BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312255
Length=5142
Score E
Sequences producing significant alignments: (Bits) Value
AT1G12290.1 | Symbols: | Disease resistance protein (CC-NBS-LR... 3618 0.0
AT1G12280.1 | Symbols: | LRR and NB-ARC domains-containing dis... 2538 0.0
AT4G10780.1 | Symbols: | LRR and NB-ARC domains-containing dis... 856 0.0
AT1G12220.1 | Symbols: RPS5 | Disease resistance protein (CC-NB... 774 0.0
AT4G14610.1 | Symbols: | pseudogene, disease resistance protei... 695 0.0
AT1G12210.1 | Symbols: RFL1 | RPS5-like 1 | chr1:4140948-414360... 641 0.0
> AT1G12290.1 | Symbols: | Disease resistance protein (CC-NBS-LRR
class) family | chr1:4178359-4181247 REVERSE LENGTH=2889
Length=2889
Score = 3618 bits (1959), Expect = 0.0
Identities = 2335/2517 (93%), Gaps = 23/2517 (1%)
Strand=Plus/Plus
Query 1 ATGGAAGATCTCAAGGCAGT-ACGAGCTGATCTGTTACGTAAGGTGCAGACAGCAGAAGA 59
|||||||||||||||||| | | ||| ||||||| |||||||||||||||||||||||||
Sbjct 127 ATGGAAGATCTCAAGGCATTGA-GAGATGATCTGCTACGTAAGGTGCAGACAGCAGAAGA 185
Query 60 GGGAGGTCTACAAAGGCTTCATCAAATCAAGGTATGGCTTAAGAGAGTCAAGACTATCGA 119
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 186 AGGAGGTCTACAAAGGCTTCATCAAATCAAGGTATGGCTTAAGAGAGTCAAGACTATCGA 245
Query 120 ATCCCAATTCAATGATCT-GTATAGTAGTAGAACTGTTGAACTTCAAAGGTTGTGTTTTT 178
|||||||||||||||||| | |||||||||||||||||||||||||||||||||||| ||
Sbjct 246 ATCCCAATTCAATGATCTAG-ATAGTAGTAGAACTGTTGAACTTCAAAGGTTGTGTTGTT 304
Query 179 ATGGTGCTGGCTCGAGAAACTTAAGATTGAGGTATGACTATGGAAGAAGGGTCTTCTTGA 238
||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 305 GTGGTGTTGGCTCGAGAAACTTAAGATTGAGCTATGACTATGGAAGAAGGGTCTTCTTGA 364
Query 239 TGTTGAATATGGTTGAAGACTTAAAATCTAAAGGGGGTTTTGAAGAGGTGGCTCATCCAG 298
|||||||||| |||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 365 TGTTGAATATAGTTGAAGACTTAAAATCTAAAGGGATTTTTGAAGAGGTGGCTCATCCAG 424
Query 299 CTACGAGAGCTGTGGGGGAGGAAAGGCCTCTACAACCGACGATTGTTGGTCTGGAAACAA 358
||||||||||||||||||||||||||||||||||||| ||||||||||||| ||||||||
Sbjct 425 CTACGAGAGCTGTGGGGGAGGAAAGGCCTCTACAACCAACGATTGTTGGTCAGGAAACAA 484
Query 359 TTCTCGAAAAGGCATGGAACCACCTCATGGATGATGGAACTAAGATTATGGGTCTCTATG 418
|| | |||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 485 TTTTAGAAAAGGCATGGGACCACCTCATGGATGATGGAACTAAGATTATGGGTCTCTATG 544
Query 419 GCATGGGTGGAGTAGGAAAAACAACTCTTCTCACTCGGATCAACAATAGGTTTTGTGACA 478
||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct 545 GCATGGGTGGAGTAGGAAAAACAACCCTTCTCACTCAGATCAACAATAGGTTTTGTGACA 604
Query 479 CTAATGATGGCGTTGAAATCGTCATTTGGGTTGTGGTGTCTGGTGATCTACAAATCCACA 538
| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||
Sbjct 605 CCGATGATGGCGTTGAAATTGTCATTTGGGTTGTGGTATCTGGTGATCTACAAATCCACA 664
Query 539 AGATACAAAAAGAGATTGGCGAGAAAATAGGATTTGA-AGGCGTGGAATGGAACCAGAAA 597
|||||||||||||||||||||| |||||||||||| | ||||||||||||||||||||||
Sbjct 665 AGATACAAAAAGAGATTGGCGAAAAAATAGGATTT-ATAGGCGTGGAATGGAACCAGAAA 723
Query 598 AGTGAAAACCAGAAGGCAGTCGACATACTCAATTTTCTGAGCAAAAAGAGATTTGTGTTG 657
||||||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||
Sbjct 724 AGTGAAAACCAAAAGGCAGTCGATATACTCAATTTTCTAAGCAAAAAGAGATTTGTGTTG 783
Query 658 CTTTTGGATGACATTTGGAGGAGAGTGGAATTAACCGAGATTGGAATTCCGAATCCAACA 717
|||||||||||||| |||| ||| |||||| |||| ||||||||||| ||||||||||||
Sbjct 784 CTTTTGGATGACATATGGAAGAGGGTGGAACTAACTGAGATTGGAATCCCGAATCCAACA 843
Query 718 AGTGAGAACGGATGCAAAATAGCATTCACCACTCGCTCTCAAAGCGTATGTGCGAGCATG 777
||||| ||||||||||||||||||||||||||||||| |||||| || ||||||||||||
Sbjct 844 AGTGAAAACGGATGCAAAATAGCATTCACCACTCGCTGTCAAAGTGTTTGTGCGAGCATG 903
Query 778 GGGGTTCATGATCCGATGGAAGTCCGATGTTTAGGTACAGATGATGCGTGGGATTTGTTC 837
|| ||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||
Sbjct 904 GGAGTTCATGATCCGATGGAAGTCCGGTGTTTAGGTGCAGATGATGCGTGGGATTTGTTC 963
Query 838 A-GaaaaaaaGTAGGACA-ACCCACACTA-GAAAGCCACCCGGACATTCCCGAAATTGCA 894
| ||||||| || ||| | | | ||| || | | ||||||| |||||||||||||| |||
Sbjct 964 AAGAAAAAA-GTTGGAGATATC-ACATTAAGCA-GCCACCCTGACATTCCCGAAATCGCA 1020
Query 895 AGAAAAGTTGCTCGAGCATGTTGTGGCTTGCCACTAGCGCTAAACGTTATTGGAGAGACA 954
||||||||||||| |||||||||||| ||||| |||||||||||||| ||||||||||||
Sbjct 1021 AGAAAAGTTGCTCAAGCATGTTGTGGTTTGCCGCTAGCGCTAAACGTCATTGGAGAGACA 1080
Query 955 ATGGCATGCAAGAAGACTACACAAGAATGGGATCATGCATTAGACGTTTTAACAACATAT 1014
|||||||| |||||||| || ||||||||||||| |||| |||| || | ||||||||||
Sbjct 1081 ATGGCATGTAAGAAGACAACGCAAGAATGGGATCGTGCAGTAGATGTCTCAACAACATAT 1140
Query 1015 GCTGCAAATTTTGGTGCTGTGAAGGAGAAGATTCTTCCTATTTTGAAGTACAGCTATGAT 1074
|||||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||
Sbjct 1141 GCTGCAAATTTTGGTGCTGTAAAGGAGAGGATTCTTCCTATTTTGAAGTACAGCTATGAT 1200
Query 1075 AATCTAGAAAGTGACAGTGTCAAATCTTGTTTCCAATATTGTTCTCTGTTTCCTGAAGAC 1134
||||| |||||||| ||||| ||| ||||||||| |||||| ||||||||||| |||||
Sbjct 1201 AATCTGGAAAGTGAGAGTGTTAAAACTTGTTTCCTATATTGCTCTCTGTTTCCCGAAGAT 1260
Query 1135 GCGTTAATAGAAAAAGAGAGGCTGATAGATTATTGGATATGCGAGGGATTCATTGATGGA 1194
| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1261 GATTTAATAGAAAAAGAGAGGCTGATAGATTATTGGATATGCGAGGGATTCATTGATGGA 1320
Query 1195 TATGAAAATAAAAAAGGAGCTGTGGACCAAGGCTATGAGATACTTGGTACTCTTGTTCGT 1254
||||||||||||||||||| |||| |||||||||||||||| |||||||||||| ||
Sbjct 1321 GATGAAAATAAAAAAGGAGCGGTGGGTGAAGGCTATGAGATACTCGGTACTCTTGTTTGT 1380
Query 1255 GCCTCTTTGTTGGTGGAGGGAGGAAAGTTCAACAATAAGTCATATGTGAAAATGCATGAT 1314
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1381 GCCTCTTTGTTGGTGGAGGGAGGAAAGTTCAACAATAAGTCATATGTGAAAATGCATGAT 1440
