BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312743
Length=2937
Score E
Sequences producing significant alignments: (Bits) Value
AT1G17770.1 | Symbols: SUVH7, SDG17 | SU(VAR)3-9 homolog 7 | ch... 2200 0.0
AT2G24740.1 | Symbols: SDG21, SUVH8 | SET domain group 21 | chr... 1195 0.0
AT1G17780.2 | Symbols: | unknown protein; BEST Arabidopsis tha... 1013 0.0
AT2G16575.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 610 2e-173
AT2G16580.1 | Symbols: | SAUR-like auxin-responsive protein fa... 265 2e-69
AT1G73130.1 | Symbols: | unknown protein; BEST Arabidopsis tha... 132 2e-29
> AT1G17770.1 | Symbols: SUVH7, SDG17 | SU(VAR)3-9 homolog 7 |
chr1:6120741-6122822 FORWARD LENGTH=2082
Length=2082
Score = 2200 bits (1191), Expect = 0.0
Identities = 1680/1909 (88%), Gaps = 61/1909 (3%)
Strand=Plus/Plus
Query 161 CATCTGCAACATCTCCTCCTATAATGGTCTCACCTCTGCGAACCATCTGGCCATCCAACA 220
|||||||||||||||||| | |||||||| ||||||| ||||| ||||||||||||||||
Sbjct 125 CATCTGCAACATCTCCTCTTCTAATGGTCCCACCTCTTCGAACAATCTGGCCATCCAACA 184
Query 221 AGGACTGGTATGATGGAGATGCTGGTCC---TAGTACTGGTCCAATCAAACGAGAACCGT 277
|||| ||||| ||||||||||||||||| ||||||||||||||||||||||||| |||
Sbjct 185 AGGAATGGTACGATGGAGATGCTGGTCCTAGTAGTACTGGTCCAATCAAACGAGAAGCGT 244
Query 278 TCG-----A-TGATGA-A-A-CGCACAACTTATCCGCACAC-CCACCTGAAATGGTGACT 327
|| | | |||| | | | |||||| || |||| | || || |||||||| | |
Sbjct 245 CCGATAATACTAATGATACAGCACACAACACATTTGCAC-CTCCTCCAGAAATGGTCA-T 302
Query 328 -CCACTGAACACCATTAGGCCAATTGATGACTCTAACAACAATTCTAATGATGCGGGTGT 386
||||||| |||||||||||||| ||||||||||| |||| ||||| |||||||||||
Sbjct 303 ACCACTGATCACCATTAGGCCAAGTGATGACTCTAGCAACTATTCTTGTGATGCGGGTGC 362
Query 387 TGGTCTTAGCACTGTTCCAGCAAAACGAGGACGTGGCCGACCAAAAGGTTCAAAAAACTC 446
||||| ||| |||| ||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 363 TGGTCCTAGTACTGGTCCAGTAAAACGAGGCCGTGGCCGACCAAAAGGTTCAAAAAACTC 422
Query 447 AACGTCGACCGAGCGGAAGAAGACAAAAGTATATGATCCCAACAGCTTAAGGGTTACAAC 506
|||| |||| |||| ||||||| ||||||||||||||||||||||||||| |||||| |
Sbjct 423 AACGCCGACGGAGCCGAAGAAGCCAAAAGTATATGATCCCAACAGCTTAAAGGTTAC-A- 480
Query 507 TTTTCTTGGGAATTTTGATTCAGAGATAACCGACGCAGAGAGAGAAAATGGAAACCAAGA 566
| || ||||||||| ||||||||||||||||| ||||||| ||||| ||||||||| ||
Sbjct 481 -TCTCGTGGGAATTTCGATTCAGAGATAACCGAAGCAGAGACAGAAACTGGAAACCAGGA 539
Query 567 GTTAGCTGATTCAGTAATGATGCGGTTTGATGCGGTTAGACGCCGATTATGCCAACTAAA 626
| ||| |||||| || |||||||||||||||||||||||||| |||||||||||| ||||
