGAGATTCCTAAGACGGTTGGGGTAGCGATACCGATAAAAGCAACGTTTT 1727
Query 1550 TTATCACATATATAATGGTGGACGGTTGGGCGGGTATTGCAGGAGAGATTCTGAGGCTGA 1609
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||
Sbjct 1728 TTATCACATATATAATGGTGGACGGTTGGGCTGGTATTGCAGGGGAGATTCTGAGGCTGA 1787
Query 1610 AACCTCTTATCTTTTTCCATATAAAGAACTTCTTATTGGTGAAAACCGAAAAGGATAGGG 1669
|||||||||||||||||||||||||||||| ||||||||||||||||||||||||||| |
Sbjct 1788 AACCTCTTATCTTTTTCCATATAAAGAACTCCTTATTGGTGAAAACCGAAAAGGATAGAG 1847
Query 1670 AAGAAGCAATGAACCCGGGACAGATCAATTACCATGCGACAGAGCCTCGGATTCAACTCT 1729
||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1848 AAGAAGCAATGAACCCGGGACAGATCAATTATCATGCGACAGAGCCTCGGATTCAACTCT 1907
Query 1730 ACTTCCTCCTCGGTCTTGTCTACGCCCCTGTGACTCCAGTTCTACTCCCTTTCATTATAA 1789
||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |
Sbjct 1908 ACTTCCTCCTCGGTCTTGTCTACGCTCCTGTGACTCCAGTTCTACTCCCTTTCATTATCA 1967
Query 1790 TCTTCTTTGCATTGGCTTACCTTGTCTTTCGTCATCAGATCATAAATGTGTATAATCAGG 1849
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1968 TCTTCTTCGCATTGGCTTACCTTGTCTTTCGTCATCAGATCATAAATGTGTATAATCAGG 2027
Query 1850 AATACGAAAGCGCGGCTAGGTTCTGGCCAGATGTTCATGGACGTATAATATCAGCATTGA 1909
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 2028 AATATGAAAGCGCGGCTAGGTTCTGGCCAGATGTTCATGGTCGTATAATATCAGCATTGA 2087
Query 1910 TCATCTCGCAAATCCTTTTGATGGGACTACTGAGCACTAAGGGAGCAGCTCAATCCACGC 1969
||||| | ||||||||||||||||||||| | |||||||||||||| ||||| |||||||
Sbjct 2088 TCATCGCACAAATCCTTTTGATGGGACTATTAAGCACTAAGGGAGCTGCTCAGTCCACGC 2147
Query 1970 CTTTCCTCCTCGTCTTACCGATCCTAACCTTTTTCTTCCACCGGTTCTGCAAAGGCCGGT 2029
||||||| ||| ||||||||||| ||||||||||||||||||||| ||||||||||||||
Sbjct 2148 CTTTCCTACTCTTCTTACCGATCATAACCTTTTTCTTCCACCGGTACTGCAAAGGCCGGT 2207
Query 2030 ATGAACCAGCATTCCTCCGTCACCCCTTGAAGGAAGCTATGGTTAAAGATACATTGGAAC 2089
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 2208 ATGAACCAGCATTCCTCCGTCACCCCTTGAAGGAAGCTATGGTCAAAGATACATTGGAAC 2267
Query 2090 GAGCAAGAGAACCCAACTTTAATCTGAAACCGTATCTTCAGAAAGCATATATTCATCCGG 2149
|||||||||||||||| ||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 2268 GAGCAAGAGAACCCAATTTTAATCTGAAACCGTATCTTCAAAAAGCATACATTCATCCGG 2327
