BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312615
Length=2358
Score E
Sequences producing significant alignments: (Bits) Value
AT1G16380.1 | Symbols: ATCHX1, CHX1 | Cation/hydrogen exchanger... 3790 0.0
AT1G79400.1 | Symbols: ATCHX2, CHX2 | cation/H+ exchanger 2 | c... 1397 0.0
> AT1G16380.1 | Symbols: ATCHX1, CHX1 | Cation/hydrogen exchanger
family protein | chr1:5598453-5601367 REVERSE LENGTH=2358
Length=2358
Score = 3790 bits (2052), Expect = 0.0
Identities = 2259/2361 (96%), Gaps = 6/2361 (0%)
Strand=Plus/Plus
Query 1 ATGGATCCAAAGATGTTGTTTTGTTTACCAGAAGGAGATGCATTGTTTAATCCACTCAAT 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1 ATGGATCCAAAGATGTTGTTTTGTTTGCCAGAAGGAGATGCATTGTTTAATCCACTCAAT 60
Query 61 ACAATGTTTATTCAAATGGCTTGCATTCTCGTCTTCTCTCAATTCTTCTACCTCTTCCTT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 61 ACAATGTTTATTCAAATGGCTTGCATTCTCGTCTTCTCTCAATTCTTCTACCTATTCCTA 120
Query 121 AAACCCTGTGGCCAAGCCGGTCCCGTTGCCCAGATTCTCGCTGGGATTGTGTTGAGTTTG 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 AAACCCTGTGGCCAAGCCGGTCCCGTTGCCCAGATTCTCGCTGGGATTGTGTTGAGTTTG 180
Query 181 CTCACAATAATCCGCAAAGTCCACGAGTTCTTCCTCCAGAAAGATTCAGCGAGCTATTAC 240
|||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||
Sbjct 181 CTCACAATAATCCGCAAAGTCCACGAATTTTTCCTCCAGAAAGATTCAGCAAGCTATTAC 240
Query 241 ATCTTTTTCTCATTCGTTTTACGAACA-TCTTTCATGTTCTTGATCGGTCTCGAGATCGA 299
||||||||||||||| ||||||||||| |||| |||||||||||||||||||||||||
Sbjct 241 ATCTTTTTCTCATTCCTTTTACGAACAGCCTTT-GTGTTCTTGATCGGTCTCGAGATCGA 299
Query 300 TCTTGACTTCATAAAACGAAACTTAAAGAACTCCATTGTCATAACTTTGGGCTCCTTACT 359
|||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct 300 TCTTGACTTCATGAAACGAAACTTGAAGAACTCCATTGTCATAACTTTGGGCTCCTTAGT 359
Query 360 CACCTCTGGCATCATCTGGCTCCCTTTCCTCTGGTTTATCATCCATTTCATGCAGATCAA 419
|| ||||||||||||||||||||||||||||||||| |||||| |||||||||||||||
Sbjct 360 CATTTCTGGCATCATCTGGCTCCCTTTCCTCTGGTTTCTCATCCGTTTCATGCAGATCAA 419
Query 420 AGGCGATTTCTTAACATTTTACTTAGCCTTCCTCATTACCTTGTCCAACACGGCAGCTCC 479
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 AGGCGATTTCTTAACATTTTACTTAGCCTTCCTCATTACCTTGTCCAACACGGCAGCTCC 479
Query 480 TGTCGTCATCCGTTCGATCATCGATTGGAAACTCCACACATCTGAGATCGGACGGCTAGC 539
