BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312649
Length=2274
Score E
Sequences producing significant alignments: (Bits) Value
AT1G16760.1 | Symbols: | Protein kinase protein with adenine n... 3690 0.0
AT1G78940.2 | Symbols: | Protein kinase protein with adenine n... 1295 0.0
> AT1G16760.1 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain | chr1:5734234-5737307
FORWARD LENGTH=2277
Length=2277
Score = 3690 bits (1998), Expect = 0.0
Identities = 2185/2275 (96%), Gaps = 14/2275 (1%)
Strand=Plus/Plus
Query 1 ATGTGGCTACCGAAAGCGGACGCGACAAATAAAGGAACAAGAAGTGGTTCTGTGGCGATT 60
||||||||||| ||||| ||||||||||| ||||||||||||| |||||| |||||||||
Sbjct 1 ATGTGGCTACCTAAAGCAGACGCGACAAAGAAAGGAACAAGAAATGGTTCGGTGGCGATT 60
Query 61 GCAATAGACAAAGACAAAAGTAGTCAAAATGCTATTAAATGGACATTGGAGAATCTTGCT 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 GCAATAGACAAAGACAAAAGTAGTCAAAATGCTATTAAATGGACATTGGAGAATCTTGCT 120
Query 121 ACTCGTGGCCAAACTCTTGCTCTTATTCATGTCCTTCCCAAATCTCAATCTTCTTTAGAC 180
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 121 ACTCGTGGCCAGACTCTTGCTCTTATTCATGTCCTTCCCAAATCTCAATCTTCTTTAGAC 180
Query 181 ATTGAAGAAGGAATAACACATAAGCAGCAAATGGAGAAACAAACGAAAGATCTCTTTGTA 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 181 ATTGAAGAAGGAATAACACATAAGCAGCAAATGGAGAAACAAACGAAAGATCTCTTTGTA 240
Query 241 TCCTTCCACTGTT-TCTGCAGCCGCAAAGAGATTCATTGTCTGGACGTTGTGCTTGAAGA 299
||||||||||||| | ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 241 TCCTTCCACTGTTAT-TGCAGCCGCAAAGAGATTCATTGTCTGGACGTTGTGCTTGAAGA 299
Query 300 CGTAGACAAAGTTAAAGCGATAGTCGAATATGTTACGGTCTCTGCGATTGAGAATTTAGT 359
|||||||||||| |||||||| || |||||||||||||||||||||||||||||||||||
Sbjct 300 CGTAGACAAAGTCAAAGCGATTGTTGAATATGTTACGGTCTCTGCGATTGAGAATTTAGT 359
Query 360 TCTTGGTGCTCCATCACGGAATAGCTTTATGAGGAGATTCAAAACTGATTTACCAACGAG 419
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct 360 TCTTGGTGCTCCATCACGGAATAGCTTTATGAGGAGATTCAAAACGGATTTACCAACGAG 419
Query 420 TGTGTCAAAGACAGCTCCAGATTTCTGCAATGTTTACGTCATTTCCAAAGGCAAAATCTC 479
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 420 TGTGTCAAAGGCAGCTCCAGATTTCTGCAATGTTTACGTCATTTCCAAAGGCAAAATCTC 479
Query 480 TTCGTTACGAAACGCCTCACGTCCTGCTCCTTACCATCCATCAGTACTTCTCAGCGAAGT 539
||| |||||||||||||| |||| |||||| |||||||||||||| | |||||||||||
Sbjct 480 TTCCTTACGAAACGCCTCGCGTCTTGCTCCCTACCATCCATCAGT--T-CTCAGCGAAGT 536