Sbjct 540 GATAGTTGATTCCGTTATGATGCGGTTTGATGCGGTTAGACGACGATTATGCCAAATAAA 599
Query 627 CCCTACGGAAGACATCCTTGTAACGGCTAA-TACG-AATTTCACGAAATTTGGG-GTCAA 683
|| | |||||||||||||| |||||| || | | |||| ||||||| |||| |||||
Sbjct 600 CCATCCGGAAGACATCCTTACAACGGC-AAGT-GGCAATTGCACGAAA-ATGGGTGTCAA 656
Query 684 GACAAATACGAGAAGGAGAATAGGTCCAGTTCCTGGAGTACAAGTAGGAGATATATTCTA 743
||||||||| ||||||||||| ||| ||||||||||| |||| || ||||||||||||||
Sbjct 657 GACAAATACAAGAAGGAGAATTGGTGCAGTTCCTGGAATACACGTCGGAGATATATTCTA 716
Query 744 CTT-CTGGGGTGAAATGTGCTTAGTGGGGCTTCACAGA-CAAATGGTCGGCGGCATTGAT 801
|| |||||||||||||||||||||||||||||||| | ||||| | || || ||||||
Sbjct 717 -TTACTGGGGTGAAATGTGCTTAGTGGGGCTTCACAAATCAAATTAT-GGTGGTATTGAT 774
Query 802 TTTCTGACGGCTGCAGAGAGTGTAGTGGAAGGTCATGCTGCAACGAGTGTGGTCACAGCA 861
||| | |||||||||||||||| ||||||||| |||||||| | | ||||||| ||||||
Sbjct 775 TTTTTTACGGCTGCAGAGAGTGCAGTGGAAGGCCATGCTGCTATGTGTGTGGTAACAGCA 834
Query 862 GGACAATACGATGATGAAACCGATGGGCTTGA-ATCGTTGATCTATTGCGGACAGGGTGG 920
||||||||||||| ||||||||| |||||||| | |||||||||| |||||||||| ||
Sbjct 835 GGACAATACGATGGTGAAACCGAGGGGCTTGACA-CGTTGATCTACAGCGGACAGGGCGG 893
Query 921 ATCGGACAAGTCCGGTCGTGTTTTTGATCAAGAGCTGAAAGGG-GGAAATCTTGCACTGA 979
| ||||| || |||| | | |||||||||| || ||||| || ||||||||||| |
Sbjct 894 AACGGACGTGTACGGTAACGCTCGTGATCAAGAGATG-AAGGGCGGGAATCTTGCACT-A 951
Query 980 -AAGCAAGTGTAAGCAAAGGGAATGACGTTAGAGTCGTGAGGGGAGTGATGCATCCTTTT 1038
|||||||||||||||||||||||||||||||||||||||| |||||||| |||||| |
Sbjct 952 GAAGCAAGTGTAAGCAAAGGGAATGACGTTAGAGTCGTGAGAGGAGTGATACATCCTCAT 1011
Query 1039 GACAACAATCAGAAGGTATATATCTATGATGGGATTTATCTGGTTACAGAGTCCTGGACA 1098
|| |||||||||||| |||||||||| |||||||| ||||||||| || ||| |||||||
Sbjct 1012 GAGAACAATCAGAAGATATATATCTACGATGGGATGTATCTGGTTTCAAAGTTCTGGACA 1071
Query 1099 GTGACAGGAAAATCCGGTTTCATGGAGTTCAGATTCAAATTGGTAAGGAAACCAAACCAA 1158
||||||||||||||||| |||| ||||||||||||||||||||| |||||||||||||||
Sbjct 1072 GTGACAGGAAAATCCGGCTTCAAGGAGTTCAGATTCAAATTGGTGAGGAAACCAAACCAA 1131
Query 1159 CCTTCTGGTTATGCAATCTGGAAATTAGTTGAAAATTTGAGGGACAATGACTTGATTGAT 1218
||| ||| |||||||||||||||| |||||||||| ||||| || ||||||||||||||
Sbjct 1132 CCTCCTGCTTATGCAATCTGGAAAACAGTTGAAAATCTGAGGAACCATGACTTGATTGAT 1191
Query 1219 TCAAGGCCAGGTTTTATCCTTAGA-GATCTTTCTTTTGGAGCTGAGCTTTTACGAGTTCC 1277
||||||| ||||||||| ||| || |||||||||||||||||||||||||||||||||||
Sbjct 1192 TCAAGGCAAGGTTTTATACTT-GAAGATCTTTCTTTTGGAGCTGAGCTTTTACGAGTTCC 1250