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 480 TGTCGTCATCCGTTCGATCATCGATTGGAAACTGCACACATCTGAGATCGGACGGCTAGC 539
Query 540 AATCTCATGTGGATTGTTCATCGAGATAACCAACATATTTCTCTACACTATCGTCCTTTC 599
||||||||| ||||||||||| |||||||||||||||||| |||||||||||||||||||
Sbjct 540 AATCTCATGCGGATTGTTCATAGAGATAACCAACATATTTATCTACACTATCGTCCTTTC 599
Query 600 TTTCATCTCAGGGACTATGACCGCCGATATTTTTATCTACACATTTGCCACCGGAGTTAT 659
||||||||| ||||||||||| || ||||||||||||||| |||||||||| ||||||||
Sbjct 600 TTTCATCTCCGGGACTATGACTGCTGATATTTTTATCTACTCATTTGCCACAGGAGTTAT 659
Query 660 AATCTTGATTAATAGATTCTTAGCTTCATGGCTCCCAAAAAGAAACCCTAAAGAGAAATA 719
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 660 AATCTTGACTAATAGATTCTTAGCTTCATGGCTCCCAAAAAGAAACCCTAAAGAGAAATA 719
Query 720 TCTCTCCAAAGCTGAAACGCTTGCTTTCTTCATCATTATTCTAATCATCGCGTTAACCAT 779
|||||||||||||||||||||||||||| ||||| |||||||||||||||||||||||||
Sbjct 720 TCTCTCCAAAGCTGAAACGCTTGCTTTCATCATCCTTATTCTAATCATCGCGTTAACCAT 779
Query 780 TGAATCCAGCAACTTAAACTCCACGCTTTTTGTGTTTTTCATCGGATTAATGTTTCCGAG 839
|||||||||||||||||||| ||||||||||||||| ||||||||||||||||||| ||
Sbjct 780 CGAATCCAGCAACTTAAACTCAACGCTTTTTGTGTTTATCATCGGATTAATGTTTCCAAG 839
Query 840 AGAAGGAAAAACTTACAGAACGATGATCCAACGGTTGAGTTACCCGATTCACGAGTTTGT 899
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct 840 AGAAGGAAAAACTTACAGAACGTTGATCCAACGGTTGAGTTACCCGATTCACGAGTTTGT 899
Query 900 TCTTCCGGTTTACTTTGGTTACATCGGGTTTAGATTTAGCGTGAATTCGTTAACCAAACG 959
|||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||
Sbjct 900 CCTTCCGGTTTACTTTGGTTACATCGGATTTAGATTCAGCGTCAATTCGTTAACCAAACG 959
Query 960 CCACTACCTCGTCCTTGCTATGACAGTGGCTTTAAGCCTACTGGGGAAGCTTCTAGGAGT 1019
||||||||||||||||| |||||| |||||||||||||||||||||||||||||||||||
Sbjct 960 CCACTACCTCGTCCTTGGTATGACTGTGGCTTTAAGCCTACTGGGGAAGCTTCTAGGAGT 1019
Query 1020 TTTATGCGCTTGTTCATTCCTAAAGATCCCAAAGAAGTATTGGCTTTTCTTGTCAACTAT 1079
||||| ||||||||||||| | |||||||||||| |||||||||||||||||||||| ||
Sbjct 1020 TTTATTCGCTTGTTCATTCTTGAAGATCCCAAAGCAGTATTGGCTTTTCTTGTCAACCAT 1079
Query 1080 GCTTTCCGTCAAAGGTCATATAGGTCTTGTTCTTCTCGACTCTAACTTGATTTACAAGAA 1139
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct 1080 GCTTTCCGTCAAAGGTCATATAGGTCTTGTTCTTCTCGACTCTAACTTGATGTACAAGAA 1139