Query 1315 GTGGTTCGTGAGATGGCCCTGTGGATAGCATCTGACCTCAGGAAGCATATAGGTAATTGC 1374
||||| |||||||||||||||||||||||||||||||| |||||||||| || ||||||
Sbjct 1441 GTGGTACGTGAGATGGCCCTGTGGATAGCATCTGACCTAAGGAAGCATAAAGATAATTGT 1500
Query 1375 ATTGTACGAGCCGGTTTTGGGTTAAACGAAATACCAAGGGAT-AAGGATTGGAAAGTTGT 1433
||||| |||||||||||| |||||||||||||||||| || | |||||||||||||||||
Sbjct 1501 ATTGTTCGAGCCGGTTTTAGGTTAAACGAAATACCAAAGG-TCAAGGATTGGAAAGTTGT 1559
Query 1434 GAGAAGGATGTCATTGGTGAATAACAGGATTAAAGAGATACATGGCAGTCCCGAGTGTCC 1493
||| ||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1560 GAGTAGGATGTCACTGGTGAATAACAGGATTAAAGAGATACATGGCAGTCCTGAGTGTCC 1619
Query 1494 TAAACTTACAACTTTGTTCCTTCAGGATAACCGCCATCTGGTAAATATCTCCGGGGAATT 1553
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 1620 TAAACTTACAACTTTGTTCCTGCAGGATAACCGCCATCTGGTAAATATCTCCGGGGAATT 1679
Query 1554 CTTCAGGTCTATGCCGAGGCTAGTTGTTTTGGATCTATCATGGAATATCAATCTCAGTGG 1613
||||||||||||||| |||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1680 CTTCAGGTCTATGCCAAGGCTAGTTGTTTTGGATCTATCATGGAATGTCAATCTCAGTGG 1739
Query 1614 GTTGCCAGAGCAAATATCAGAGTTGGTTTCATTGCGATATCTTGACTTGTCAGATTCAAG 1673
||| || || ||||||||||||||||||||||| |||||||||||||||||| |||| ||
Sbjct 1740 GTTACCGGATCAAATATCAGAGTTGGTTTCATTACGATATCTTGACTTGTCATATTCGAG 1799
Query 1674 CATAGTGAGATTGCCAGTTGGTTTACGGAAGCTGAAAAAGCTGATGCATCTGAATCTAGA 1733
||||| ||||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct 1800 CATAGGGAGATTGCCAGTTGGTTTATTAAAGTTGAAAAAGCTGATGCATCTGAATCTAGA 1859
Query 1734 GTCTATGTTGTGCCTTGAGAGTGTTTCAGGGAT--ATCGCATTTGTCGAA-CTTGAAGAC 1790
||| ||||||||||||||||||||||||||||| ||| |||||||||| || ||||||
Sbjct 1860 GTCAATGTTGTGCCTTGAGAGTGTTTCAGGGATTGATC--ATTTGTCGAATCT-GAAGAC 1916
Query 1791 TTTGAGGCTATTAAATTTCAGAATGTGGCTAACTATAAGCTTATTGGAGGAGCTGGAACG 1850
|||||||| ||||||| |||||||||||||||||||||||| ||||||||||||||||
Sbjct 1917 GGTGAGGCTACTAAATTTAAGAATGTGGCTAACTATAAGCTTACTGGAGGAGCTGGAACG 1976
Query 1851 TTTGGAGAATTTAGAAGTTCTAACCATAGAGATCACGTCAAGTCCAGCATTGGAACAACT 1910
||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 1977 TTTGGAGAATTTAGAAGTTCTAACCATAGAGATCATATCAAGTTCAGCATTGGAACAACT 2036
Query 1911 GTTATGCTCTCACAGGTTGGTGAGATGTCTTCAAAAGGTATCTATAAAATACATTGACGA 1970
||||||||||||||||||||||||||||||||||||||||||| | |||||| | |||||
Sbjct 2037 GTTATGCTCTCACAGGTTGGTGAGATGTCTTCAAAAGGTATCTGTTAAATACCTCGACGA 2096
Query 1971 AGAATCAGTCAGAATATTGACGTTGCCATCTATAGGTGATCTCCGTGAAGTCTTCATAGG 2030
||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct 2097 AGAATCAGTCAGAATATTGACTTTGCCATCTATAGGTGATCTCCGGGAAGTCTTCATAGG 2156
Query 2031 GGGATGTGGGATACGGGATATAATTATAGAAGGGAACACAAGTGTGACAAGCACATGCTT 2090
||||||||| || |||||||||||||||||| ||||||||||| |||||||| |||||||
Sbjct 2157 GGGATGTGGAATGCGGGATATAATTATAGAAAGGAACACAAGTCTGACAAGCCCATGCTT 2216
Query 2091 TCGAAATCTATCCAAAGTTCTGATAGCTGGTTGCAATGGTCTTAAAGATTTGACGTGGTT 2150
|| |||||||||||||||| ||||| ||||||||||||||||||| ||||||||||||||
Sbjct 2217 TCCAAATCTATCCAAAGTTTTGATAACTGGTTGCAATGGTCTTAAGGATTTGACGTGGTT 2276
Query 2151 GTTGTTTGCTCCTAACCTCACTCATCTCAATGTTTGGAACTCAAGCGAAGTAGAAGAGAT 2210
||||||||||||||||||||||||||||||||||||||||||| || || ||||||| ||
Sbjct 2277 GTTGTTTGCTCCTAACCTCACTCATCTCAATGTTTGGAACTCACGCCAAATAGAAGAAAT 2336
Query 2211 AATAAGCCAAGAGAAAGCTTCAAGGGCTGATATAGTTCCTTTTCGGAAACTAGAATATCT 2270
||||||||||||||||||||| | |||||||| ||||||||||||||||||||||||||
Sbjct 2337 AATAAGCCAAGAGAAAGCTTCCACAGCTGATATTGTTCCTTTTCGGAAACTAGAATATCT 2396
Query 2271 ACACTTGTGGGATTTACCAGAACTGAAGAGCATATACTGGGGTCCTTTACCGTTTCCATG 2330
||||||||||||||||| ||||||||||||||||| ||| |||||| || ||||||||
Sbjct 2397 GCACTTGTGGGATTTACCTGAACTGAAGAGCATATATTGGAATCCTTTGCCTTTTCCATG 2456
Query 2331 TCTGAATCAGATCAACGTACAAAACAATTGTCAAAAGCTGAGAAAGCTTCCATTGGATTC 2390
||||||||||||||| |||||||| || |||| |||||||| ||||||||||||||||||
Sbjct 2457 TCTGAATCAGATCAATGTACAAAATAAGTGTCGAAAGCTGACAAAGCTTCCATTGGATTC 2516
Query 2391 TAAAAGTTGCATTG---CGGGTGAAGAACTCGTCATACAATACGGAGATGAAGAATGGAA 2447
| |||||||||||| ||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 2517 TCAAAGTTGCATTGTGGCGGGTGAAGAACTTGTCATACAATATGGAGATGAAGAATGGAA 2576
Query 2448 AGAAAAAGTTGAATGGGAGGATAAAGCCACAAGACTCCGGTTCTTGCCATCCTGCAA 2504
|||| || || |||||||| ||||||||||||||||| ||||| || || |||||
Sbjct 2577 GGAAAGGGTCGAGTGGGAGGACAAAGCCACAAGACTCCGTTTCTTACCGTCATGCAA 2633
> AT1G12280.1 | Symbols: | LRR and NB-ARC domains-containing disease
resistance protein | chr1:4174875-4177559 REVERSE LENGTH=2685
Length=2685
Score = 2538 bits (1374), Expect = 0.0
Identities = 1534/1611 (95%), Gaps = 12/1611 (1%)
Strand=Plus/Plus
Query 3538 ACCATGGCATGCAAAAGGATGGTACAAGAATGGCGTAATGCAATTGACGTTTTGAGCTCA 3597
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1081 ACCATGGCATGCAAAAGGATGGTACAAGAATGGCGTAACGCAATTGACGTTTTGAGCTCA 1140
Query 3598 TATGCTGCAGAATTTCCTGGCATGGAACAAATTCTTCCAATTCTAAAGTATAGCTATGAT 3657
|||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 1141 TATGCTGCAGAATTCCCTGGTATGGAACAAATTCTTCCTATTCTAAAGTATAGCTATGAT 1200
Query 3658 AATTTAATCAAGGAGCAGGTGAAACCATGTTTCCTATATTGCTCTCTGTTTCCTGAAGAT 3717
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1201 AATTTAAACAAGGAGCAGGTGAAACCATGTTTCCTATATTGCTCTCTGTTTCCTGAAGAT 1260
Query 3718 TATCGTATGGAGAAAGAGAGGTTGATAGACTATTGGATATGTGAGGGATTCATTGATGAA 3777
||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1261 TATCGTATGGAAAAAGAGAGGTTGATAGACTATTGGATATGTGAGGGATTCATAGATGAA 1320