Query 2150 TTTTCAAAGACAACGACTATGAAGATAGCCGGTTTGATGAAATATCCGGTTATTGCATCG 2209
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2328 TTTTCAAAGACAACGACTATGAAGATAGCCGGTTTGATGAAATATCCGGTTATTGCATCG 2387
Query 2210 AAGATTCGGATGATGAGTGTGTTACTGTGCCGACTAAACGTCAGTCCCGGATAAATACAC 2269
||||||||||||| |||||||||||||| ||||| ||||||||||||||||||||||| |
Sbjct 2388 AAGATTCGGATGAAGAGTGTGTTACTGTACCGACCAAACGTCAGTCCCGGATAAATACGC 2447
Query 2270 CGGCGGTTAGCCATGCTAGCCGCGGTTCTTCGCGTTCACCTCCGTCAAAGT 2320
| || ||||||||||| ||||||||||||||||||||||| || |||||||
Sbjct 2448 CTGCTGTTAGCCATGCAAGCCGCGGTTCTTCGCGTTCACCACCCTCAAAGT 2498
> AT1G62320.1 | Symbols: | ERD (early-responsive to dehydration
stress) family protein | chr1:23041668-23044855 REVERSE LENGTH=2310
Length=2310
Score = 1620 bits (877), Expect = 0.0
Identities = 1774/2196 (81%), Gaps = 105/2196 (5%)
Strand=Plus/Plus
Query 1 ATGGCAACACTAGAAGATATTGGAGTAGCAGCAACAATCAACATACTCACTGCAATCATC 60
||||| ||| ||| |||||||||| |||||||| | || || || || | |||| | ||
Sbjct 1 ATGGCGACATTAGCAGATATTGGACTAGCAGCAGCGATTAATATTCTAAGTGCATTGATA 60
Query 61 TTCCTTCTGGC-ATTTGCAATCTTGAGGATTCAACCATTCAACGATAGGGTTTATTTCCC 119
|| | | | || |||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 61 TTTC-TATTGCTATTTGCAATCTTGAGGATTCAACCATTCAATGATAGGGTTTATTTCCC 119
Query 120 TAAATGGTATCTTAAA-GGTATAAGAAGCAGCCCTTTGCATTCAGGTGCTCTT-GTCAGC 177
||||||||| |||||| ||| | |||||||||||| || |||| |||||| || || |||
Sbjct 120 TAAATGGTA-CTTAAAAGGTGTTAGAAGCAGCCCTGTGAATTCGGGTGCT-TTCGTTAGC 177
Query 178 AAGTTTGTCAATGTCAACTTAGGCTCTTACCTCCGGTTCTTGAACTGGATGCCTGCGGCT 237
||| || | ||| | |||| | || ||| | ||||| || ||||||||||||| |||
Sbjct 178 AAGATTATGAATTTGGACTTTCGATCATACGTTCGGTTTTTAAACTGGATGCCTGATGCT 237
Query 238 CTAAACATGCCCGAGCCCGAGCTTATTGACCATGCTGGATTGGATTCTGCTGTCTACTTG 297
|| || ||||| ||||| || |||||||| |||||||| |||||||||||||| ||||||
Sbjct 238 CTTAAGATGCCAGAGCCTGAACTTATTGATCATGCTGGTTTGGATTCTGCTGTTTACTTG 297
Query 298 AGGATTTACTTGATAGGGCTTAAGATCTTTG-TCCCGATAGCTTTACTTGCGTGGTCGAT 356
|||||||||||||| |||||||||||||||| ||| ||| || |||||| | ||||| ||
Sbjct 298 AGGATTTACTTGATTGGGCTTAAGATCTTTGGTCC-GATTGCATTACTTTCATGGTCAAT 356
Query 357 TCTT-GTACCTGTCAATTGGACTAGTGATGGACTGCAACTAGCAAAGCTTCGTAATGTAA 415