Query 1140 ATGGTTTACTCCGGTAGTTCATGATATGTTCGTTGCGGCTCTAGTGATCATGACTTTGTT 1199
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1140 ATGGTTTACTCCGGTAGTTCATGATATGTTCGTTGCGGCTCTAGTGATCATGACTTTGTT 1199
Query 1200 AAGCGGAGTTATGACGTCTTTGTTGCTTAGA-GTGCAAGAAAAGAGTTTCGCACACATAA 1258
|||||||||||| || ||||||||||||||| || |||||||||||||||||||| ||||
Sbjct 1200 AAGCGGAGTTATAACATCTTTGTTGCTTAGAAGT-CAAGAAAAGAGTTTCGCACATATAA 1258
Query 1259 AAACATCACTTGAGTTTTTTGACACTAAAGAGGAGTTACGAGTGTTGACGTGCGTCTATG 1318
|||||||||||||||| |||||||||| |||||| ||||||||||||||||||||||||
Sbjct 1259 AAACATCACTTGAGTTATTTGACACTACCGAGGAGCTACGAGTGTTGACGTGCGTCTATG 1318
Query 1319 GTGTTCGTCATGCTCGTGGATCAATCTCTTTAGTCTCTGCTCTAAGTGGCTTCTCTCCTG 1378
| |||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||
Sbjct 1319 GCGTTCGTCATGCTCGTGGATCGATCTCTTTAGTCTCTGCTCTAAGTGGCTTTTCTCCTG 1378
Query 1379 GAGCTTCTTCTTCGCCGTTCACGCCTTATCTTATGCACCTCATACCGCTCCCGAAGAAGC 1438
|| ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct 1379 GAACTTCTTCTTCGCCGTTCACGCCTTACCTTATGCACCTCATACCGCTCCCGAAGAAGC 1438
Query 1439 GGAAAACGGAATTGTTGTACCACGAATTAGACGAAGATGGAGGAAATTCCAACGGTGGAG 1498
||||||| ||||||||||||||||||||||||||||||| ||||||||||||||| ||||
Sbjct 1439 GGAAAACTGAATTGTTGTACCACGAATTAGACGAAGATGCAGGAAATTCCAACGGCGGAG 1498
Query 1499 ACGATGAGTTCGGGACTAATGAAGGACTAGAGATCAATGACTCGATCGATTCGTTTACTA 1558
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1499 ACGATGAGTTCGGGACTAATGAAGGACTAGAGATCAATGACTCGATCGATTCGTTTACTA 1558
Query 1559 AAGACAGAAAAATCATGATCCGGCAAGTGAAACTCGTGGCACCGATGGAGACTATGCACG 1618
|||||||||||| ||| ||||||| |||||||| ||||| |||||||||| ||||||||
Sbjct 1559 GAGACAGAAAAATAATGGTCCGGCAGGTGAAACTTGTGGCGCCGATGGAGAATATGCACG 1618
Query 1619 AAGAGATCTGTAACGCGACTGAAGATCTTCGCGTCTCGATTGTGTTTCTTCCCTTTC-AT 1677
|||||||||||||||| |||||||||||||| || ||||| |||||||| || |||| ||
Sbjct 1619 AAGAGATCTGTAACGCCACTGAAGATCTTCGTGTATCGATCGTGTTTCTACC-TTTCCAT 1677
Query 1678 AAACACCAGAGGATCGACGGGAAAACCACCAATGACGGGGAAGTTTTTCGACATATGAAC 1737
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 1678 AAACACCAGAGGATCGACGGGAAAACCACGAATGACGGGGAAGTTTTTCGACATATGAAC 1737
Query 1738 CGGAAGGTTCTAAAGCAAGCTCAGTGTTCGATAGGTATCTTTGTTGATAGAAACATAACC 1797