Query 3778 AATGAAAGTAGAGAAAGAGCATTAAGCCAAGGTTATGAAATCATTGGTATCCTTGTCCGA 3837
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 1321 AATGAAAGTAGAGAAAGAGCATTAAGCCAAGGTTATGAGATCATTGGTATCCTTGTCCGA 1380
Query 3838 GCTTGTTTGTTGTTGGAGGAAGCAATCAATAAAGAACAAGTTAAAATGCATGATGTGGTT 3897
|| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 1381 GCATGTTTGTTGTTGGAGGAAGCTATCAATAAAGAACAAGTTAAAATGCATGATGTGGTT 1440
Query 3898 CGGGAGATGGCTCTATGGATAGCATCTGATC-TCGGGAAGCATAAAGAAAGATGTATTGT 3956
|||||||||||||||||||| |||||||||| | ||||| ||||||||||||||||||||
Sbjct 1441 CGGGAGATGGCTCTATGGATTGCATCTGATCTTGGGGAA-CATAAAGAAAGATGTATTGT 1499
Query 3957 GCAAGTCGGTGTTGGATTACGTGAAGTACCCAAAGTCAAGAACTGGAGTTCTGTGAGAAA 4016
|||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||
Sbjct 1500 GCAAGTCGGTGTTGGATTACGTGAGGTACCGAAAGTCAAGAACTGGAGTTCTGTGAGAAG 1559
Query 4017 GATGTCGCTGATGGAAAATGAGATTGAAACGATATCTGGCAGTCCTGAATGCCTGGAACT 4076
||||||||||||||||||||||||||||| ||||||||||||| ||||||||||||||
Sbjct 1560 GATGTCGCTGATGGAAAATGAGATTGAAATTTTATCTGGCAGTCCCGAATGCCTGGAACT 1619
Query 4077 TACAACTCTGTTCCTCCAGAAAAATGACTCATTGCTACATATCTCGGATGAATTCTTCCG 4136
||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1620 TACAACTCTGTTCCTTCAGAAAAATGATTCATTGCTACATATCTCGGATGAATTCTTCCG 1679
Query 4137 GTGTATCCCAATGCTAGTTGTTTTGGATCTATCAGGGAATGCAAGTCTCCGGAAATTGCC 4196
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct 1680 GTGTATCCCAATGCTAGTTGTTTTGGATCTATCAGGGAATTCAAGTCTCCGGAAATTGCC 1739
Query 4197 AAACCAAATATCCAAGTTGGTCTCCTTGCGCTATCTTGACTTGTCATGGACATACATGAA 4256
||||||||||| ||||| ||||||||||| |||||||||||||| ||||||||||| ||
Sbjct 1740 TAACCAAATATCAAAGTTAGTCTCCTTGCGTTATCTTGACTTGTCGTGGACATACATTAA 1799
Query 4257 GCGGCTACCTGTTGGTCTACAAGAGTTGAAAAAGCTGAGATATTTGAGATTGGATTACAT 4316
|||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 1800 GCGGCTACCTGTCGGTCTACAAGAGTTGAAAAAGCTCAGATATTTGAGATTGGATTACAT 1859
Query 4317 GAAGAGACTTAAGAGTATTTCAGGGATATCAAATTTGTCAAGTTTGAGGAAATTGCAACT 4376
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct 1860 GAAGAGACTTAAGAGTATTTCAGGGATATCAAATATATCAAGTTTGAGGAAATTGCAACT 1919
Query 4377 TTTACAGTCTAAAATGTCGCTAGACATGAGCTTAGTGGAGGAGTTTCAGCTCTTAGAACA 4436
||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||
Sbjct 1920 TTTACAGTCTAAAATGTCGCTAGACATGAGCTTAGTGGAGGAGTTGCAGCTATTAGAACA 1979
Query 4437 TTTAGAAGTTCTAAACATAAGTATCAAGTCAAGCTTGGTTGTGGAGAAGTTGTTAGATGC 4496
||||||||||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1980 TTTAGAAGTTCTAAACATAAGTATCAAGTCAAGCTTGGTAGTGGAGAAGTTGTTAAATGC 2039
Query 4497 TCCCAGGTTGGTGAAATGTCTTCAAAT-TGTAGTACTTAGAGGAGTTCAGGAAGAATCAT 4555
||||||||||||||||||||||||||| | ||||||||||||||||||||||||||||||
Sbjct 2040 TCCCAGGTTGGTGAAATGTCTTCAAATCT-TAGTACTTAGAGGAGTTCAGGAAGAATCAT 2098
Query 4556 CGGGAGTATTGACTTTGCCAGATATGGATAATCTCCATAAAGTCATCATAAGGAAGTGTG 4615
| ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 2099 CCGGAGTATTGACTTTGCCAGATATGGATAATCTCAATAAAGTCATCATAAGGAAGTGTG 2158
Query 4616 GAATGTGTGAGATAAAGATAGAGAGGACAACTTTATCATCACCATGGAGCAGAAGCCCCA 4675
||||||||||||||||||||||||||| ||||||||||| | ||| || |||||| ||||
Sbjct 2159 GAATGTGTGAGATAAAGATAGAGAGGAAAACTTTATCATTATCATCGAACAGAAGTCCCA 2218
Query 4676 AAACTCAATTCCTCCCA-AACCTCTCCACTGTGCATATAAGTAGCTGTGAGGGTCTGAAG 4734
||||||||||||||| | |||||||||||||||||||||||||||||||| |||||||||
Sbjct 2219 AAACTCAATTCCTCC-ATAACCTCTCCACTGTGCATATAAGTAGCTGTGATGGTCTGAAG 2277
Query 4735 GATTTGACGTGGTTGTTGTTCGCTCCTAACCTCACTAGTCTTGAGGTTCTGGACTCAGGG 4794
||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct 2278 GATTTGACGTGGTTGTTGTTCGCTCCTAACCTCACTAGTCTCGAGGTTCTGGACTC-GGA 2336
Query 4795 -CTAGTAGAAGGAATAATAAGCCAAGAGAAAGCTATGACTATGAGTGGTATCATTCCTTT 4853
||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 2337 ACTAGTAGAAGGAATAATAAACCAAGAGAAAGCTATGACTATGAGTGGTATCATTCCTTT 2396
Query 4854 CCAGAAACTAGAGAGTCTACGTCTACACAATCTTGCGATGTTGAGGAGCATCTACTGGCA 4913
||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||
Sbjct 2397 CCAGAAACTAGAGAGTCTACGCCTACACAATCTAGCGATGTTGAGGAGCATCTACTGGCA 2456
Query 4914 ACCTCTGCCTTTTCCATGTCTAAAGACAATCCACATAACGAAGTGTC-TGGAGCTGAGAA 4972
||||||| ||||||||||||| |||||||| |||||||||||||||| || |||||||||
Sbjct 2457 ACCTCTGTCTTTTCCATGTCTGAAGACAATTCACATAACGAAGTGTCCTG-AGCTGAGAA 2515
Query 4973 AGCTTCCACTGGATTCTGAAAGTGTCATGAGGCTTGAAGAATTTGTCATTAAATACCAAG 5032
|||||||| |||||||||||| || ||| ||| ||||||| |||||||||| |||||||
Sbjct 2516 AGCTTCCATTGGATTCTGAAATTGCCATAAGGGATGAAGAACTTGTCATTAAGTACCAAG 2575
Query 5033 AGGAAGAATGGCTTGAAAGGGTTGAATGGGAGGACGAAGCCACTAGACTCCGTTTCTTAC 5092
||||||||||||||||||||||||||||||| |||||||||| ||||||||||||||||
Sbjct 2576 AGGAAGAATGGCTTGAAAGGGTTGAATGGGACAACGAAGCCACAAGACTCCGTTTCTTAC 2635
Query 5093 CTTTCTTCAAGTTCTTTGGACCTGAATGGCAAGTTATGT-ATGTGCGGTAG 5142
|||| ||||||||||||||||||||||||||||||| || |||||||||||
Sbjct 2636 CTTTTTTCAAGTTCTTTGGACCTGAATGGCAAGTTA-GTTATGTGCGGTAG 2685
Score = 1574 bits (852), Expect = 0.0
Identities = 972/1031 (94%), Gaps = 3/1031 (0%)
Strand=Plus/Plus
Query 2509 ATGGGAGGTTGTTTAACAGTCTCGTTGTCATGTGATCAAGTTGTGAATCAAATCTCTCAA 2568
||||||| |||||||||| ||||||| || |||||| |||||||||||||||||||||||
Sbjct 1 ATGGGAGCTTGTTTAACACTCTCGTTCTCTTGTGATGAAGTTGTGAATCAAATCTCTCAA 60
Query 2569 GGTTTATGCATCAATGCAGGTTATGTTTGCAAGCTTTCCGAGAATCTAGTGGCTATGAAG 2628
|||||||||||||| | |||||| ||||| |||| ||| ||||| ||||||||||||||
Sbjct 61 GGTTTATGCATCAACGTGGGTTATATTTGCGAGCTCTCCAAGAATGTAGTGGCTATGAAG 120
Query 2629 AAAGACATGGAAGTGCTCAAGTTGAAGCGAGATGATGTGCAAAGAAGGGTAGATAGAGAA 2688