| || |||||||| |||||||| ||||||||| |||| |||||||| |||||||||||||
Sbjct 357 T-TTAGTACCTGTAAATTGGACAAGTGATGGATTGCAGCTAGCAAAACTTCGTAATGTAA 415
Query 416 CATCTAGTGACATTGATAAG-TTATCGATCTCAAATATCGAACGTGGATCAGACAGTTTG 474
|||| ||| | || |||||| || ||||| || ||| ||||||||||||||||||| |
Sbjct 416 CATCGAGTAATATCGATAAGCTT-TCGATTTCGAATGTCGAACGTGGATCAGACAG---G 471
Query 475 TACTTTTTAAGGTTTTGGACTCACCTTGTGATGGCTTATGCATTCACATTCTGGACTTGC 534
| ||| || | || | |||||||||||||||||||||||||| |||||||||
Sbjct 472 T--TTT----GG----GCAC--ATCTTGTGATGGCTTATGCATTCACATTTTGGACTTGC 519
Query 535 TATGTTCTAATGAAAGAGTATGAGAAAGTAGCTGCTATGCGTTTGGCATTTCTCCAGAAC 594
||||| |||||||| || ||||||||| | ||||| ||||| || | |||||||| | |
Sbjct 520 TATGTACTAATGAAGGAATATGAGAAAATTGCTGCAATGCGGTTATCTTTTCTCCA-ATC 578
Query 595 -GAGCAA-CGGCGCCCTGATCAGTTCACGGTTTTGGTTAGGAACGTACCAGCCG-ACCCA 651
||| || || || ||||||| ||||| ||| ||||||||||||||||| ||| || ||
Sbjct 579 AGAG-AAGCGACGTGCTGATCAATTCACTGTTCTGGTTAGGAACGTACCA-CCGGACTCA 636
Query 652 GACGAGTCCATTAGTGAGAGTGTGGAACATTTCTTCCTAGTTAACCATCCGGACCATTAT 711
|||||||| ||||| || | ||| | |||||||| || |||||||| || |||||||||
Sbjct 637 GACGAGTCGATTAGCGAAAACGTGCAGCATTTCTTTCTTGTTAACCACCCAGACCATTAT 696
Query 712 CTTACGCATCAGGTTGTGTACAATGCAAACGATTTGGC-AGCATTAGTAGA-GCAGAAGA 769
||||| |||||||| |||||||||||||| || ||||| | ||| ||||| | | ||||
Sbjct 697 CTTACACATCAGGTGGTGTACAATGCAAATGAATTGGCTAA-ATTGGTAGAAG-ACAAGA 754
Query 770 AGAGCACACAGAACTGGCTT-GACTATTACCAATTGAAGTATACAAGGAACCAGGAACAT 828
||| | ||||| ||| || || || ||||| |||||||||||||| ||| |||||||
Sbjct 755 AGAAAATGCAGAATTGG-TTAGATTACTACCAGTTGAAGTATACAAGAAACAAGGAACA- 812
Query 829 AAG-CCAAGGATAAAGACGGGTTTTCTCGGGCTATGGGGACAGAAA-GTTGACGCAATCG 886
| | ||| |||| | || ||| |||||||||||||| || ||| || || ||||| |
Sbjct 813 ACGGCCACGGAT---G--GGATTT-CTCGGGCTATGGGG-CAAAAAAGTAGATGCAATGG 865
Query 887 ATCATTATATAGCTGAAATCGAGAAA-TTAAACGAGCAAG-A--G-AGGAAA--AA-AG- 937
||||||||| ||| || ||||||||| ||| ||||||| | | | |||| || ||
Sbjct 866 ATCATTATACAGCAGAGATCGAGAAACTTAG-CGAGCAAATAATGGAAGAAAGGAAGAGG 924
Query 938 -TAAAGAAAGATGATACAAGTGTAATGCCAGCAGCTTTTGTCTCGTTTAAAACACGGTGG 996
||||||||||||| | ||||||||||| |||||||||||| || |||||||| || |||
Sbjct 925 ATAAAGAAAGATGACAAAAGTGTAATGCAAGCAGCTTTTGTGTCTTTTAAAACGCGTTGG 984