||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct 1738 CGGAAGGTTCTAAAGCAAGCTCAATGTTCGATTGGTATCTTTGTGGATAGAAACATAACA 1797
Query 1798 GGGTTTCACCAGCTTCACGGCTCTGATTCGGTACAACACGTTGCGGCGTTGTTCTTCGGT 1857
|||||||||||||||||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct 1798 GGGTTTCACCAGCTTCACGGGTCTGATTCGGTACAACACGTTGCTGCATTGTTCTTCGGT 1857
Query 1858 GGTCCTGATGACCGTGAGGCTCTGTCCTTGTGCAAGTGGCTTACCAATAACTCTCAGATT 1917
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1858 GGTCCTGATGATCGTGAGGCTCTGTCCTTGTGCAAGTGGCTTACCAATAACTCTCAGATT 1917
Query 1918 CACCTCACTGTAATACAGTTTGTGGCCGATGACTCAAAGATGGAGAAACTTGTTGGTGAC 1977
||||||||||| |||||||||||||| ||||||||||||| |||||| |||| || |||
Sbjct 1918 CACCTCACTGTCATACAGTTTGTGGCGGATGACTCAAAGACAGAGAAAATTGTCGGAGAC 1977
Query 1978 GCGGTGACCAAGGAAAACAACGAAGTATTCTTGGAGATTGTTAGTAAAGATCAAACCGAA 2037
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 1978 GCGGTGACCAAGGAAAACAACGAAGTATTCTTGGAGATTGTTAGTGAAGATCAAACCGAA 2037
Query 2038 GACGAAACAGATCGAATCTTCTTAGAAGAATTCTATAACAGATTTGTGACGACGGGGCAA 2097
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 2038 AACGAAACAGATCGAATCTTCTTAGAAGAATTCTATCACAGATTTGTGACGACGGGGCAA 2097
Query 2098 GTTGGATTCATAGAGAAGCGAGTGAGCAACGGAGTGCAGACGCTGACAATTCTGAGAGAG 2157
||||||||||||||||||||||||||||||||| ||||||||||||||||||| ||||||
Sbjct 2098 GTTGGATTCATAGAGAAGCGAGTGAGCAACGGAATGCAGACGCTGACAATTCTAAGAGAG 2157
Query 2158 ATCGGGGAGATGTATTCACTGTTTGTGGTAGGAAAAAACAGAGGAGATTGTCCAATGACT 2217
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2158 ATCGGGGAGATGTATTCACTGTTTGTGGTAGGAAAAAACAGAGGAGATTGTCCAATGACT 2217
Query 2218 TCAGGAATGAACGATTGGGAAGAGTGTCCGGAATTAGGAACAGTCGGAGATTTCTTGGCT 2277
||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 2218 TCAGGAATGAATGATTGGGAAGAGTGTCCGGAATTAGGAACGGTCGGAGATTTCTTGGCT 2277
Query 2278 TCATCAAATATGGATGTAAATGCTTCTGTATTAGTAGTTCAAAGACATAGAAACTCATTT 2337
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 2278 TCATCAAATATGGATGTAAATGCTTCTGTATTAGTAGTTCAAAGACATAGAAACTCATTT 2337
Query 2338 GATAGCTTTGTAGATGATTAG 2358
||||||||||||||||| |||
Sbjct 2338 GATAGCTTTGTAGATGAATAG 2358
> AT1G79400.1 | Symbols: ATCHX2, CHX2 | cation/H+ exchanger 2 |
chr1:29864992-29867840 FORWARD LENGTH=2352
Length=2352