||||||||||||||||| ||| ||||||||||||||| ||||||||||||||| ||||
Sbjct 121 AAAGACATGGAAGTGCTGAAGAAAAAGCGAGATGATGTGAAAAGAAGGGTAGATATAGAA 180
Query 2689 GAGTTCACAAGGCGTCGTCAAAGGCTTTCTCAAGTCCAAGGATGGCTAACGAATGTCTCG 2748
|||||||||||||||||| |||||||||||||||||||||||||||| ||||||||||||
Sbjct 181 GAGTTCACAAGGCGTCGTGAAAGGCTTTCTCAAGTCCAAGGATGGCTTACGAATGTCTCG 240
Query 2749 ACCGTCGAGGAA-AAATTCAATGAACTGCTTATCACTAATGACGTTGAGCTTCAAAGGTT 2807
|||||||| ||| ||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 241 ACCGTCGA-GAATAAATTCAATGAACTGCTTACCACTAATGACGCTGAGCTTCAAAGGTT 299
Query 2808 GTGTCTCTTCGGATTTTGCTCTAAAAATGTGAAAATTAGCTATCTTTATGGGAAAAGGGT 2867
||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 300 GTGTCTCTTTGGATTTTGCTCTAAAAATGTGAAAATGAGCTATCTTTATGGGAAAAGGGT 359
Query 2868 TGTCATGATGTTGAAGGAGATTGAGAGTCTTAGTTCTCAAGGAGATTTTGATACGGTGAC 2927
|||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 360 TGTCCTGATGTTGAAGGAGATTGAGAGTCTTAGTTCTCAAGGAGATTTTGATACTGTGAC 419
Query 2928 TGTGGCCAATCCGATAGCTAGGATTGAAGAGATGCCTATTCAACCTACAATCGTAGGTCA 2987
| | |||| ||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TTTAGCCACTCCAATAGCTAGGATTGAAGAGATGCCTATTCAACCTACAATCGTAGGTCA 479
Query 2988 GGAAACAATGCTCGAAAGGGTATGGACCCGTCTCACGGGAGACGGAGACAAGATTGTGGG 3047
|||||||||||||||||||||||||||||||||||| | |||||||||| ||||||||||
Sbjct 480 GGAAACAATGCTCGAAAGGGTATGGACCCGTCTCACAGAAGACGGAGACGAGATTGTGGG 539
Query 3048 TCTTTATGGCATGGGTGGAGTAGGCAAAACCACCCTTCTCACACGAATCAACAACAAGTT 3107
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 540 TCTTTATGGCATGGGTGGAGTAGGCAAAACCACCCTTCTCACACGAATCAACAACAAGTT 599
Query 3108 TTCTGAAAAATGTAGCGGGTTTGGGGTTGTGATATGGGTTGTGGTGTCTAAAAGTCCAGA 3167
||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||
Sbjct 600 TTCTGAAAAATGTAGCGGGTTTGGGGTTGTGATATGGGTGGTGGTGTCTAAGAGTCCAGA 659
Query 3168 TATCCGTAGGATTCAAGGAGACATCGGGAAAAGACTAGACCTTGGGGGCGAAGAGTGGGA 3227
||||| |||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 660 TATCCATAGGATTCAAGGAGACATCGGGAAGAGACTAGACCTTGGAGGCGAAGAGTGGGA 719
Query 3228 TAATGAAAATGAAAAACAGAGAGCCCTTGACATATACAATGTCCTTGGGAAACAAAAATT 3287
||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 720 TAATGTAAATGAAAACCAGAGAGCCCTTGACATATACAATGTCCTTGGGAAACAAAAATT 779
Query 3288 TGTGTTGTTGTTGGATGATATATGGGAGAAAGTGAATTTAGAAGCGCTCGGAGTCCCTTA 3347
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||
Sbjct 780 TGTGTTGTTGTTGGATGATATATGGGAGAAAGTGAATTTAGAAGTGCTTGGAGTCCCTTA 839
Query 3348 TCCAAGCAAACAAAATGGATGCAAAGTAGCCTTTACCACTCGTTCTAGAGATGTTTGTGG 3407
|||||||| |||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct 840 TCCAAGCAGACAAAATGGATGCAAAGTAGTATTCACCACTCGTTCTAGAGATGTTTGTGG 899
Query 3408 GTGTATGGGGGTTGATGACCCGGTTGAAGTCAGTTGTCTAGAACCCGACGAAGCTTGGAA 3467
| ||||| |||||||||||||| | ||||||||||| ||||||||| ||||||| ||| |
Sbjct 900 GCGTATGCGGGTTGATGACCCGATGGAAGTCAGTTGCCTAGAACCCAACGAAGCCTGGGA 959
Query 3468 ACTGTTCCAAATGAAAGTTGGAGAAAACACATTGAAAGGCCATCCAGACATTCCTGAACT 3527
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 960 ATTGTTCCAAATGAAAGTTGGAGAAAACACATTGAAAGGCCATCCAGACATTCCTGAACT 1019
Query 3528 TGCAAGAGAAA 3538
||||||| |||
Sbjct 1020 TGCAAGA-AAA 1029
> AT4G10780.1 | Symbols: | LRR and NB-ARC domains-containing disease
resistance protein | chr4:6634779-6637457 REVERSE LENGTH=2679
Length=2679
Score = 856 bits (463), Expect = 0.0
Identities = 1330/1732 (77%), Gaps = 126/1732 (7%)
Strand=Plus/Plus
Query 4 GAAGATCTCA-AGGCAGTACGAGCTGATCTGTT-ACGTAA-GGTGCAGACAGCAGAA-GA 59
|||||||||| || || ||||| |||| |||| | | || |||||| | | |||| ||
Sbjct 130 GAAGATCTCACAGCCA-CACGAGATGATGTGTTGA-G-AAGGGTGCAAATGGAAGAAGGA 186
Query 60 GGGAGGTCTACAAAGGCTTCATCAAATCAAGGTATGGCTTAAGAGAGTCAAGACTA-TCG 118
||||||| | ||||| || ||| || |||||||||| ||||||||| ||| || |||
Sbjct 187 -AAAGGTCTAGAGAGGCTCCAACAAGTCCAGGTATGGCTCAAGAGAGTCGAGATTATTCG 245
Query 119 AATCCCAATTCAATGATC-TG-TATAGTAG-TAG-AACTGTTGAACTTCAAAGGTTGTGT 174
|| ||||||| |||| | || || ||| | | | || | ||||| ||||||| ||||||
Sbjct 246 AA-ACCAATTCTATGA-CTTGTTA-AGT-GCTCGTAA-TATTGAAATTCAAAGATTGTGT 300
Query 175 TTTTATGGTGCTGGCTCGA-GAAACTTAAGATTGAGGTATGAC-TATGGAAGAA-GGGTC 231
|||||| || | | || | | || ||||| | ||| ||| || || || || | ||
Sbjct 301 TTTTATAGTAATTGTTCAACG-AATTTAAGCTCGAGTTAT-ACGTACGG-TCAACGTGTG 357
Query 232 TTCTTGATGTTGAATATG--GTTGAAGACT-TAAAATCTAAAGGGGGTTTTGAAGA-GGT 287
|| |||||| | || | | |||||| | | | || ||||| || ||||| ||| ||
Sbjct 358 TTTTTGATGAT-AA-AGGAAGTTGAA-AATCTCAATTCTAATGGATTTTTTG-AGATAGT 413
Query 288 GGCT-CATCCAGCTACGAGAGCTGTGGGGGAGGAAAGGCCTCTACAACCGACGATTGTTG 346
||| | ||||||| | | | || | | || | |||||| | ||||| || ||| | |
Sbjct 414 AGCTGC-TCCAGCT-CCAAAACT-T--GAGATG--AGGCCTATTCAACCAACCATTATGG 466
Query 347 GTCTGGAAACAA-TTCTCGAAAAGGCATGGAACCACCTCATGGATGATGGAACTAAG-AT 404
||| |||||||| || || ||| ||| ||||| | || ||||||||||| | | | |
Sbjct 467 GTCGGGAAACAATTTTTC-AAAGGGCTTGGAATCGTCTTATGGATGATGG-AGTCGGAAC 524
Query 405 TATGGGTCTCTATGGCATGGGTGGAGTAGGAAAAACAACTCTTCTCACTCGGA-TCAACA 463
||||||||| ||||| ||||| |||||||| ||||| || |||||||| | || || |||
Sbjct 525 TATGGGTCTATATGGTATGGGGGGAGTAGGCAAAACCACCCTTCTCACGCAGATTC-ACA 583
Query 464 ATAGGTTTTGTGACACTAATG-ATGGCGTTGAAATCGTCATTTGGGTTGTGGTGTCTGGT 522
||| ||| ||| || || | |||| ||||| || || |||||||||||||||||| ||
Sbjct 584 ATACGTTACATGATAC-AAAGAATGGGGTTGACATTGTGATTTGGGTTGTGGTGTCTAGT 642
Query 523 GATCTACAAATCCACAAGATACAAAAAGAGATTGGCGAGAAAA-TAGGATTTGA-AGGCG 580
|||||||||||||||||||| ||| |||| |||||||| |||| |||||||| | |||
