BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg312408 Length=936 Score E Sequences producing significant alignments: (Bits) Value AT1G14060.1 | Symbols: | GCK domain-containing protein | chr1:... 693 0.0 > AT1G14060.1 | Symbols: | GCK domain-containing protein | chr1:4817144-4818020 REVERSE LENGTH=877 Length=877 Score = 693 bits (375), Expect = 0.0 Identities = 461/498 (93%), Gaps = 23/498 (5%) Strand=Plus/Plus Query 1 ATGGGAATTACATCATCCACAGATCCAAAAACAGAGACTTTTTCCGACCCCAAATCTCAA 60 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 128 ATGGGAATTACATCATCCACAGATCCAAAAACAGAGACTTTTTCCGACCCCAAATCTCAA 187 Query 61 AACAACGAAGAAGCTCCAGCTCCAGCTCCATCTGAGGAACTCGGAGATTCGTCTCCGTCG 120 ||||||||||||||| | |||||||| ||||||| ||||||||||| ||||||||||| Sbjct 188 AACAACGAAGAAGCT-C--CTCCAGCTAAATCTGAGAAACTCGGAGATGCGTCTCCGTCG 244 Query 121 ------G----A---GA--AACTTGGAGATTCATCAACTGTTTGGAGAGATCCAGTAGAT 165 | | || |||| |||||||||||||||||||||||||| |||| |||| Sbjct 245 ACTCCAGCTCCATCTGAGGAACTCGGAGATTCATCAACTGTTTGGAGAGACCCAGAAGAT 304 Query 166 TCCGAATCGGAT---CAACCACAAGAAGGAGGAGGAGGAGACGCAGATGGTGAAGAAGAA 222 |||||||||||| ||||| |||||||||||||||||||||||||||||||||| ||| Sbjct 305 TCCGAATCGGATGAAAAACCAGAAGAAGGAGGAGGAGGAGACGCAGATGGTGAAGAGGAA 364 Query 223 GGAGAGTGTGGGTTTTGCTTGTTTATGAAAGGAGGTGGTTGCAAAGATTCGTTTATTGCT 282 |||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 365 GGAGAGTGTGGGTTTTGCTTGTTTATGAAAGGAGGTGGTTGCAAAGATTCGTTTGTTGCT 424 Query 283 TGGGAAGAGTGTGTTG-AGAAAGCTGAGAAGAACAAGGAAGATATTGTTACTAATTGTAT 341 |||||||||||||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 425 TGGGAAGAGTGTGTTGAAG-CAGCTGAGAAGAACAAGGAAGATATTGTTACTAATTGTAT 483 Query 342 GGAAGTCACTTCGATGTTGAAGAAGTGTATGGATGAACATTCGGATTACTATCAGCCGAT 401 |||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || Sbjct 484 GGAAGTCACTTCGATGTTGAAGAAGTGTATGGATGAACATTCCGATTACTATCAGCCCAT 543 Query 402 TCTCGCTGCGgagaaagctgctgaagcagaggttaagaaggagcttgaagctgagaagaa 461 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 544 TCTCGCTGCGGAGAAAGCTGCTGAAGCAGAGGTTAAGAAGGAGCTTGAAGCTGAGAAGAA 603 Query 462 gaaggaagaagaagagaa 479 |||||||||||||||||| Sbjct 604 GAAGGAAGAAGAAGAGAA 621 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 45763307917 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5