Score = 1397 bits (756), Expect = 0.0
Identities = 1899/2432 (78%), Gaps = 154/2432 (6%)
Strand=Plus/Plus
Query 1 ATGGATCCAAAGATGTTGTTTTGTTTACCAGAAGGAGATGCATTGTTTAATCCACTCAAT 60
|||||||||||| ||||| |||| ||||| ||||||||| | |||||||||| || |||
Sbjct 1 ATGGATCCAAAGTTGTTGCTTTGCTTACCTCAAGGAGATGAACTGTTTAATCCCCTTAAT 60
Query 61 ACAATGTTTATTCAAATGGCTTGCATTCTCGTCTTCTCTCAATTCTTCTACCT-CTTCCT 119
|| ||||||||||||||||||||||||||||||||||||||||| || || || ||| ||
Sbjct 61 ACCATGTTTATTCAAATGGCTTGCATTCTCGTCTTCTCTCAATTGTTTTATCTCCTT-CT 119
Query 120 TAAACCCTGTGGCCAAGCCGGTCCCGTTGCCCAGATTCTCGCTGGGATTGTGTTGA---- 175
||||||||| |||||||| |||||||||||||||||||| ||||||||||||||||
Sbjct 120 TAAACCCTGCGGCCAAGCTGGTCCCGTTGCCCAGATTCTTGCTGGGATTGTGTTGAGTCC 179
Query 176 -G-TTTGCTCACAATAAT-CCGCAAAGTCCACGAGTTCTTCCTCCAGAAAGATTCAGCGA 232
| ||||||| ||| ||| || ||||| | || ||||||||||||||| || |||| |
Sbjct 180 TGTTTTGCTCTCAAGAATACC-TAAAGTTAAGGAATTCTTCCTCCAGAAAAATGCAGC-A 237
Query 233 G-CTATTACAT-CTTTTTCTCATTCGTTTTACGAACATCTTTCATGTTCTTGATCGGTCT 290
| |||||| | ||| ||||| |||| |||||| ||||||||||||||||||||||||||
Sbjct 238 GATTATTAC-TCCTTCTTCTCCTTCGCTTTACGGACATCTTTCATGTTCTTGATCGGTCT 296
Query 291 CG-AGATCGATCTTGACTTCAT-AAAACGAAACTTAAAG-AA-CTCCATTGTCATAACTT 346
| || | ||||| | ||||| | || |||| || ||| || || | || ||||| |
Sbjct 297 TGAAG-TGGATCTACATTTCATGAGAA-GAAATTTCAAGAAAGCTGC--GGTGATAACCT 352
Query 347 TGGGCTCCTTAC-TCACCTCTGGCATCATCTGGCTCCCTTTCCTCTGGT-TTA-TCATCC 403
|| |||| || | | || ||| || || | || | ||||| | | ||| ||||||
Sbjct 353 TGAGCTCATT-CGTGGTTTCCGGCCTCCTCAGTTTCGC-TTCCT-TAATGTTATTCATCC 409
Query 404 ATTT-CATGCAGATCAAAGGCGATTTCTTAACATTTTACTTAG-CCTTCCTCATTACCTT 461
||| || |||||||| |||| ||| || |||| ||| | ||| ||| |||||||
Sbjct 410 CTTTGTTTG-GGATCAAAGAAGATTACTTTACGTTTTTCTTGGTTCTT-CTCGTTACCTT 467
Query 462 GTCCAACACGGCAGCTCCTGTCGTCA-TCCGTTCGATCATC-GATTGGAAACTCCACACA 519
||| ||||||||| |||||||||| | ||||||| ||| | |||||||||||| |||||
Sbjct 468 GTCTAACACGGCATCTCCTGTCGT-AGTCCGTTCAATC-GCTGATTGGAAACTCAACACA 525
Query 520 TCTGAGATCGGACGGCTAG-CAATCTCATGTG-GATTGTTCATCGAGA-TAACCAACATA 576
| ||||||||||||||| | |||||||||||| | ||||||||||| | |||| ||| |
Sbjct 526 TGTGAGATCGGACGGCT-GACAATCTCATGTGCG-TTGTTCATCGA-ATTAACAAACGTG 582