Sbjct 643 GATCTACAAATCCACAAGATTCAAGAAGATATTGGCGA-AAAATTAGGATTT-ATAGGTA 700
Query 581 TGGAATGGAACCAGAAA-AGTGAAAACCAGAAGGCAGTCGACATACTCAATTTTCTGAGC 639
||||||||| ||||| | |||| ||||||||| || || |||||||||| || |||
Sbjct 701 AAGAATGGAACAAGAAACA-AGAAAGCCAGAAGGCCGTTGATATACTCAATTGCCTAAGC 759
Query 640 AAAAAGAGATTTGTGTTGCTTTTGGATGACATTTGGAGGAGAGTGGAATTAACCGAGATT 699
|| ||||||||||||||||||||||||||||| |||| || |||||| ||||| |||||
Sbjct 760 AAGAAGAGATTTGTGTTGCTTTTGGATGACATATGGAAGAAAGTGGATTTAACAAAGATT 819
Query 700 GGAATTCCGAATCCA-ACAAGTGAGAACGGATGCAAAATAGCATTCACCACTCGCTCTCA 758
|||||||||| | || ||||| || ||| ||||||| ||| |||||||||||| ||||
Sbjct 820 GGAATTCCGAGT-CAGACAAGAGAAAACAAATGCAAAGTAGTATTCACCACTCGTTCTC- 877
Query 759 AAG-CGTATGTGCGA-GCATGGGGGTTCATGATCCGATGGAAGTCCGATGTTTAGGT--A 814
|| |||||||| | ||||||||||||| ||||| |||||||| | |||||| || |
Sbjct 878 TAGATGTATGTGC-ACGCATGGGGGTTCACGATCCAATGGAAGTTCAATGTTT--GTCAA 934
Query 815 CAGATGATGCGTGGGATTTGTT-CAGaaaaaaaGTAGGACAACCCA-CACTAGAAAGCCA 872
|| |||| || ||||| ||||| || | ||||||| |||||| | | ||| ||||||
Sbjct 935 CAAATGACGCATGGGAGTTGTTCCA-AGAAAAAGTTGGACAA-ATATCTTTAGGAAGCCA 992
Query 873 CCCGGACATTCCCGAAATTG-CAAGAAAAGTTGCTCGAGCATGTTGTGGCTTGCCACTAG 931
|| || |||| ||| ||| ||| ||| |||||| || |||| ||||||| ||| | |
Sbjct 993 TCCAGATATTCTTGAACTTGCCAA-AAAGGTTGCTGGAAAATGTCGTGGCTTACCATTGG 1051
Query 932 CGCTAAACGTTATTGGAGAGACAATGGCATGCAAGAAGACTACACAAGAATGGGATCATG 991
| || ||||| ||||| || || |||||| |||||| | | ||||||||| ||||||
Sbjct 1052 CACTCAACGTCATTGGCGAAACCATGGCAGGCAAGAGGGCGGTGCAAGAATGGCATCATG 1111
Query 992 CA-TTAGACGTTTTAACAACATATGCTGCA-AATTTTGGT-GCTGTGAAGGAGAAGATTC 1048
|| || || |||||||| ||||||||||| | |||| | || || | || | || |
Sbjct 1112 CAGTT-GATGTTTTAACTTCATATGCTGCAGAGTTTT-CTGGC-ATGGACGACCATATCC 1168
Query 1049 TTCCT-ATTTTGAAGTACAGCTATGATAATCTAGAAAGTGAC-AG--TGTCAAATCTTGT 1104
|| || ||||||||||| |||||||| ||||| ||| |||| || ||| | ||||||
Sbjct 1169 TT-CTGATTTTGAAGTATAGCTATGACAATCT--AAA-TGACAAGCATGTTAGGTCTTGT 1224
Query 1105 TTCCAATATTGTTCTCTGTTTCCTGAAGACGCGTT-AATAGAAAAAG-AGAGGCTGATAG 1162
||||||||||| || | | ||||||||| || |||| || ||| | || ||||||
Sbjct 1225 TTCCAATATTGCGCTTTATATCCTGAAGA-TTATTCAATA-AAGAAGTATAGATTGATAG 1282
Query 1163 ATTATTGGATATGCGAGGGATTCATTGATGG-A-TAT-GAAAATAAAAAAGGAGCTGTGG 1219
||||||||||||||||||||||||||||||| | ||| | || ||| | ||||||
Sbjct 1283 ATTATTGGATATGCGAGGGATTCATTGATGGTAATATAGGCAAGGAAA--G-AGCTGTAA 1339
Query 1220 ACCAAGGCTATGAGATACTTGGTACTCTTGTTCGTGCCTCTTTGTTGGTG-GAGGGAGGA 1278
| ||||| ||||||||||||||||||||||| ||||| | ||| ||| | |||| ||||
Sbjct 1340 ATCAAGGTTATGAGATACTTGGTACTCTTGTCCGTGCATGTTTATTG-TCCGAGGAAGGA 1398
Query 1279 AAGTTCAACAATAAGTCATATGTGAAAATGCATGATGTGGTTCGTGAGATGGCCCTGTGG 1338
||| ||| | || | | | ||||||||||| |||||||||||||| ||||| || |||
Sbjct 1399 AAGAACAA-ATTA-G--A-A-GTGAAAATGCACGATGTGGTTCGTGAAATGGCTCTTTGG 1452
Query 1339 ATAGCATCTGACCTCAGGAAGCATATAG-GTA-ATTGCATTGTACGAGCCGGTTTTGGGT 1396
| | |||||| || ||||| ||| || | | || | ||||| | ||| || | ||||
Sbjct 1453 ACATTATCTGATCTTGGGAAGAATAAAGAG-AGAT-GTATTGTTCAAGCTGGATCCGGGT 1510
Query 1397 TAAACG-AAA-TACCAAGGGATAAGGATTGGAAAGTTGTGAGAAGGATGTCATTGGTGAA 1454
|| || ||| |||||| || | |||||||| || |||||||||| ||||| || ||||
Sbjct 1511 TA--CGTAAAGTACCAAAGGTTGAGGATTGGGGAGCTGTGAGAAGGTTGTCACTGATGAA 1568
Query 1455 TAACAGGATTAAAGAGATA-CATGGCAGTCCCGAGTGTCCTAAACTTACAACTTTGTTCC 1513
||| ||||| |||||||| | ||||||||| ||||||||| |||| |||||| | ||||
Sbjct 1569 TAATGGGATTGAAGAGATATC-TGGCAGTCCTGAGTGTCCTGAACTCACAACTCTCTTCC 1627
Query 1514 TTCAGGATAACCGC-CATCTGGTAAATATCTCCGGG-GAATTCTTCAGGTC-TATGCCGA 1570
| ||||| || || |||||| ||||||| ||| ||||||||| || | ||||| ||
Sbjct 1628 TCCAGGAAAATAAATCA-CTGGTACATATCTC-GGGTGAATTCTTCCGG-CATATGC-GA 1683
Query 1571 G-GCTAGTTGTTTTGGATCTATCATGGAATATCA--ATCTC-AGTGGGTTGCCAGAGCAA 1626
|||||||||||| ||||||||| | || | || | ||| | ||| ||||||||||||
Sbjct 1684 AAGCTAGTTGTTTTAGATCTATCA-GAAA-ACCACCAGCTCGA-TGGATTGCCAGAGCAA 1740
Query 1627 ATATCAGAGTTGGTTTCATTGCGATATCTTGACTTGTCAGATTCAAGCATAG 1678
||||| |||||||| | ||| ||||||| || |||||| || ||| |||||
Sbjct 1741 ATATCGGAGTTGGTCGCCTTGAGATATCTCGATTTGTCACATACAAACATAG 1792
> AT1G12220.1 | Symbols: RPS5 | Disease resistance protein (CC-NBS-LRR
class) family | chr1:4144935-4147817 FORWARD LENGTH=2883
Length=2883
Score = 774 bits (419), Expect = 0.0
Identities = 1877/2549 (74%), Gaps = 227/2549 (9%)
Strand=Plus/Plus
Query 65 GTCTACAAAGGC-TTCATCAA-ATCAAGGTATGGCTTAAGAGAGT-C-AAGACTA-TCGA 119
||| |||||||| ||| ||| || |||||||||||| || || | || | | || |
Sbjct 270 GTCAACAAAGGCTTTC-CCAAGTTC-AGGTATGGCTTACTAGTGTCCTAA-TC-ATTC-A 324
Query 120 ATCCCAATTCAATGATCTG-TATAGTAGT-A-GAACTGTTGAACTTCAAAGGTTGTGTTT 176
| ||| || ||||||||| | | ||||| | ||| ||||| ||||||||||||||| |
Sbjct 325 AAACCAGTTTAATGATCTGCT-TCGTAGTAATGAA--GTTGAGCTTCAAAGGTTGTGTCT 381
Query 177 TTATGG-TGCTGGCTCGAGAA-ACTT-AAGATTGAGGTAT-GACTAT-GGAAGAAGGGTC 231
|| ||| | || |||| | || | || || |||||| ||| | ||| |||| ||| ||
Sbjct 382 TTGTGGTTTCT-GCTCCA-AAGATTTGAA-ATTGAGCTATCG-TTATGGGAA-AAGAGT- 435
Query 232 T-TCTTGATGTTGAA-TATGGTTGAAGACT-TAAAATCTAAAGGGGGT-TTTGAAGAGGT 287
| || |||||||||| | |||| ||| | | | ||| || || | ||||| | |||
Sbjct 436 TATCATGATGTTGAAGGA-AGTTG-AGAGTCTCAGTTCTCAA-GGATTCTTTGATGTGGT 492
Query 288 GGCTCATCCAGCTACGAGAGCTG-TGGGGGAGGAAAGGCCTCTACAACCGACGATTGTTG 346
|| | || || || |||| | | ||| || | ||| | ||||| || |||||||
Sbjct 493 TTCTGAGGCAACTCCGTTTGCTGAT-GTGGATGAGATCCCTTTTCAACCCACAATTGTTG 551