Query 1278 GCTTGTTAATGAAGTCGATGAAGACGACAAAACGATTCCCGAAGATTTTGACTACATCAC 1337
||| ||||||||||| |||||||| |||||||||||||||||||||||||| |||||| |
Sbjct 1251 GCTCGTTAATGAAGTTGATGAAGATGACAAAACGATTCCCGAAGATTTTGATTACATCCC 1310
Query 1338 ATCTCAGTGTCACTCTGGTATGA---CG--T---TT-------GATCTTCAATCACTTGG 1382
|||||||||||||||||||||| || | || |||| ||||||||||||
Sbjct 1311 CTCTCAGTGTCACTCTGGTATGATGACGCATGAATTTCATTTTGATCGTCAATCACTTGG 1370
Query 1383 ATGCCAAAATTTTCAACATCAGTCATGCATTG-ATCAAAACAGCACCTGCAAGCAGAGAA 1441
|||||| |||| || ||||||| ||||||| | |||||||| |||||||| ||||||||
Sbjct 1371 ATGCCAGAATTGTCGACATCAGCCATGCAT-GCATCAAAACTGCACCTGCGTGCAGAGAA 1429
Query 1442 ACGGTGGCCTACTACCGTACCATAACAACATTTTGGTTTGTCGTAAACCGTTGATTTACG 1501
|||||| ||| |||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct 1430 ACGGTGACCTGCTACCGTACCATAACAACATTTTGGTTTGTCGTAAACCATTGATTTACG 1489
Query 1502 AGTGCGGTGGTTCTTGTCCATGCCCTAACAATTGCCCAACCAGGTTGGTTCAAACCGGCT 1561
|||||||||| |||||||| ||||| || ||||||||||| |||||||||||||||| |
Sbjct 1490 AGTGCGGTGGATCTTGTCCTTGCCCCGACCATTGCCCAACCCGGTTGGTTCAAACCGGTT 1549
Query 1562 TGAAACTCCAGTTGGAAGTGTTCAAGACAAGAAACTGTGGTTGGGGTTTAAGGTCATGGG 1621
|||||||||| ||||||||||||||||||||||||||||||||||||||| | || ||||
Sbjct 1550 TGAAACTCCATTTGGAAGTGTTCAAGACAAGAAACTGTGGTTGGGGTTTACGTTCTTGGG 1609
Query 1622 ATCCAATTCGAGCTGGAAGTTTTATCTGCGAGTTTGCCGGTGTGAGAAAGACGACGAAAG 1681
||||||| ||||| |||| |||||||||||||||||| ||| |||||||||| | ||||
Sbjct 1610 ATCCAATCCGAGCCGGAACTTTTATCTGCGAGTTTGCTGGTTTGAGAAAGAC-A--AAAG 1666
Query 1682 AAGAAGTAGAAGAGGATGATGATTACTTGTTCGACACGTCTAAGATTTATCCCAGGTTTA 1741
|||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
Sbjct 1667 AAGAAGTAGAAGAGGATGATGATTACTTGTTCGACACGTCAAAGATTTATCAGAGGTTCA 1726
Query 1742 AATGGAACTACGAACCTGAGCTTTTGCTTGGAGATTGTTGGGAGCAAGTCTCAGAATTTA 1801
||||||||||||||||||||||||||||| |||| ||||||| |||||||| |||||||
Sbjct 1727 GATGGAACTACGAACCTGAGCTTTTGCTTGAAGATAGTTGGGAACAAGTCTCTGAATTTA 1786
Query 1802 TCAATCTTCCAACACAAGTCTTGATAAGCGCCAAGGAAAACGGAAATGTTGGTCGGTTCA 1861
|||||||||||||||||||||||||||| || |||||||| || ||||||||||||||||
Sbjct 1787 TCAATCTTCCAACACAAGTCTTGATAAGTGCTAAGGAAAAAGGGAATGTTGGTCGGTTCA 1846
Query 1862 TGAACCACAGCTGTTCACCGAATGTTTTCTGGCAGCCTATAGAGTATGAAAACA-ACGGT 1920
|||| ||||| ||||||||||||||||||||||||||||| ||||||||||||| | |||
Sbjct 1847 TGAATCACAGTTGTTCACCGAATGTTTTCTGGCAGCCTATTGAGTATGAAAACAGA-GGT 1905