Query 577 TTTCTCTACACTATCGTCCTTTCTTTCATCTCAGGGACTATGACCGC-CG-A-TATTTTT 633
||||||||||||| || | | |||||||| || ||||| | | | | | || ||
Sbjct 583 GTTCTCTACACTATAATCATGGCGTTCATCTCTGGAACTATCA-TACTTGAACTCTTCTT 641
Query 634 ATCTACACATTT-GCCACCGGAGTTATAATCTTGATTAATA-GATTCTTAGCTTCATGGC 691
| | | ||| || |||| || |||| ||||| || | | |||||||| ||||||
Sbjct 642 GT-T--TCTTTTGGCAACCGTAGCCCTAATATTGATCAACATG-GTCTTAGCTCCATGGC 697
Query 692 TCCCAAAAAGAAACCCTAAAGAGAAATATCTCTCCAAA-GCTGAAACGCTT-GCTTTCTT 749
| ||||| || |||||||||||||| || |||| |||| |||||||| || | ||||||
Sbjct 698 TTCCAAAGAGGAACCCTAAAGAGAAGTACCTCT-CAAAGGCTGAAAC-TTTAGTTTTCTT 755
Query 750 CATCATT-ATTCTAATCATCGCGT-TAACCATTGAATCC-AGCAACT-TAAACTCCACGC 805
|||| || |||| ||||||| || |||| || |||||| | | | | |||| ||| ||
Sbjct 756 CATC-TTCCTTCTCATCATCG-GTATAACTATCGAATCCTA-CGA-TGTAAATTCCTCGG 811
Query 806 TTTTTGTGTTT-TTCATCGG-ATTAATGTTTCCGA-GAGAAGGAAAAACTTACAGAACGA 862
||| ||| ||| ||| || | |||||||||| | || ||||||| ||| ||||||||
Sbjct 812 TTTCTGT-TTTCGCCATTGGCA-TAATGTTTCC-ACGACAAGGAAAGACTCACAGAACGT 868
Query 863 TGATCCAACGG-TTGAGTTACCCGATTCACGAGTTTGTTCTTCCGGTTTACTTTGGTTAC 921
|||| |||||| || |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 869 TGATACAACGGCTT-AGTTACCCGATTCACGAGTTTGTTCTTCCGGTTTACTTTGGTTAC 927
Query 922 ATCGGGTTTAGATTTAGCGTGAAT-TCGTTAACCAAACGCCACTACCTC-GTCCTTGCTA 979
|| || || ||||| ||| | || |||||||||||||| |||||| || | | ||
Sbjct 928 ATTGGATTCAGATTCAGCAT-CATCGCGTTAACCAAACGCTTTTACCTCGGT-ATAGTTA 985
Query 980 TGA-CAGTGGCTT-TAAGCC-TA-CTGGGGAAGCTTCTAGGAGTTTTATGCGCTTGTTCA 1035
| | | || | || ||| || || || ||||| || | || || || ||||||| | |
Sbjct 986 TTATC-GT-GATTGTAA-CCATAGCT-GGGAAATTTATTGGTGTAATAAGCGCTTG-T-A 1039
Query 1036 T-T-CCTAAAGATCCCAAAGAAGTATTGGCTTTTCTTGTCAACTATGCTTTCCGTCAAAG 1093
| | ||| |||||||| ||||| |||||||||||||| | || || || || || ||||
Sbjct 1040 TGTACCTGAAGATCCCTAAGAAATATTGGCTTTTCTTACCCACCATTCTCTCTGTTAAAG 1099
Query 1094 GTCATATAGGTCTTGTTCTTCTCGACTCTAACTTGATT--TACAAGAAATGGTTTA-CTC 1150
| ||| | |||||| ||||||| ||||| ||| | ||| | |||||||||| | | |
Sbjct 1100 GCCATGTCGGTCTTCTTCTTCTAGACTCCAAC-T-ATTCCGAAAAGAAATGGTGGACCAC 1157
Query 1151 CGGTAGTTCATGATATGTTCGTTGCGGCTCTAGTGATCATGAC-TTTGTTAAGCGGAGTT 1209
|| ||||||||||| | || || ||| | ||||| | ||| | | |||| || |||