Query 347 GTCTGGAAACAATTCTCGAAAAGGCATGGAACCACCTCATGGATGATGGAACTAAGATTA 406
||| ||| | ||| || |||||||||||||||| |||||||| |||||| | ||||
Sbjct 552 GTCAGGAGATAATGCTTGAAAAGGCATGGAACCGTCTCATGGAAGATGGATCCGGGATTT 611
Query 407 TGGGTCTCTATGGCATGGGTGGAGTAGGAAAAACAACTCTTCTCACTCGGATCAACAATA 466
||||||| || || ||||| |||||||| ||||| || || ||||| |||||||||||
Sbjct 612 TGGGTCTGTACGGTATGGGGGGAGTAGGCAAAACGACACTACTCACGAAGATCAACAATA 671
Query 467 GGTTTTGTGACACTA-ATGATGGCGTTGAAATCGTCATTTGGGTTGTGGTGTCT-GGTGA 524
||||| | | | || |||| | |||| | || || |||||||| |||||| | |
Sbjct 672 AGTTTTCT-AAAATAGATGACAGATTTGATGTTGTGATATGGGTTGTTGTGTCTAGAAGT 730
Query 525 TCTACAAATCCACAAGATACAAAAAGAGATTGGCGAGAAAA--TAGGATTTGAAGGCGTG 582
|| || | ||| |||||||||| ||| | | || |||||| |||| ||| || ||
Sbjct 731 TCAAC-AGTCCGTAAGATACAAAGAGACA-TAGC-AGAAAAGGTAGGCCTTGGGGGAATG 787
Query 583 GAATGGAACCAGAAAAGTGAAAACCAGA-AGGCAGTCGACATACTCAATTTTCTGAGCAA 641
|| |||| | |||||| || ||||||| | || || ||||| | |||| | || || |
Sbjct 788 GAGTGGAGCGAGAAAAACGATAACCAGATA-GCCGTTGACATCCACAATGTCCTTAG-GA 845
Query 642 AAAGAGA-TTTGTGTTGCTT-TTGGATGACAT-TTGGAGGAGAGTGGAA-TTAACCGAGA 697
| || | ||||| || || ||||||||||| | ||| || ||| ||| |||| | |
Sbjct 846 GACGAAAGTTTGT-TTTATTGTTGGATGACATATGGGA-GAAAGT-GAATTTAAAAGCGG 902
Query 698 TTGGAATTCCGAATCCAA-CAAGTGAGAACGGATGCAAAATAGCATTCACCACTCGCTCT 756
||||| | ||| |||||| ||| || ||||||||||| |||||||||| ||||| |||
Sbjct 903 TTGGAGTCCCGTATCCAAGCAA-AGATAACGGATGCAAGGTAGCATTCACTACTCGTTCT 961
Query 757 CAAAG-CGTATGTGCGAGCATGGGGGTTCATGATCCGATGGAAGTCCGATGTTTAGGTA- 814
| || || |||| | ||||||||||| |||||||||||||||| | ||| || |
Sbjct 962 C-GAGATGTGTGTGGGCGCATGGGGGTTGATGATCCGATGGAAGTTAGCTGTCTA-CAAC 1019
Query 815 CAGATG-ATGCGTGGGATTTG-TTCAGaaaaaaaG-TAGGACAACCCACACTAGAAAGCC 871
| || | || | ||||||||| |||| || || | | ||| || ||||| | ||| |
Sbjct 1020 CCGAAGAAT-CTTGGGATTTGTTTCA-AATGAAGGTTGGGA-AAAATACACTGGGAAGTC 1076
Query 872 ACCCGGACATTCCCGAAATTGCAAGAAAAGTTGCT-CGAGCATGTTGTGGCTTGCCACTA 930
|||| |||||||||| | |||| |||||||| ||| || |||| ||||| | ||| ||
Sbjct 1077 ACCCAGACATTCCCGGACTTGCTAGAAAAGTCGCTAGGA-AATGTCGTGGCCTACCATTA 1135
Query 931 GCGCTAAACGTTATTGGAG-AGACAATGGCATGCAAGAAG-ACTA-CACAAGAATGG-GA 986
|| || || ||||| || | || | ||||||||||| ||| || | ||| |||||| |
Sbjct 1136 GCACTCAATGTTATCGGTGAAG-CTATGGCATGCAA-AAGAAC-AGTACATGAATGGTG- 1191
Query 987 TCATG-CATTAGACGTTTTAACAACATATGCTGCA-A-A-TTTT--GGTGCTGTGAAGGA 1040
||||| |||| |||||||||||| ||| ||| || | | |||| ||| || ||| ||
Sbjct 1192 TCATGCCATT-GACGTTTTAACATCATCTGC--CATAGATTTTTCAGGT-ATG-GAA-GA 1245
Query 1041 -GAAGATTCTTCC-TATTTTGAAGTACAGCTATGATAATCTAGAAAGTGACAG-TG-TCA 1096
||| |||| ||| | |||||||||| |||||||||||| || || | | || || | |
Sbjct 1246 TGAA-ATTC-TCCATGTTTTGAAGTATAGCTATGATAATTTA-AATG-GGGAGCTGATGA 1301
Query 1097 AATCTTGTTTCCAATATTGTTCTCTGTTTCCTGAAGACGCGT-TAATAGAAAAAGAGAGG 1155
|||| || |||| ||||| |||||||||||||||||| | | || || |||||| ||
Sbjct 1302 AATCCTGCTTCCTCTATTGCTCTCTGTTTCCTGAAGAC-TATCTTATTGATAAAGAGGGG 1360
Query 1156 CTGATAGATTATTGGATATGCGAGGGATTCATTGATGGATATGAAAATA-AAAAAGGAGC 1214
|| |||| || |||||| | ||||||||||| ||| | | ||| | | | ||||
Sbjct 1361 TTGGTAGACTACTGGATAAGTGAGGGATTCATAAATGAAAAAGAAGGCAGAGAGAGGA-A 1419
Query 1215 TGTGGACCAAGGCTATGAGATACTTGGTACTCTTGTTCGTGCCTCTTTGTTGGTGGAGGG 1274
| | ||||||| ||||||||| ||||||| ||||| ||||| | ||||||| |||| ||
Sbjct 1420 TATTAACCAAGGTTATGAGATAATTGGTACCCTTGTCCGTGCATGTTTGTTGTTGGA-GG 1478
Query 1275 AGGAAAGTTCAACAATAAGTCATATGTGAAAATGCATGATGTGGTTCGTGAGATGGCCCT 1334
| ||||| ||| | || ||| | |||||||||||||||||||||||||||||||| ||
Sbjct 1479 AAGAAAG--GAAC-A-AA-TCAAACGTGAAAATGCATGATGTGGTTCGTGAGATGGCTCT 1533
Query 1335 GTGGATAGCATCTGACCTCAGGAAGCATATAGGT-AATTGCATTGTACGAGCCGGTTTTG 1393
|||||| |||| || || ||||||| | ||| || || ||||| ||||| ||| |||
Sbjct 1534 ATGGATATCATCCGATCTTGGGAAGCAAA-AGGAGAAATGTATTGTGCGAGCTGGTGTTG 1592
Query 1394 GGTTAAACGAAATACCAAGGGAT-AAGGATTGGAA-AGTTGTGAGAAGGATGTCATTGGT 1451
||||| ||| |||||| | | ||||||||||| | | ||||||| ||| || ||| |
Sbjct 1593 GGTTACGTGAAGTACCAAAAG-TCAAGGATTGGAACACT-GTGAGAAAGATTTCTTTGAT 1650
Query 1452 GAATAAC-AGGATTAAAGAGATACATGGCAGTCCCGAGTGTCCTAAACTTACAACTTTGT 1510
|||||| || ||| |||||||| || ||||| ||||||| || |||||||||| | |
Sbjct 1651 GAATAATGAG-ATTGAAGAGATATTTGACAGTCACGAGTGTGCTGCACTTACAACTCTAT 1709
Query 1511 TCCTTCAGGATAACCGCCATCTGGTAAATATCTCCGGG-GAATTCTT-CAGGTCTATGCC 1568
| || || | ||| | | | |||||| ||||| || |||||||| | | | ||||||
Sbjct 1710 TTCTCCAAAAGAAC-GACGT--GGTAAAGATCTC-GGCTGAATTCTTTC-GATGTATGCC 1764
Query 1569 G-AGGCTAGTTGTTTTGGATCTATCATG-GAATATCA-A-TCTCAGTGGGTTGCCAGA-G 1623
| || || ||||| ||||||||| | |||| || | ||| | || || ||||| |
Sbjct 1765 TCAT-CTGGTGGTTTTAGATCTATCA-GAGAAT--CAGAGTCTTAATGAATTACCAGAAG 1820
Query 1624 CAAATATCAGAGTTGGTTTCATTGCGATATCTTGA-CTTGTCAGATTCAAGCATAG-TGA 1681
||||||||||| ||| || ||| ||||| || | ||||||| || || | ||| | |
Sbjct 1821 -AAATATCAGAGCTGGCCTCTTTGAGATAT-TTCAACTTGTCATATACATGTATACATCA 1878
Query 1682 GATTGCCAGTTGGTTTACGGA-AGCTGAAAAAGCTGATGCATCTGAATCTAGAGT-CTAT 1739
| | || ||||||||| ||| | |||||||||| || ||||||||||| || | ||
Sbjct 1879 -ACTACCCGTTGGTTTATGGACAT-TGAAAAAGCTAATACATCTGAATCTCGAACAC-AT 1935
Query 1740 GTTGT-GCCTTGAGAGTGT-TTCAGGGATATCGCATTTGTCGAACTTGAAGACTTTGAGG 1797
| | | |||| |||| | || ||||||||| |||||| ||| |||| ||| ||| ||
Sbjct 1936 GA-GCAGTCTTGGGAGTATATT-AGGGATATCAAATTTGTGGAATTTGAGGACATTG-GG 1992
Query 1798 -CTATTAAATTTCAGAATGTGGCTA-ACTATAAGCTTATTGGAGGAGCTGGAACGT-TTG 1854
||| | ||| |||| ||| |||| | ||| || ||| || |||||||| | | | ||