Query 1921 GATATATATATTCTTATTGGACTTTTTGCTATGAAGCATATTCCTCCAATGACAGAGTTA 1980
||| ||||| ||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct 1906 GATGTATATCTTCTTATCGGACTTTTTGCTATGAAGCATATTCCTCCGATGACAGAGTTA 1965
Query 1981 ACATATGACTATGGAGTTTC-TCGTGTGGAGAGGACCGAAGAAGATGAA 2028
|||||||||||||||||||| | |||||||||||| |||||||||||||
Sbjct 1966 ACATATGACTATGGAGTTTCAT-GTGTGGAGAGGAGCGAAGAAGATGAA 2013
> AT2G24740.1 | Symbols: SDG21, SUVH8 | SET domain group 21 | chr2:10529690-10531957
REVERSE LENGTH=2268
Length=2268
Score = 1195 bits (647), Expect = 0.0
Identities = 1372/1703 (81%), Gaps = 126/1703 (7%)
Strand=Plus/Plus
Query 362 ACAACAATTCTAATGATGCGGGTGTTGGTCTTAGCACTGTTCCAGCAAAACGAGGACGTG 421
||||||| |||| ||||||| ||| ||||| ||| ||| || || ||||||| || |||
Sbjct 590 ACAACAACTCTACTGATGCGAGTGCTGGTCCTAGTTCTGGTCTAGGAAAACGAAGATGTG 649
Query 422 GCCGACCAAAAGGTTCAAAAAACTCAACGTCGACCGAGCGGAAGAAGACAAAAGTATATG 481
|||||||||| |||| |||||| | | ||||| ||| |||||| |||||| | |||
Sbjct 650 GCCGACCAAAGGGTTTAAAAAA--C-AGGTCGAGAAAGCCAAAGAAGCCAAAAGCAGATG 706
Query 482 ATCCCAACAGCTTAAGGGTTACAACTTTTCTTGGGAATTTTGATTC-AGAGATAACCGAC 540
|||| || ||| || |||| | || || | || |||||||||| || |||||||||
Sbjct 707 ATCCTAATAGCAAAATGGTT--ATCTCTTGTCCGG-ATTTTGATTCAAG-GATAACCGAA 762
Query 541 GCAGAGAGAGAAAATGGAAACCAAGAGTTAGCTGATTCAG-TAATGATGCGGTTTGATGC 599
||||||||||||| |||||||| ||| ||| |||||| | | ||||||||||||| ||
Sbjct 763 GCAGAGAGAGAAAGCGGAAACCAGGAGATAGTTGATTC-GATTTTGATGCGGTTTGACGC 821
Query 600 GGTTAGACGCCGATTATGCCAACTAAACCCTA-CGG-AAGAC---ATCCTTGTAACGGC- 653
||||||||| || |||||||||||||| ||| ||| ||||| |||| | | || ||
Sbjct 822 GGTTAGACGGCGGTTATGCCAACTAAA--CTACCGGAAAGACAAGATCC-T-T-ACAGCG 876
Query 654 TAATACGAATTTCACGAAATTT-GGGGTCAAGACAAATACGA-GAAGGAGAATAGG-TCC 710
| | || |||| || | ||||| |||||| |||||| | || | |||||||| || ||
Sbjct 877 TCA-ACTAATTGCATG-AATTTGGGGGTCCGGACAAACATGACG-AGGAGAATTGGACCC 933
Query 711 AGTTCCTGGAGTACAAGTAGGAGATATATTCTACTT-CTGGGGTGAAATGTGCTTAGTGG 769
| |||| |||||||||||||| ||||||||||| || |||| |||||||||| ||||| |
Sbjct 934 A-TTCCCGGAGTACAAGTAGGTGATATATTCTA-TTACTGGTGTGAAATGTGTTTAGTCG 991
Query 770 GGCTTCACAGACAA-ATGGTC-GGCGGCATTGATTTTCTGA-CGGCTGCAGAGAGTGTAG 826
||||||||||| || | || | || ||||||||| ||| | |||| |||||||| ||
Sbjct 992 GGCTTCACAGA-AACACGG-CTGGAGGCATTGATAGTCT-ATTGGCTAAAGAGAGTGGAG 1048
Query 827 TGGAAGGTCATGCTGCAACGAGTGTGGTCACAGCAGGACAA-TACGATGATGAAACCGAT 885
|||| |||| |||||| ||||||||||| ||| ||||| || ||||| ||||||||||