Sbjct 1158 AACTA-TTCATGATATGATGGTGGCTGCTTTGGTGATAACGACGCTAG-TAAGTGGTGTT 1215
Query 1210 ATGACGTCTTTGTTGCTTAGAGTGCAAGA-A-AA-GAGTTTCGCACACATA-AAAACATC 1265
|| | ||||| ||||||| | ||||| | || || ||| || || | || || ||
Sbjct 1216 CTGGCATCTTTCTTGCTTA-A-AACAAGAGAGAAGGACTTT-GCTTAC-GAGAAGACTTC 1271
Query 1266 ACTTGAGTTTTTTGACACTAAAGAGGAGTTACG-AGTGTTGA-CGTGCGTCTATGGTGTT 1323
||||||| | | |||| || ||||| ||||| | | || | |||||| |||||| ||
Sbjct 1272 GCTTGAGTCTCATAACACGAACGAGGAATTACGCA-T-TTTATCGTGCGCCTATGGAGTC 1329
Query 1324 CGTCATGCTCGTGGAT-CAATCTCT-TTAGTCTCTG-CTCTAAGTGGCTTCTCTCCTGGA 1380
||||||||||| || | | |||||| || ||||| | || | || || | |||| ||||
Sbjct 1330 CGTCATGCTCGCGG-TGCGATCTCTCTT-GTCTCGGCCT-TGAGCGG--T-TCTCGTGGA 1383
Query 1381 GCTTCTTCTTCGCCGTTCACGCCTTAT-CTTATGCACCTCATACCGCTCCCGAAGAAGCG 1439
|| | ||| ||||| || || | | ||||||||||| |||| ||||| ||||| |
Sbjct 1384 GC--C-TCTGATCCGTTTACACC-TCTGCTTATGCACCTTGTACCCCTCCCCAAGAAAC- 1438
Query 1440 GAAAA-CGGAATTGTTGTACCACGAATTA-GACGAAGATGGAGGAAATTCCAACGGTGGA 1497
||||| ||||| || |||| || | | | |||||||||||||| ||| | || ||||
Sbjct 1439 GAAAATCGGAACTGATGTATCATG-AGCACGACGAAGATGGAGGCAATGCGAA---TGGA 1494
Query 1498 GACGATGAGTTCGGGACTAATGAAGGACTAGAGATCAATGACTCGATCGATTCGTTTACT 1557
|| || || |||||||| || ||||| |||||||||| || ||||| ||||||||| ||
Sbjct 1495 GATGACGAATTCGGGACCAACGAAGGTTTAGAGATCAACGATTCGATTGATTCGTTTGCT 1554
Query 1558 AAAGACAGAAAAATCATGATCCGGCAAGTGAAACTCGTGGCACCGATGGAGACTATGCAC 1617
|||||||| |||||| |||||| |||||||| |||||| | | |||| | |||||||
Sbjct 1555 AAAGACAGCAAAATCTTGATCCAACAAGTGAAGCTCGTGACTCAGATGCTTAATATGCAC 1614
Query 1618 GAAGAGATCTGTAACGCGACTGAAGATCTTCGCGTCTCGATTGTGTTTCTTCCCTTTCAT 1677
||||||||||||||||| || || |||||||| || || ||||| |||||||| ||||||
Sbjct 1615 GAAGAGATCTGTAACGCAACAGAGGATCTTCGAGTTTCCATTGTATTTCTTCCGTTTCAT 1674
Query 1678 AAACACCAGAGGATCGACGGGAAAACCACCAATGACGGGGAAGTTTTTC-GACATATGAA 1736
||||||||||| ||||| ||||| || || || || |||||| | ||| |||| |||||
Sbjct 1675 AAACACCAGAGAATCGATGGGAAGACTACAAACGATGGGGAA-CTGTTCAGACAGATGAA 1733
Query 1737 CCGGAAGGTTCTAAAGCAAGCTCAGTGTTCGATAGGTATCTTTGTTGATAGAAACATAAC 1796
||| || ||||||| ||| | || |||||| || || || ||||| || | ||||||||
Sbjct 1734 CCGTAATGTTCTAAGGCACGGTCCGTGTTCCATTGGCATTTTTGTGGACCGTAACATAAC 1793