Query 997 GGTGCTGCTGTTTGTGCACAGACTCAACAGTCGAGTGA-TCCAACCGAGTGGTTAACTGA 1055
|| ||||| || || || ||||| |||||| ||| || |||||| || |||||||| ||
Sbjct 985 GGCGCTGCGGTCTGCGCGCAGACACAACAGACGAA-GAATCCAACTGAATGGTTAACCGA 1043
Query 1056 ATGGGCTCCCGAGGCACGGGAAGTGTTTTGGTCGAACCTCGCAATACCTTATGTCTCTTT 1115
||||||||| |||||| | ||| ||| ||| | || |||||||| ||||| || ||| |
Sbjct 1044 ATGGGCTCCTGAGGCAAGAGAAATGTACTGGCCAAATCTCGCAATGCCTTACGTATCTCT 1103
Query 1116 AACAGTAAGAAGACTTATAATGCATATTGCATTCTTCTTCCTCACCTTCTTCTTCATGAT 1175
|| ||||| ||| || ||||||| || || |||||||||||||| ||||| ||||| ||
Sbjct 1104 CACTGTAAGGAGATTTGTAATGCACATCGCCTTCTTCTTCCTCACGTTCTTTTTCATCAT 1163
Query 1176 TCCAATAGCCTTTGTTCAAACCCTT-GCAAGCATCGAAGGCATTGAGAAATCCGCTCCTT 1234
||||| || ||||| ||| || || || || || ||||| || |||||||||||||| |
Sbjct 1164 CCCAATCGCATTTGTGCAATCC-TTAGCGAGTATTGAAGGTATCGAGAAATCCGCTCCGT 1222
Query 1235 TCCTTAAATCC-ATCATCGAGAAGAAGCTTGTT-AAATCGGTT-ATCCAAGGTTTTCTTC 1291
|||| | ||| || || | || ||| || | ||||| || ||||||||||||||||
Sbjct 1223 TCCTCAG-TCCCATTGTCAAAAACAAG-TTAATGAAATCA-TTGATCCAAGGTTTTCTTC 1279
Query 1292 CGGGTATCGTGTTAAAGCTCTTTCTAATATTTCTGCCAAGCATT-TTGATGGTAATGTCG 1350
| ||||| || || ||||||||| | ||||| ||||||| || | |||||| | ||||||
Sbjct 1280 CCGGTATTGTCTTGAAGCTCTTTTTGATATTCCTGCCAA-CAATATTGATGATCATGTCG 1338
Query 1351 AAGTTCGAAGGGTTTGTATCGTTATCATCATTAGAGAGAAGAGCAGCTTCTCGATATTAT 1410
|| |||||||||||| | || ||||||| |||||||||||||| |||| |||||| |||
Sbjct 1339 AAATTCGAAGGGTTTATTTCAATATCATCGTTAGAGAGAAGAGCGGCTTTTCGATACTAT 1398
Query 1411 ATCTTT-AACCTCGTCAATGTCTTCCTCGGAAGCATAATCGCGGGCTCTGCATTTGAACA 1469
|| ||| ||||| || ||||| |||||||| ||| ||||| | || ||||| ||||||||
Sbjct 1399 AT-TTTCAACCTTGTGAATGTTTTCCTCGGTAGCGTAATCACTGGATCTGCTTTTGAACA 1457
Query 1470 GCTCGAGTCTTTCCTCAAACAATCTGCAAAGGAGATTCCTAAGACGGTTGGAGTAGCGAT 1529
|||||| ||||| || |||||||| ||||| || ||||| ||| |||||||| |||||
Sbjct 1458 GCTCGATTCTTTTCTTAAACAATCCGCAAACGACATTCCGCGGACAGTTGGAGTCGCGAT 1517
Query 1530 ACCGATAAAAGCAACGTTTTTTATCACATATATAATGGTGGACGGTTGGGCGGGTATTGC 1589
|||||||||||||||||| ||||| || ||||||||||| ||||||||||||||| | ||
Sbjct 1518 ACCGATAAAAGCAACGTTCTTTATAACGTATATAATGGTAGACGGTTGGGCGGGTGTGGC 1577