Sbjct 1049 TGGATGGTCCTGCTGCTACGAGTGTGGTAACATCAGGA-AAGTACGACAATGAAACCGA- 1106
Query 886 GG-GCTTGAATCGTTGATCTATTGCGGACAGGGTGGATCGGACAAGTCCGGTCGTGTTTT 944
|| |||||| ||||||||||| ||||||| ||||| | | || | | ||
Sbjct 1107 GGATCTTGAAACGTTGATCTATAGCGGACATGGTGG-T---A-AA---C---CATG---- 1151
Query 945 TGATCAAGAGCTGA-AAGGGGGAAATCTTGCACTGA-AAGCAAGTGTAAGCAA-AGGGAA 1001
|||||||| | | || | ||||| | |||||| | ||||||||||||| || | ||||
Sbjct 1152 TGATCAAG-TTTTACAAAGAGGAAACCGTGCACT-AGAAGCAAGTGTAAG-AAGAAGGAA 1208
Query 1002 TGACGTTAGAGTCGTGAGGGGAGTGATGCATCCTTTTGACAACAATCAGAAGGTATATAT 1061
||| || |||||| | || || | || || | | | | || ||| |||||||||||||
Sbjct 1209 TGAAGTAAGAGTCATAAGAGG-G-GA-GC-T-C---T-ATAATAATGAGAAGGTATATAT 1259
Query 1062 CTATGATGGGA-TTTATCTGGT-TACAGAGTCCTGGAC-AGTGACAGGAAAATCCGGTTT 1118
||||||| ||| |||||||||| | | || | |||| | |||||||||||||||||||||
Sbjct 1260 CTATGAT-GGACTTTATCTGGTCT-CTGATTGCTGG-CAAGTGACAGGAAAATCCGGTTT 1316
Query 1119 CATGGAGT-TCAGATTCAAATTGGTAAGGAAACCAAACCAACCTTCTGGTTATGCAATCT 1177
|| ||||| | || |||||| || | ||||||||| ||||||| |||||||||||||||
Sbjct 1317 CAAGGAGTAT-AGGTTCAAACTGCTGAGGAAACCAGGCCAACCTCCTGGTTATGCAATCT 1375
Query 1178 GGAAATTAGTTGAAAATTTGAGGGA-CAATGACTTGATTGATTCAAGGCCAGGTTTTATC 1236
||||||||||||||||||||||| | | |||| ||||||||| |||| | |||||||||
Sbjct 1376 GGAAATTAGTTGAAAATTTGAGGAATC-ATGAATTGATTGATCCAAGACAAGGTTTTATA 1434
Query 1237 CTTAGAGATCTTTCTTTTGGAGCTGAGCTTTTACGAGTTCCGCTTGTTAATGAAGTCGAT 1296
||| |||||||||||||||||| ||| ||||||||||||||| |||||||||||||||
Sbjct 1435 CTTGGAGATCTTTCTTTTGGAGAAGAGGGTTTACGAGTTCCGCTCGTTAATGAAGTCGAT 1494
Query 1297 GAAGACGACAAAACGATTCCCGAAGATTTTGACTACATCACATCTCAGTGTCACTCTGGT 1356
||||| |||||||||||||| || |||||||||||||| | |||||||||| |||| |||
Sbjct 1495 GAAGAAGACAAAACGATTCCTGACGATTTTGACTACATTAGATCTCAGTGTTACTCAGGT 1554
Query 1357 ATGACGTTTGATCTTCAATCACTTGGAT-GCCAAAATTTTCAACATCAGTCATGCATTGA 1415
|||||| |||| || ||| || ||| | | || | | |||||||| |||| |
Sbjct 1555 ATGACGAATGATGTT-AAT--GTT-GATAGTC--AA-TCACTTGTTCAGTCATACATTCA 1607
Query 1416 TCAAAACAGCACCTGCAAGC-AGAGAAACGGTGGCCTA-CTACCGTACCATAACAACATT 1473
||||||| |||| |||| | | | |||| |||| | | |||| |||||| ||||||||
Sbjct 1608 TCAAAACTGCACATGCATTCTA-AAAAACTGTGGTC-AGTTACCATACCATGACAACATT 1665
Query 1474 TTGGTTTGTCGTAAACCGTTGATTTACGAGTGCGGTGGTTCTTGTCCATGCCCTAACAAT 1533
||||||||||||||||| |||||||||||||| ||||| ||||| | | |||
Sbjct 1666 TTGGTTTGTCGTAAACCATTGATTTACGAGTGTGGTGGATCTTG----T---C---CAA- 1714