Query 540 AGACAATCATGAAACGATTGCCCTCGAGAGGAAACATAAAACAGCTAACACGCCGGCCTT 599
|||| |||||||||| |||||| | ||||| |||||||||||||||||||| ||||||||
Sbjct 537 AGACGATCATGAAACTATTGCCATTGAGAGAAAACATAAAACAGCTAACACACCGGCCTT 596
Query 600 GCCTAGGGGACGAAGATC-AGTTGATTCAGATGGTACCAGATTAGGGCTTCCGAAACCGC 658
||||| |||||||||||| | |||||||||||| ||||||||||||||||||||||||||
Sbjct 597 GCCTAAGGGACGAAGATCGA-TTGATTCAGATGTTACCAGATTAGGGCTTCCGAAACCGC 655
Query 659 CACATGGACATATGAAATTAGTGGGGGATTTCTCAGATTCAGAGTCCGAGTTCTCATTCA 718
|||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||
Sbjct 656 CACATGGACATATGAAATTAATGGGGGATTTTTCAGATTCAGAGTCCGAGTTCTCATTCA 715
Query 719 TCAGTGCTTCTCAACAAGAATC--C-GACCTTTCCTTCATCAGCTCCGGGAGGCCGAGTG 775
|||||||||||||||||||||| | ||||||||||||||||||||||| ||||||||||
Sbjct 716 TCAGTGCTTCTCAACAAGAATCATCCGACCTTTCCTTCATCAGCTCCGGAAGGCCGAGTG 775
Query 776 TAGACCGATCTTCCTTCACCTACGATTTACCAGAATCAGCAAGAACCTCAAGAATGTCAA 835
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 776 TAGACCGATCTTCCTTCACCTACGATTTACCAGAATCAGCAAGAACCTCAAGAATGTCAA 835
Query 836 CGAGCTCAGAGCAGAGCATTGGGTCACATAGATTAGGAATCAAGTTTACGGATTTGAGTT 895
||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||
Sbjct 836 CGAGCTCAGAGCAGAGCATTGGGTCTCATAGATTAGGAATCAAGTTTACAGATTTGAGTT 895
Query 896 ATCTCAATGGTTCTTCTACGGTTTCTGATGAGAGTGGAAGAACTTCTTGTTCCTATTCAT 955
||||||||||||||||| ||||||||||||| |||||||||||||||||||| | |||||
Sbjct 896 ATCTCAATGGTTCTTCTTCGGTTTCTGATGAAAGTGGAAGAACTTCTTGTTCATTTTCAT 955
Query 956 CACAGAGCTTGGATGATGTAGAAGCTCAAATGAGGAGACTGCGTTTAGAGCTGAAACAAA 1015
| ||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct 956 CTCAGAGCTTGAATGATGTAGAAGCTCAAATGAAGAGACTGCGTTTGGAGCTGAAACAAA 1015
Query 1016 CTATGGATATGTATAGTTCAGCTTGCAGAGAAGCTTTAACCGCAAGGCACGAGGCGACAG 1075
|||||||||||||||| |||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1016 CTATGGATATGTATAGCTCAGCTTGCAGAGAAGCTTTAACCGCAAGGAACGAGGCGACAG 1075
Query 1076 AGCTGCAAAAGCTGAGGACAGAAGAGGAAAGACGATTGGAGGAACTAAAGATGACAGAGG 1135
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1076 AGCTGCAAAAGCTGAGGACAGAAGAGGAAAGACGATTGGAGGAACTAAAGATGACAGAGG 1135
Query 1136 AAATAGCAATGTCAATGGTTGAAAACGAGAGAGCAAAAGCCAAAACAGCCTTGGAAGCTG 1195
||| |||||||||||| || |||||||||||||||||||| |||||||||||||||||||
Sbjct 1136 AAACAGCAATGTCAATAGTGGAAAACGAGAGAGCAAAAGCGAAAACAGCCTTGGAAGCTG 1195
Query 1196 CTGAAGCTGCAAACAGGCTTGCTGAAGTGGAAGCAAAGAGGA-GGGTACACGCAGAGATG 1254