Query 1590 AGGAGAGAT-TCTGAGGCTGAAACCTCTTA-TCTTTTTCCATATAAAGAACTTCTTATTG 1647
||||| || | | ||||||||||| ||| || |||||||| ||||||||||||| ||
Sbjct 1578 GGGAGAAATCTTT-AGGCTGAAACCA-TTAGTCATTTTCCATTTAAAGAACTTCTTCTTT 1635
Query 1648 GTGAAAACCGAAAAGGATAGGGAAGAAGCAATGAACCCGGGACAGATCAATTACCATGCG 1707
|||||||| ||||||||||| |||||||| ||| | ||||||||||| ||| | | ||
Sbjct 1636 GTGAAAACTGAAAAGGATAGAGAAGAAGCTATGGATCCGGGACAGATTGATTTCTACGCT 1695
Query 1708 ACAGAGCCTCGGATTCAACTCTACTTCCTCCTCGGTCTTGTCTACGCCCCTGTGACTCCA 1767
|| ||||||||||||||||| ||||||||||| || ||||||||||| ||||| |||||
Sbjct 1696 ACCGAGCCTCGGATTCAACTATACTTCCTCCTTGGCCTTGTCTACGCTCCTGTCACTCCT 1755
Query 1768 GTTCTACTCCCTTTCATTATAATCTTCTTTGCATTGGCTTACCTTGTCTTTCGTCATCAG 1827
||||| || |||||||| || ||||||||| || || ||||| ||||| |||||||||
Sbjct 1756 GTTCTTCTTCCTTTCATCATCTTCTTCTTTGGTTTCGCCTACCTCGTCTTCCGTCATCAG 1815
Query 1828 ATCATAAATGTGTATAATCAGGAATACGAAAGCGCGGCTAGGTTCTGGCCAGATGTTCAT 1887
| | || || | || | || | | | | | ||||||||||| ||||||
Sbjct 1816 A--A-----GT--ATGAG-AG---TGCG---G-GTG-C-A--TTCTGGCCAGACGTTCAT 1854
Query 1888 GGACGTATAATATCAGCATTGATCATCTCGCAAATCCTTTTGATGGGACTACTGAGCACT 1947
|||||||||||||| |||||||||||||| |||||||||||| ||||| || |||||||
Sbjct 1855 GGACGTATAATATCGGCATTGATCATCTCACAAATCCTTTTGTTGGGATTAATGAGCACG 1914
Query 1948 AAGGGAGCAGCTCAATCCACGCCTTTCCTCCTCGT-CTTACCGATCCTAACCTTT--TTC 2004
|| ||| || ||| ||||| |||||||||||||| || | |||| || ||||| ||
Sbjct 1915 AAAGGAAAAGTTCAGTCCACACCTTTCCTCCTCGTTCT-AGCGATTCTCACCTTCGGTT- 1972
Query 2005 TTCCACCGGTTCTGCAAAGGCCGGTATGAACCAGCATTCCTCCGTCACCCCTTGAAGGAA 2064
||| | ||||| |||||||||||||| ||| | |||||| || | |||| ||| |||||
Sbjct 1973 TTC-ATCGGTTTTGCAAAGGCCGGTACGAATCGGCATTCGTCATTAACCCGTTGCAGGAA 2031
Query 2065 GCTATGGTTAAAGATACATTGGAACGAGCAAGAGAACCCAACTTTAATCTGAAACCGTAT 2124
|||||| |||| |||||||||||||||||||||||||| ||||| ||||| ||| || |
Sbjct 2032 GCTATGATTAAGGATACATTGGAACGAGCAAGAGAACCAAACTTGAATCTTAAAGGGTTT 2091
Query 2125 CTTCAGAAAGCATATATTCATCCGGTTTTCAAAGAC 2160
|||||||| |||||| ||||||| ||||| ||||||
Sbjct 2092 CTTCAGAATGCATATGTTCATCCTGTTTTTAAAGAC 2127
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 115260451320
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5