Query 1534 TGCCCAACCAGGTTGGTTCAAACCGGCTTGAAACTCCAGTTGGAAGTGTTCAAGACAAGA 1593
||| | | ||||| ||||||| ||||| ||||| ||||||||||| |||||| |
Sbjct 1715 --CCCGA--A---TGGTTGAAACCGGTTTGAAGCTCCACTTGGAAGTGTTTAAGACATCA 1767
Query 1594 AACTGTGGTTGGGGTTTAAGGTCATGGGATCCAATTCGAGCTGGAAGTTTTATCTGCGAG 1653
|||||||||||||||||| | || ||||||||||| |||||||||| |||||||||||||
Sbjct 1768 AACTGTGGTTGGGGTTTACGTTCTTGGGATCCAATCCGAGCTGGAACTTTTATCTGCGAG 1827
Query 1654 TTTGCCGGTGTGAGAAAGACGACGAAAGAAGAAGTAGAAGAGGATGATGATTACTTGTTC 1713
||| | |||||||| | | ||||||||||||||||||||| ||||| || |||||||||
Sbjct 1828 TTTACTGGTGTGAG-CA-A-GACGAAAGAAGAAGTAGAAGAAGATGACGACTACTTGTTC 1884
Query 1714 GACACGTCTAAGATTTATCCCAGGTTTAAATGGAACTACGAACCTGAGCTTTTGCT-TGG 1772
|| || ||| |||||||| || || | ||||||||| ||||| ||||||||| | ||
Sbjct 1885 GATACATCTCGGATTTATCATAGCTTCAGATGGAACTATGAACCGGAGCTTTTG-TGTGA 1943
Query 1773 AGATTG-TTGGGAGCAAGTCTCAGAATTTAT-C-AATCTTCCAACACAAGTCTTGATAAG 1829
||| || ||| || |||||||| ||| || | ||||||||||| ||||||||||||||
Sbjct 1944 AGA-TGCTTGCGAACAAGTCTCTGAA--GATGCTAATCTTCCAACGCAAGTCTTGATAAG 2000
Query 1830 CGCCAAGGA-AAACGGAAATGTTGGTCGGTTCATGAACCACAGCTGTTCACCGAATGTTT 1888
||||||||| ||| |||||||||||||||||||||||||||| ||||| || |||||||
Sbjct 2001 CGCCAAGGAGAAA-GGAAATGTTGGTCGGTTCATGAACCACAACTGTTGGCCTAATGTTT 2059
Query 1889 TCTGGCAGCCTATAGAGTATGA--A-AACAACGGTGATATATATATTCTTATTGGACTTT 1945
|||||||||||||||||||||| | ||||||||| | |||||| ||| ||||||||||
Sbjct 2060 TCTGGCAGCCTATAGAGTATGATGATAACAACGGTCACATATATGTTCGCATTGGACTTT 2119
Query 1946 TTGCTATGAAGCATATTCCTCCAATGACAGAGTTAACATATGACTATGGAGTTTCTCGTG 2005
|||| |||||||| |||||||||||||||||||||||||||||||||||| ||||| |||
Sbjct 2120 TTGCGATGAAGCACATTCCTCCAATGACAGAGTTAACATATGACTATGGAATTTCTTGTG 2179
Query 2006 TGGAGAGGACCGAAGAAGATGAA 2028
|||||| ||| | |||||| |||
Sbjct 2180 TGGAGAAGACTGGAGAAGACGAA 2202
Score = 54.7 bits (29), Expect = 5e-06
Identities = 29/29 (100%), Gaps = 0/29 (0%)
Strand=Plus/Plus
Query 230 ATGATGGAGATGCTGGTCCTAGTACTGGT 258
|||||||||||||||||||||||||||||
Sbjct 38 ATGATGGAGATGCTGGTCCTAGTACTGGT 66
> AT1G17780.2 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT2G16575.1);
Has 35333 Blast hits to 34131 proteins in 2444 species: Archae
- 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants
- 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI
BLink). | chr1:6123701-6125269 FORWARD LENGTH=1289
Length=1289
Score = 1013 bits (548), Expect = 0.0