|||||||||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct 1196 CTGAAGCTGCAAACAGGCTTGCTGAAGTGGAAGCAAAGAG-ACGGGTACACGCAGAGATG 1254
Query 1255 AAGGTATTGAAAGAAAGCGATTC-TTTCTCTCGACATAGCATTGTTCGATATAGAAAATA 1313
||||||||||||||||||||||| ||| ||||||||||||||||||||||| ||||||||
Sbjct 1255 AAGGTATTGAAAGAAAGCGATTCATTT-TCTCGACATAGCATTGTTCGATACAGAAAATA 1313
Query 1314 CACTGTTCAAGAGATCGAAGAAGGTACAGCGAACTTCGCAGAATCAAGAAAAGTTGGAGA 1373
| ||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||
Sbjct 1314 TAGTGTTCAAGAGATCGAAGAAGGTACAGCAAACTTCGCAGAGTCAAGAAAAGTTGGAGA 1373
Query 1374 AGGAGGGTATGGGCCTGTGTTTAGAGGTCATCTTGATCACACAAGTGTTGCTGTTAAGGT 1433
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1374 AGGAGGGTATGGGCCTGTGTTTAGAGGTCATCTTGATCACACAAGTGTTGCTGTTAAGGT 1433
Query 1434 TTTACGCCCTGACGCTGCTCAAGGAAGATCACAGTTTCACAAAGAGGTTGAGGTATTAAG 1493
|||||||||||| |||||||||||||||||||||||||||||||||||||| ||| ||||
Sbjct 1434 TTTACGCCCTGATGCTGCTCAAGGAAGATCACAGTTTCACAAAGAGGTTGAAGTACTAAG 1493
Query 1494 CTGCATAAGGCATCCAAACATGGTGCTTCTCTTAGGAGCTTGTCCAGAATACGGTATTCT 1553
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1494 CTGCATAAGGCATCCAAACATGGTGCTTCTCTTAGGAGCTTGTCCAGAATACGGTATTCT 1553
Query 1554 CGTCTACGAATACATGGCCAAAGGAAGCTTAGATGACCGCCTTTTCAGACGCGGAAACAC 1613
|||||||||||||||||||| ||||||||||||||| || ||||||||||||||||||||
Sbjct 1554 CGTCTACGAATACATGGCCAGAGGAAGCTTAGATGATCGTCTTTTCAGACGCGGAAACAC 1613
Query 1614 GCCCCCGATTTCATGGCAATTGCGTTTCAGAATAGCTGCTGAGATCGCTACGGGTCTCCT 1673
||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||| |
Sbjct 1614 GCCGCCGATTTCATGGCAATTGCGTTTCAGAATCGCTGCTGAGATCGCTACGGGACTCTT 1673
Query 1674 CTTTCTCCACCAGACCAAACCAGAACCAATTGTCCACAGAGACTTGAAGCCAGGAAACGT 1733
||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1674 GTTTCTCCACCAGACCAAACCAGAGCCAATTGTCCACAGAGACTTGAAGCCAGGAAACGT 1733
Query 1734 TCTTCTCGACCACAATTACGTCAGCAAGATCAGCGATGTCGGGCTTGCAAGACTCGTCCC 1793
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1734 TCTTCTCGACCACAATTACGTCAGCAAGATTAGCGATGTCGGGCTTGCAAGACTCGTCCC 1793
Query 1794 TGCGGTAGCTGAAAACGTGACTCAGTACAGAGTAACATCAGCTGCAGGAACGTTCTGTTA 1853
|||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||
Sbjct 1794 CGCGGTAGCTGAAAACGTGACCCAGTACAGAGTAACATCAGCTGCAGGAACGTTTTGTTA 1853
Query 1854 CATCGACCCAGAGTATCAACAAACCGGAATGTTGGGTGTGAAATCAGATGTTTATTCTCT 1913