Query 1797 CGGGTTTCACCAGCTTCACGGCTCTGATTCGGTACAACACGTTGCGGCGTTGTTCTTCGG 1856
||| ||||| |||| ||||| | |||||| ||||||||||| ||| | |||||||| ||
Sbjct 1794 CGGATTTCAGCAGCCGCACGGGTTTGATTCTGTACAACACGTCGCGACATTGTTCTTTGG 1853
Query 1857 TGGTCCTGATGACCGTGAGGCTCTGTCCT-TGTGCAAG-TGGCTTACCAATAACT-CTCA 1913
|||||| ||||| ||||||||||| | || ||||| || ||||| | ||||| | |||
Sbjct 1854 TGGTCCGGATGATCGTGAGGCTCT-TGCTCTGTGC-AGATGGCTCGCGAATAA-TACTCT 1910
Query 1914 GATTCACCTCACTGTAATACAGTTTGTGGCCGATGACTCAAAGATGGAGAAACT--TGTT 1971
|||||| ||||| || ||||||||||| |||| || |||||| | ||| ||| ||||
Sbjct 1911 GATTCATCTCACAGTTATACAGTTTGTCTCCGAGGAATCAAAG--GCAGAGACTCCTGTT 1968
Query 1972 GGTGACGCGGTGACCAAG-GAAAACAACGAAGTATTCTTGG-AGATTGTTAGTAAAG-AT 2028
|| | || ||| || | || || || || || ||| ||| || || | | || | ||
Sbjct 1969 GGAAATGCTATGA-CACGAGATAATAATGAGGTTTTCATGGAAG-TT-CTGGGAAGGAAT 2025
Query 2029 CAAACCGAAGACGAAACAGATCGAATCTTCTTAGAAGAATTCTATAACAGATTTGTGACG 2088
||||| ||| | ||||||||||| | |||||||||||||||||||||||||||||| ||
Sbjct 2026 CAAACTGAACAAGAAACAGATCGGAGCTTCTTAGAAGAATTCTATAACAGATTTGTAACA 2085
Query 2089 ACGGGGCAAGTTGGATTCATAGAGAAGCGAGTGAGCAACGGAGTGCAGACGCTGACAATT 2148
||||| ||||| || ||||||||||||| ||||||||| ||| ||| |||||||| |||
Sbjct 2086 ACGGGACAAGTGGGGTTCATAGAGAAGCTAGTGAGCAATGGACCGCATACGCTGACTATT 2145
Query 2149 CTGAGAGAGATCGGGGAGATGTATTCACTGTTTGTGGTAGGAAAAAACAGAGGAGATTGT 2208
|| |||||||| || ||||||||||||||||||||||| ||||| | || |||||||||
Sbjct 2146 CTAAGAGAGATTGGAGAGATGTATTCACTGTTTGTGGTCGGAAAGAGCACAGGAGATTGC 2205
Query 2209 CCAATGAC-TTCAGGAATGAACGATTGGGAAGAGTGTCCGGA-ATTAGGAACAGTCGGAG 2266
|| ||||| | | ||||||| |||||||||||||||||||| || ||||| ||||| |
Sbjct 2206 CCTATGACGGTGA-GAATGAAAGATTGGGAAGAGTGTCCGGAGCTT-GGAACTGTCGGTG 2263
Query 2267 ATTTCTTGGCTTCATCAAATATGGATGTAAATGCTTCTGTATTAGTAGTTCAAAGACATA 2326
||||||||||||| || | | ||||||||||||||||||||||||||||||||||| |
Sbjct 2264 ATTTCTTGGCTTCGTC---TTTAGATGTAAATGCTTCTGTATTAGTAGTTCAAAGACAGA 2320
Query 2327 GAAACTCATTTGATAGCTTTGTAGATGATTAG 2358
|| | ||| |||||||||| |||||||||||
Sbjct 2321 GACATTCACATGATAGCTTTATAGATGATTAG 2352
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 117067670940
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5