Sbjct 1993 ACTACGAGATTCCAGACTGTTGCTAGA-TATGAGTTTAGTGAAGGAGCTGCAGC-TCTTA 2050
Query 1855 GAGA-ATTTAGAAGTTCTAACCATAGAGATCA-CGTCAAGTCCAGCATTGGA-A-CAACT 1910
|| | || |||||||| ||||| |||| || | | |||||| | ||| | | | | |
Sbjct 2051 GA-ACATCTAGAAGTTATAACCCTAGATAT-ATCATCAAGTTTGG--TTGCAGAGCCATT 2106
Query 1911 GTTATGCTCTCACAGGTTGGTGAGA-TGTCTTCAAA-AGGTATCTATAAAATACATTGAC 1968
|||||||||||| ||||||||| || ||| | ||| ||||| | | || ||| || |
Sbjct 2107 GTTATGCTCTCAAAGGTTGGTG-GAATGTATA-AAAGAGGTAGATTTTAAGTACCTTAAG 2164
Query 1969 GAAGAATCAGTCAGAATATTGACGTTGCCATCTATAGGTGATCTCCGTGAAG-TCTTCAT 2027
||||||||||| ||| ||||||| |||||| | || ||| ||||||| ||| || ||
Sbjct 2165 GAAGAATCAGTGAGAGTATTGACTTTGCCAACCATGGGTAATCTCCGC-AAGCTCGGGAT 2223
Query 2028 AGGGGGATGTGGGAT-ACGGGATATAATTATAGA-AGGG-AACA-CA--A--GTGT-G-A 2077
| ||||||| || | |||| |||| ||||| ||| ||| || | || | | |
Sbjct 2224 AAAAAGATGTGGAATGA-GGGAGATAAAGATAGAGAGGACAACTTCATCATCGTCTCGGA 2282
Query 2078 -CAA--G-C--ACA--T----GCTT-TCGAAATCTATCCAAAGT-TCTGATAGCTGGTTG 2123
||| | | ||| | |||| || ||| || |||| ||| | | |||||| ||
Sbjct 2283 ACAAAAGTCCCACAACTCCATGCTTCTC-AAACCTCTCCAGAGTCTTT-ATAGCTAAATG 2340
Query 2124 CAATGGTCTTAAAGATTTGACGTGG-TTGTTGTTTGCTCCTAACCTCACTCATCTC-AAT 2181
| |||||||||| |||||||||||| || |||||||||||||| || ||| ||| ||
Sbjct 2341 CCATGGTCTTAAGGATTTGACGTGGCTT-TTGTTTGCTCCTAATCTTACTTTTCTTGAA- 2398
Query 2182 GTTTGGAACTCAA-GCGAAGTAGAAGAGATAATAAGCCAAGAGAAAGCTTCAAGG-GC-T 2238
||| || ||||| | |||||||| || ||||| || ||||||||||| | || || |
Sbjct 2399 GTTGGGTTCTCAAAG-GAAGTAGAGGATATAATTAGTGAAGAGAAAGCTG-A-GGAGCAT 2455
Query 2239 G-A--TAT-A--GTTCCTTTTCGGAAACTAGA-ATATCTACACTTGTGGGATTTAC-CAG 2290
| || | ||||||||| ||||| | || | | |||||| ||| || |||| | |
Sbjct 2456 TCAGCTACGATTGTTCCTTTTAGGAAATTGGAGACA-CTACACCTGTTTGAATTACGCGG 2514
Query 2291 AACTGAAGAGCATATACTGG---GGTCCTTTACCGTTTCCATGTCTGAATCAG--ATCAA 2345
|| ||||| || || || || | | | | ||||| |||||||| || ||| |
Sbjct 2515 G-CTCAAGAGAATCTA-TGCAAAGG-C-TCTGCATTTTCCGTGTCTGAA--AGTTATCCA 2568
Query 2346 CGTACAAAACAATTGTCAAAAGCTGAGAAAGCTTCCATTGGATTCTAAAAGTTGCATTGC 2405
|||| |||| | | || ||||||||||||||||||||||||||||||||||| | || ||
Sbjct 2569 CGTAGAAAA-A-T-GTGAAAAGCTGAGAAAGCTTCCATTGGATTCTAAAAGTGGGATCGC 2625
Query 2406 GGGTGAAGAACTCGTCATACAATACGGAGATGA-AGAATGGAAAGAAAAAGTTGAATGGG 2464
|||||||||||| |||||| | || ||||| || |||||||| ||||| ||||||||||
Sbjct 2626 GGGTGAAGAACTTGTCATATATTATGGAGA-GAGAGAATGGATAGAAAGGGTTGAATGGG 2684
Query 2465 AGGATAAAGCCACA-AGACTCCGGTTCTT 2492
|||| |||| || | |||||| |||||
Sbjct 2685 AGGACCAAGCAACTCA-ACTCCGTTTCTT 2712
> AT4G14610.1 | Symbols: | pseudogene, disease resistance protein
(CC-NBS-LRR class), putative, domain signature CC-NBS-LRR
exists, suggestive of a disease resistance protein.; blastp
match of 45% identity and 2.2e-162 P-value to GP|24461866|gb|AAN62353.1|AF506028_20|AF506028
NBS-LRR type disease resistance
protein {Poncirus trifoliata} | chr4:8380848-8383496
REVERSE LENGTH=2649
Length=2649
Score = 695 bits (376), Expect = 0.0
Identities = 835/1051 (79%), Gaps = 54/1051 (5%)
Strand=Plus/Plus
Query 2509 ATGGGAGGTTGTTTAACAGTCTCGTTGTCATGTGATCAAG-TTGTGAATCAAATCTCTCA 2567
|||||||||||| | | |||||| |||||||||||| || |||||||||| |||||||
Sbjct 1 ATGGGAGGTTGTATCTCGGTCTCGGTGTCATGTGATC-AGTTTGTGAATCAGTTCTCTCA 59
Query 2568 A-GGTTTATGCATCA-ATGCAGGTTATGTTTGCA-AG-CTTTCCGAGAATCTAGTGGCTA 2623
| || |||||| | | | |||||| || || || ||| |||||||||||| |||
Sbjct 60 ATGG-TTATGCGTTAGA-AAAGGTTA-CATT-CATAGCCTTCCCGAGAATCTAGCAGCTC 115
Query 2624 TGA-AGAAAGACATGGAAGTGCTCAAGTTGAAGCGA-GATGATGTGCAAAGAAGGGTAGA 2681
| | | |||| ||| ||||| |||||| |||| | ||||||||| |||||||||| ||
Sbjct 116 T-ACAAAAAGCCATTGAAGTTCTCAAGACAAAGC-ACGATGATGTGAAAAGAAGGGTCGA 173
Query 2682 TAGAGAAG-AGTTCACAAGGCGTCGTCAAAGGCTTTCTCAAGTCCAAGG-ATGGCTAACG 2739
|| ||||| | ||| | |||||||||| |||||||||||||| | ||| |||||| ||
Sbjct 174 TAAAGAAGAATTTC-TAGGGCGTCGTCATAGGCTTTCTCAAGTTC-AGGTATGGCTTACA 231
Query 2740 AATGTC-TCGACCGTCGAGGAAAA-ATTCAATGAACTGCTTA-TCACTAATGACGTTGAG 2796
|||||| | || |||| ||||| |||||||| || ||| | | ||| || ||||||
Sbjct 232 AATGTCGT-GATTATCGA-GAAAAGGTTCAATGATTTGTTTAGT-AATAAAGAGGTTGAG 288
Query 2797 CTTCAAAGGTTGTGTCTCTT-CGGATTTTGCTCTAAAA-ATGTGAAAATTAGCTATCTTT 2854
| | ||||||||| | || || |||||||| |||| | || ||| ||||||| ||
Sbjct 289 ATAGAGAGGTTGTGT-TTTTGTGGGTTTTGCTCCAAAAGTTTTGGAAA-GAGCTATCATT 346
Query 2855 ATGGGAAAAGGGTT-GTCATGATGTTGAAGG-AGATTGAGAGTCT-TAGTTCTCAAGGAG 2911
||||||||| |||| | | |||||||||||| || |||||| ||| | ||||| ||||
Sbjct 347 ATGGGAAAATGGTTAG-CGTGATGTTGAAGGAAG-TTGAGAATCTCT-CTTCTCGTGGAG 403
Query 2912 AT-TTTGATACGGTGACTGTGGCCAATCCGATAGCT-AGGATTGAAGAGATGCCTATTCA 2969
| |||||| |||||||| || |||| | ||||| | | |||| ||||||||||||||
Sbjct 404 -TATTTGATGTGGTGACTGAGGAAAATCTGGTAGCTCAAG-TTGAGGAGATGCCTATTCA 461
Query 2970 A-CCTACAATCGTAGGTCAGGAAACAATGCTCGAAAGGGTATGG-ACCCGTCTCACGGGA 3027
| || ||| | || ||||| || |||||||| |||||||| ||| || | ||||| | |
Sbjct 462 ATCC-ACAGTTGTTGGTCAAGAGACAATGCTTGAAAGGGTTTGGAACAC-TCTCATGAAA 519
Query 3028 GACGGAGACAAGATTGTGGGTCTT-TATGGCATGGGTGGAGTAGGCAAAACCACCCTTCT 3086
|| ||| |||||| ||||| || ||||| ||||||||||| || |||||||| |||||
Sbjct 520 GATGGATTCAAGATCATGGGT-TTATATGGAATGGGTGGAGTGGGAAAAACCACGCTTCT 578
Query 3087 CACACGAATCAACAACAAGTTTTCTGAAA-A-ATGTAGCGGGTTTGGGGTTGTGATATGG 3144
|| | ||||||||| ||||||||||||| | ||| | || |||| ||||||| |||
Sbjct 579 TACGCAAATCAACAAGAAGTTTTCTGAAACAGATG--GTGGATTTGATATTGTGATGTGG 636
Query 3145 GTTGTGGTGTCTAAAAGTC-CAGATATCCGTAGGATTCAAGGAGACATCGGGAAAAGACT 3203