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1854 CATAGACCCAGAGTATCAACAAACCGGAATGTTGGGTGTGAAATCAGATGTTTATTCACT 1913
Query 1914 CGGAATCATGCTTTTGCAGCTTTTGACGGCGAAACAGCCGATGGGTTTGGCTTATTATGT 1973
||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1914 GGGAATCATGCTTTTGCAGCTTTTGACGGCAAAACAGCCGATGGGTTTGGCTTATTATGT 1973
Query 1974 GGAACAAGCGATAGAAGAAGGGACATTGAAAGATATGCTTGATCCTGCAGTACCGGATTG 2033
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1974 GGAACAAGCGATAGAAGAAGGGACATTGAAAGATATGCTTGATCCTGCAGTACCAGATTG 2033
Query 2034 GCCATTAGAGGAAGCTTTGTCTCTTGCGAAGTTATCGCTACAATGTGCTGAGTTGAGAAG 2093
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 2034 GCCATTAGAGGAAGCTTTGTCTCTTGCCAAGTTATCGCTACAATGTGCTGAGTTGAGAAG 2093
Query 2094 AAAAGATAGGCCTGATCTTGGTAAAGAAGTGATGCCTGAGCTTAATAGACTTAGAGAGAT 2153
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 2094 AAAAGATAGGCCTGATCTTGGTAAAGAAGTGATGCCTGAGCTTAGTAGACTTAGAGAGAT 2153
Query 2154 TGGTGAAGAGAGTCTTGAGTCTGTGTTTTATGCTGGACAAGGACGATCTTCGCATCCTAG 2213
|||||||||||||||||| ||||||| |||||||||||||||||||||||||||||||||
Sbjct 2154 TGGTGAAGAGAGTCTTGATTCTGTGTATTATGCTGGACAAGGACGATCTTCGCATCCTAG 2213
Query 2214 TCAAGTCTCTTATACATCGGTAAGAGTTTTTAATTCCAAGACATTTCCATCAGAT 2268
|||||||||||||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 2214 TCAAGTCTCTTATACATCGGTAAGAGTTTTTAATGGCAAGACATTGACATCAGAT 2268
> AT1G78940.2 | Symbols: | Protein kinase protein with adenine
nucleotide alpha hydrolases-like domain | chr1:29680822-29684161
REVERSE LENGTH=2473
Length=2473
Score = 1295 bits (701), Expect = 0.0
Identities = 1238/1492 (83%), Gaps = 58/1492 (4%)
Strand=Plus/Plus
Query 725 CTTCTCAACAAGAATCCGACCTTTCCTTCATCAGCTCCGGGAGGCCGAGTGTAGACCGAT 784
||||||| | || || ||| |||||||||||||||| || || || || || || || |
Sbjct 901 CTTCTCATCGTGACTCTGACATTTCCTTCATCAGCTCAGGAAGACCAAGCGTTGAGCGGT 960
Query 785 CTTCCTTCA-CCTACGATTTACCAGAATCAGCAAGAACCTCAAGAATGTCAACGAGCTCA 843
||||||| | ||| ||||| || ||||| ||||| || |||||||||||||||||||||
Sbjct 961 CTTCCTTTAGCCT-TGATTTTCCTGAATCTGCAAGGACTTCAAGAATGTCAACGAGCTCA 1019
Query 844 GAGCAGAGCATTGGGTCACATAGATTAGGAATCAAGTTTACG-GAT-TTGAGTTAT-CTC 900
||||| |||||||| ||| || | || ||||| ||||| | | ||| ||| || | ||
Sbjct 1020 GAGCAAAGCATTGGCTCAAATCGTTTGGGAATTAAGTTCA-GTGATCCTGA-TT-TCCTT 1076
Query 901 AATGGTTCTTCTACGGTT-TCTGATGAGAGTGGAAGAACTTCTTGTTCCTATTCATCACA 959
|| | || ||||| || ||||| |||||||| ||||| || ||||||||||| ||