Identities = 673/731 (92%), Gaps = 17/731 (2%)
Strand=Plus/Plus
Query 2214 TTCTTCAGGATTGGATTCTGTAAAGGATGAACCAGAGAAACTTACAGAGGAACAAATGGA 2273
|||||||||||||||||||||||||||||||||||||||||| | ||||||||||||||
Sbjct 466 TTCTTCAGGATTGGATTCTGTAAAGGATGAACCAGAGAAACTCAGGGAGGAACAAATGGA 525
Query 2274 GGGAGAGGGTTTTAAGGAGAAGTTATCAGACTCTGTTTTGATTGATGAGAAGCTTGAAGA 2333
||| || ||||||||||||||||||||||||||||| ||||| |||||||||||||||||
Sbjct 526 GGGGGATGGTTTTAAGGAGAAGTTATCAGACTCTGTGTTGATAGATGAGAAGCTTGAAGA 585
Query 2334 GTACAGTGATTGTGATCAG-ACAGCAACCACTTCCCCTTGC-CCCAAAGATCCAGTATCT 2391
||||||||||||||||| | |||||||||||||||| || | | || |||||||||||||
Sbjct 586 GTACAGTGATTGTGATC-GAACAGCAACCACTTCCCGTT-CTCACACAGATCCAGTATCT 643
Query 2392 TCTCAATCTACTCACC-GCTCCCCGGAAAGCTTT-GTGACTGCAATAACATGTAATGATG 2449
|||||||||||||||| | |||||||||||||| | |||| ||||||||||| ||||||
Sbjct 644 TCTCAATCTACTCACCAG-ACCCCGGAAAGCTTTAG-GACTCCAATAACATGTGATGATG 701
Query 2450 ATACTTTTGTATCTGTCTCTGGGATTTCTAGGGGTGTTTCAAATCTAATCCCATTCGCTA 2509
||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| |
Sbjct 702 ATACTTTTGTATCTGTCTCTGGGATTTCTAGGGATGTTTCAAATCTAATCCCATTCGCGA 761
Query 2510 CAGAGACTCAAGCTTCACCTGTTCAAGACAAAGTGCCAAGCACTAGATCCTATGGCAGCA 2569
||||||||| |||||||||||||||||| ||| || ||| ||||||||||| | ||| ||
Sbjct 762 CAGAGACTCCAGCTTCACCTGTTCAAGAAAAAATGGCAAACACTAGATCCTTTAGCAACA 821
Query 2570 ACTCTATGAAAGTTAATAATCAAGATGAGTTCTTCATTGAAGACTTCGATGTTGGTCCAA 2629
||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 822 ACTCTGTGAAAG---GTAATCAAGATGAGTTCTTCATTGAAGACTTCGATGTTGGTCCAA 878
Query 2630 TGGATACCATTGATTTGTATGACATGACATTTCGAGAAGACCCCTCAGATTTTGACGACA 2689
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 879 TGGATACCATTGATTTGTATGACATGACATTTCGAGAAGACCCCTCAGATTTTGACGACA 938
Query 2690 ATTTGCTATATGCAACGCGTGACAGGACTAAGCAACTCAGATCATTCAAGAGAAAGGTAA 2749
||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||
Sbjct 939 ATTTGCTATATGCAATGCGTGACAGGACTAAGCAACTCAGATCATTCAAGAGAAAAATAA 998
Query 2750 TGGATGCTAT-AACTTCGAAAAGAAGAAGAGAGAAGGAATATGAGCAGCTTTCTATATGG 2808
|||||||||| || | |||||||||||||||||||||||||||| |||||| ||||||||
Sbjct 999 TGGATGCTATTAAAT-CGAAAAGAAGAAGAGAGAAGGAATATGAACAGCTTGCTATATGG 1057
Query 2809 TTTGGAGACGCAGACATGGGTTGTGATCTGGTAAAC-ACTAAGGAGCA-TGCTACAACAT 2866
|| ||||| ||||| ||||||||||||||||||||| | |||||| || | |||||||||
Sbjct 1058 TTCGGAGATGCAGATATGGGTTGTGATCTGGTAAACGA-TAAGGAACAGT-CTACAACAT 1115