||||| |||||||||| | |||| ||| ||||||||||| |||||| | ||||||||
Sbjct 637 GTTGTTGTGTCTAAAA-CCTCAGAGATCTATAGGATTCAAGAAGACATTGCAAAAAGACT 695
Query 3204 AGACCTTGGGGGCGAAGAGTGGGATAATGAAAATGAAAAAC-AGAGAGCCCTTGACATAT 3262
|| ||| |||||| |||||||| || |||| | ||||| |||||||| ||||||||
Sbjct 696 AGGTCTTACGGGCGAGGAGTGGGACAAAAAAAACG-AAAACAAGAGAGCCGTTGACATAC 754
Query 3263 ACAATGTCCTTGGGAAACAAAAATTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTGA 3322
||||||||||| ||| ||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct 755 ACAATGTCCTTAGGAGACATAAATTTGTGTTATTGTTGGATGATATATGGGAGAAAGTGA 814
Query 3323 ATTTAGAAGCGCTCGGAGTCCCTTATCCAAGCAAACAAAATGGATGCAAAGTAGCCTTTA 3382
| |||||| | | ||||| || |||||||| | | |||||||| ||| |||||| ||||
Sbjct 815 ACTTAGAATTGGTTGGAGTACCGTATCCAAGTAGAGAAAATGGAAGCATAGTAGCATTTA 874
Query 3383 CCACTCGTTCTAGAGATGTTTGTGGGTGTATGGGGGTTGATGACCCGGTTG-AAGTCAGT 3441
|||| |||||| |||||||||||||| ||||||| || ||||||||| | | |||| |||
Sbjct 875 CCACCCGTTCTCGAGATGTTTGTGGGCGTATGGGAGTCGATGACCCGAT-GCAAGTTAGT 933
Query 3442 TGTCTAGAACCCGACGAAGCTTGGAAACTGTTCCAAATGAAAGTTGGAGAAAACACATTG 3501
||| | ||||| || || |||||| | |||| |||| ||||| ||||||||||| |||
Sbjct 934 TGTTTGGAACCTGAAGATGCTTGGGATTTGTTTCAAAACAAAGTAGGAGAAAACACTTTG 993
Query 3502 AAAGGCCATCCAGACATTCCTGAACTTGCAA 3532
||| ||||||| || ||||||||||||||||
Sbjct 994 AAAAGCCATCCGGATATTCCTGAACTTGCAA 1024
> AT1G12210.1 | Symbols: RFL1 | RPS5-like 1 | chr1:4140948-4143605
FORWARD LENGTH=2658
Length=2658
Score = 641 bits (347), Expect = 0.0
Identities = 823/1045 (79%), Gaps = 64/1045 (6%)
Strand=Plus/Plus
Query 2509 ATGGGAGGTTGTTTAACAGTCTCGTTGTCATGTGATCAAGTTGTGAATCAAATCTCTCA- 2567
||||| |||||| | | ||||||||||||||||||| || ||||||| | | | |||
Sbjct 1 ATGGGCGGTTGTGTCTCGGTCTCGTTGTCATGTGATCGAGAAGTGAATC-AGT-TTTCAC 58
Query 2568 AG-GTTTATGCATCAAT-GCAGGTTATGTTTGCAAGCTTTCCGAGAATCTAG-TGGCTAT 2624
|| | ||||| ||| | | | ||||| | || || || |||||||| | | | |
Sbjct 59 AGTGGTTATGTGTCAGTGGGA-GTTATATCCAAAACCTATCTGAGAATCTGGCT-TCCCT 116
Query 2625 GAAGAAAGACATGGAAGTGCTCAA-GTTGAAGCGAGATGATGTGCAAAGAAGGGTAGATA 2683
| |||||| ||||| ||||||||| | | ||||||||||| |||||| ||||| || |||
Sbjct 117 GCAGAAAGCCATGGGAGTGCTCAACGCT-AAGCGAGATGACGTGCAAGGAAGGATAAATA 175
Query 2684 GAGAAGAGTTCACAAGGCGTCGTCA-AAGGCTTTCTCAAGTCCAAGG-ATGGC-TA-ACG 2739
|||||||||| || ||| |||| | ||||||| ||||||| | ||| ||||| || |||
Sbjct 176 GAGAAGAGTTTACTGGGCATCGT-AGAAGGCTTGCTCAAGTTC-AGGTATGGCTTACACG 233
Query 2740 AATGTCTC-GACCGTCGAGGAAA--AATTCAATGAACTGCTTATCACTAATGACGTTGAG 2796
| || | ||| |||| ||| |||||||||| |||||| |||| | ||| ||||
Sbjct 234 --TATC-CAAACCATCGA--AAACCAATTCAATGATTTGCTTAGCACTTGTAACGCTGAG 288
Query 2797 CTTCAAAGGTTGTGTCTCT-TCGGATTTTGCTCTAAAAATGTGAAAATTAGCTATCTTTA 2855
| |||||||||||||||| | |||||||||||||||||||||||||| |||||||||||
Sbjct 289 ATACAAAGGTTGTGTCTCTGT-GGATTTTGCTCTAAAAATGTGAAAATGAGCTATCTTTA 347
Query 2856 TGGGAAAAGGGTTGTCATGATGTTGAAGGAGATTGAGAGTCTTAGTTCTCAAGGAGAT-T 2914
||||||||||||| | | | |||| |||| ||||| |||||||||||||||||| | |
Sbjct 348 TGGGAAAAGGGTTATTGTCTTATTGAGGGAGGTTGAGGGTCTTAGTTCTCAAGGAG-TAT 406
Query 2915 TTGATACGGTGACTGTGGCCA-ATCCGATAGCT-AGGATTGAAGAGATGCCTATTCAA-C 2971
|||||| ||||||| || || ||| |||||| ||| |||||||| ||||||||||| |
Sbjct 407 TTGATATAGTGACTGAGG-CAGCTCCTATAGCTGAGG-TTGAAGAGTTGCCTATTCAATC 464
Query 2972 CTACAATCGTAGGTCAGGAAACAATGCTCGA-AAGGGTATGGACCCGTCTCACGGGAGAC 3030
| ||||| || |||||||| | |||||||| || |||||||| | |||| | || |||
Sbjct 465 C-ACAATTGTTGGTCAGGATTCGATGCTCGACAA-GGTATGGAACTGTCTAATGGAAGAT 522
Query 3031 GGAGACAAGATTGTGGGTCTTTATGGCATGGGTGGAGTAGGCAAAACCACCCTTCTCACA 3090
|| |||||||||||| ||||| ||||||||||||||||||||||||||||||||
Sbjct 523 AAAGTTTGGATTGTGGGTCTGTATGGTATGGGTGGAGTAGGCAAAACCACCCTTCTCACG 582
Query 3091 CGA-ATCAACAACAAGTTTTCTGAAA-AATGTAGCGGGTTTGGGGTTGTGATATGGGTTG 3148
| | |||||||| ||||||||| ||| | || | || |||| || ||||||||||| |
Sbjct 583 C-AGATCAACAATAAGTTTTCT-AAACTAGGTGGTGGATTTGATGTCGTGATATGGGTCG 640
Query 3149 TGGTGTCTAAAAGTC-CAGATA-TCCGTAGGATTC-AAGGAGACATC-GGGAAAAGACTA 3204
|||||||||||| | || | | | | || ||||| || || |||| ||||||| ||||
Sbjct 641 TGGTGTCTAAAA-ACGCA-ACAGTACATAAGATTCAAAAAAG-CATCGGGGAAAA-ACTA 696
Query 3205 GACCTTGGGGGCGAAG-AGTGGGATAATGAAAATGAAAAA-CAGAGAGCCCTTGACATAT 3262
| ||||| || |||| | ||||| | ||||| ||||| |||||||||||||||||
Sbjct 697 GGCCTTGTTGG-GAAGAATTGGGACGA-GAAAAACAAAAACCAGAGAGCCCTTGACATCC 754
Query 3263 ACAATGTCCTTGGGAAACAA-AAATTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTG 3321
|||| || ||| || | || |||||||||||||||||||||||||||||||||||||||
Sbjct 755 ACAACGTTCTTAGG-AGGAAGAAATTTGTGTTGTTGTTGGATGATATATGGGAGAAAGTG 813
Query 3322 AATTTAGAAGC-GCTCGGAGTCCCTTATCCAAGCAAACAAAATGGATGCAAAGTAGCCTT 3380
| ||| ||| | | |||||||| ||||| || | |||| |||||||||||||| ||
Sbjct 814 GAGTTA-AAGGTGATTGGAGTCCCGTATCCGAGTGGAGAAAACGGATGCAAAGTAGCATT 872
Query 3381 TACCACTCGTTCTAGAG-ATGTTTGTGGGTGTATGGGGGTTGATGACCCGGTTGAAGTCA 3439
||||||| ||||| || | |||||||| | |||||||| ||| ||||| | ||| |||
Sbjct 873 CACCACTCATTCTA-AGGAAGTTTGTGGACGCATGGGGGTAGATAACCCGATGGAAATCA 931
Query 3440 GTTGTCTAGA-ACCCGACGAA-GCTTGGAAACTGTTCCAAATGAAAGTTGGAGAAAACAC 3497
||||||| || || || || |||||| | |||| ||| |||||| || ||||||||
Sbjct 932 GTTGTCTGGACACTGGA--AACGCTTGGGATTTGTTGAAAAAGAAAGTGGGGGAAAACAC 989
Query 3498 ATT-GAAAGGCCATCCAGACATTCC 3521
||| | ||| ||| |||||||||||
Sbjct 990 ATTAGGAAG-CCACCCAGACATTCC 1013
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 256603913445
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5