Sbjct 1077 AACGAATCCTCTAC-ATTCTCTGAAGAGAGTGGTAGAACATC---CTCCTATTCATCTCA 1132
Query 960 GAGCTTGGATGATGTAGAAGCTCAAATGAGGAGACTGCGTTTAGAGCTGAAACAAACTAT 1019
||||||||||||||| |||||| |||||| ||| |||||| |||||||||||||||| ||
Sbjct 1133 GAGCTTGGATGATGTTGAAGCTGAAATGAAGAGGCTGCGTCTAGAGCTGAAACAAACCAT 1192
Query 1020 GGATATGTATAGTTCAGCTTGCAGAGAAGCTTTAACCGCAAGGC-ACGAGGCGACAGAGC 1078
|||||||||||| ||||||| | ||||||||||| ||| || | || |||| || ||||
Sbjct 1193 GGATATGTATAGCACAGCTTGTAAAGAAGCTTTAAGCGCTAGACAAC-AGGCAACGGAGC 1251
Query 1079 TGCAAAAGCTGAGGACAGAAGAGGAAAGACGATTGGAGGAA-CTAAAGATG-ACAGAGGA 1136
||||||||||||| || |||||||| ||||| ||||| ||| | ||| | | |||||||
Sbjct 1252 TGCAAAAGCTGAGAACCGAAGAGGAGAGACGGTTGGAAGAAGC-AAA-AAGTTCAGAGGA 1309
Query 1137 AATAGCAATGTCAATGGTTGAAAACGAGAGAGCAAAAGCCAAAACAGCCTTGGAAGCTGC 1196
| |||||||||||| || ||||| |||||||| ||||||||| |||| |||||||||||
Sbjct 1310 AGCAGCAATGTCAATAGTGGAAAAGGAGAGAGCTAAAGCCAAAGCAGCGTTGGAAGCTGC 1369
Query 1197 TGAAGCTGCAAACAGGCTT-GCTGAAGTGGAAGC-AAAGAGGAGGGTACAC-GCAGAGAT 1253
|||||||||||| | | || || ||||||||| | ||| | || ||| || ||||||||
Sbjct 1370 TGAAGCTGCAAAGA-GATTAGCAGAAGTGGAATCTAAA-A-GAAGGTTGACTGCAGAGAT 1426
Query 1254 GAAGGTATTGAAAGAAAGC-GATTCTTTCTCTCGACATAGCA-TTGTTCGATATAGAAAA 1311
|||| | || ||| || | ||||| |||||||| | | | ||||||| ||||| |||
Sbjct 1427 GAAGACAATG-AAGGAATCAGATTCATTCTCTCG-C---GGATTTGTTCGGTATAGGAAA 1481
Query 1312 TACACTGTTCAAGAGATCGAAGAAGGTACAGCGAACTTCGCAGAATCAAGAAAA-GTTGG 1370
||||| ||| | || |||||||||| ||| | || || ||||| || |||| || ||
Sbjct 1482 TACACGGTTGACGAAATCGAAGAAGCTACTTCAAATTTTGCAGAGTC-TCAAAAGGTAGG 1540
Query 1371 AGAAGGAGGGTATGGGCCTGTGTTTAGAGGTC-ATCTTGATCACACAAGTGTTGCTGTTA 1429
||||||||| ||||| ||||| |||||||| | ||||||||||||||||||||||||||
Sbjct 1541 AGAAGGAGGCTATGGTCCTGTCTTTAGAGG-CTTTCTTGATCACACAAGTGTTGCTGTTA 1599
Query 1430 AGGTTTTACGCCCTGACGCTGCTCAAGGAAGATCACAGTTTCACAAAGAGGTTGAGGTAT 1489
| ||| ||||||| ||||| |||||||| |||||||||||||| ||||||||||| || |
Sbjct 1600 AAGTTCTACGCCCAGACGCAGCTCAAGGGAGATCACAGTTTCAGAAAGAGGTTGAAGTGT 1659
Query 1490 TAAGCTGCATAAGGCATCCAAACATGGTGCTTCT-CTTAGGAGCTTGTCCAGAATACGGT 1548
|||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||
Sbjct 1660 TAAGCTGCATAAGGCATCCAAACATGGTGCTTCTTCTT-GGAGCTTGTCCAGAATTTGGG 1718
Query 1549 ATTCTCGTCTACGAATACATGGCCAAAGGAAGCTTAGATGACCGCCTTTTCA-GACGCGG 1607
||||| || || |||||||||||||||||||| ||||| ||||| ||||||| | || ||
Sbjct 1719 ATTCTTGTTTATGAATACATGGCCAAAGGAAGTTTAGAAGACCGGCTTTTCATG-CGAGG 1777
Query 1608 AAACACGCCCCCGATTTCATGGCAATTGCGTTTCAGAATAGCTGCTGAGATCGCTACGGG 1667
|||||| || |||||| | ||||| | ||||||||||| |||||||||||||| |||||
Sbjct 1778 AAACACACCGCCGATTACCTGGCAGCTACGTTTCAGAATCGCTGCTGAGATCGCCACGGG 1837
Query 1668 TCTCCTCTTTCTCCACCAGACCAAACCAGAACCAATTGTCCACAGAGAC-TTGAAGCCAG 1726
|||||||| ||||||||||||||||| ||||||||||||||||||||| || || ||||
Sbjct 1838 ACTCCTCTTCCTCCACCAGACCAAACCTGAACCAATTGTCCACAGAGACCTTAAA-CCAG 1896
Query 1727 GAAACGTTCTTCTCGACCACAATTACGTCAGCAAGATCAGCGATGTCGGGCTTGCAAGAC 1786
|||| ||||| ||||| |||| || || ||||||||||| ||||||||||| || |||
Sbjct 1897 GAAATGTTCTGCTCGATTACAACTATGTGAGCAAGATCAGTGATGTCGGGCTAGCGAGAT 1956
Query 1787 TCGTCCCTGCGGTAGCTGAAAACGTGACTCAGTACAGAGTAACATCAGCTGCAGGAACGT 1846
| |||||||| ||||| |||||||| || ||||||||||| || |||||||||||||| |
Sbjct 1957 TAGTCCCTGCAGTAGCGGAAAACGTTACACAGTACAGAGTCACTTCAGCTGCAGGAACTT 2016
Query 1847 TCTGTTACATCGACCCAGAGTATCAACAAACCGGAATGTTGGGTGTGAAATCAGATGTTT 1906
|||||||||| || || ||||| |||||||| ||||||||||||||||| ||||||||||
Sbjct 2017 TCTGTTACATTGATCCTGAGTACCAACAAACAGGAATGTTGGGTGTGAAGTCAGATGTTT 2076
Query 1907 ATTCTCTCGGAATCATGCTTTTGCAGCTTTTGACGGCGAAACAGCCGATGGGTTTGGCTT 1966
||||||| |||||||||||||||||| | || || || |||||||| |||||||||||||
Sbjct 2077 ATTCTCTTGGAATCATGCTTTTGCAGATCTTAACCGCAAAACAGCCAATGGGTTTGGCTT 2136
Query 1967 ATTATGTGGAACAAGCGATAGAAGAAGGGACA-TTGAAAGATATGCTTGATCCTGCAGTA 2025
|||| || ||||||||||| ||||||||||| || || |||||||||||||| ||||||
Sbjct 2137 ATTACGTTGAACAAGCGATCGAAGAAGGGACTCTT-AAGGATATGCTTGATCCAGCAGTA 2195
Query 2026 CCGGATTGGCC-ATTAGAGGAAGCTTTGTCTCTT-GCGAAG-TTATCGCTACAATGTGCT 2082
||||| ||||| || ||| |||||| | ||| || || ||| || ||||| ||||| ||
Sbjct 2196 CCGGACTGGCCTAT-AGAAGAAGCTCTATCT-TTAGCAAAGCTT-TCGCTTCAATGCGCG 2252
Query 2083 GAGTTGAGAAGAAAAGATAGGCCTGATCTTGGTAAAGA-AGTGAT-GCCTGAGCTTAATA 2140
|| | |||||||||||||| ||||| || || ||||| | | || ||||||||| |||
Sbjct 2253 GAACTAAGAAGAAAAGATAGACCTGACCTCGGGAAAGAGA-T-ATTGCCTGAGCTCAATC 2310
Query 2141 GACTTA-GAGAGATTGGTGAAGAGAGTCTT-GAGTCTGTGTTTTATGCTGGA 2190
| ||| ||||||| |||||||||||| || ||| |||||||||||| |||
Sbjct 2311 GG-TTAAGAGAGATAGGTGAAGAGAGT-TTAGAGAGTGTGTTTTATGCAGGA 2360
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 112850825160
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5