Query 2867 CTCTAGACTCCAAAAGCTCACAGTCAAATGTGCCATTTGTATCACAAGATTCTGAGTGGG 2926
|| |||||||||||||||| ||| ||||||||||| |||||||| |||||||||||||||
Sbjct 1116 CTATAGACTCCAAAAGCTCGCAGACAAATGTGCCAGTTGTATCAGAAGATTCTGAGTGGG 1175
Query 2927 AGCTTTTGTAA 2937
|| ||||||||
Sbjct 1176 AGATTTTGTAA 1186
Score = 110 bits (59), Expect = 1e-22
Identities = 78/86 (91%), Gaps = 5/86 (6%)
Strand=Plus/Plus
Query 2030 AGGGTTTTCTTGTCTGCCCTTACCTTTCTTTCGTCCCTCTGGCCATCTTCCTCGGAAATT 2089
|||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||
Sbjct 33 AGGGTTTTCTTGTCTGCCCTTACCTTTC-CTCGTCCCTCTGGCCATCTTCCTCGGAGATT 91
Query 2090 CACTTTCATTTCATGTAA-TTCGATT 2114
|| |||| || |||||| |||||||
Sbjct 92 CATTTTC-TT--ATGTAAATTCGATT 114
> AT2G16575.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G17780.2);
Has 30201 Blast hits to 17322 proteins in 780 species: Archae
- 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants
- 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI
BLink). | chr2:7184652-7185245 FORWARD LENGTH=513
Length=513
Score = 610 bits (330), Expect = 2e-173
Identities = 389/417 (93%), Gaps = 5/417 (1%)
Strand=Plus/Plus
Query 2522 CTTCACCTGTTCAAGACAAAGTGCCAAGCACTAGATCCTATGGCAGCAACTCTATGAAAG 2581
||||||||||||||||||||||| ||| ||||||||||| | | || |||||||||||||
Sbjct 101 CTTCACCTGTTCAAGACAAAGTGGCAAACACTAGATCCTTTAGAAGTAACTCTATGAAAG 160
Query 2582 TTAATAATCAAGATGAGTTCTTCATTGAAGACTTCGATGTTGGTCCAATGGATACCATTG 2641
| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 161 -T--TAATCAAGATGAGTTCTTCATTGAAGACTTCGATGTTGGTCCAATGTATACCATTG 217
Query 2642 ATTTGTATGACATGACATTTCGAGAAGACCCCTCAGATTTTGACGACAATTTGCTATATG 2701
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 218 ATTTGTATGACATGACATTTCGAGAAGACCCCTCAGATTTTGACGATAATTTGCTATATG 277
Query 2702 CAACGCGTGACAGGACTAAGCAACTCAGATCATTCAAGAGAAAGGTAATGGATGCTATAA 2761
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 278 CAATGCGTGACAGGACTAAGCAACTCAGATCATTCAAGAGAAAGATAATGGATGCTATAA 337
Query 2762 CTTCGAAAAGAAGAAGAGAGAAGGAATATGAGCAGCTTTCTATATGGTTTGGAGACGCAG 2821
||||||||||||||||| |||||||||||||||||| |||||||||| ||||| ||||
Sbjct 338 AATCGAAAAGAAGAAGAGAAAAGGAATATGAGCAGCTTGCTATATGGTTCGGAGATGCAG 397
Query 2822 ACATGGGTTGTGATCTGGTAAACA-CTAAGGAGCATGCTACAACATCTCTAGACTCCAAA 2880
|||||||||||||||||||| ||| | ||||| ||||||||||||||| |||||||||||
Sbjct 398 ACATGGGTTGTGATCTGGTAGACAAC-AAGGAACATGCTACAACATCTATAGACTCCAAA 456
Query 2881 AGCTCACAGTCAAATGTGCCATTTGTATCACAAGATTCTGAGTGGGAGCTTTTGTAA 2937
||||| ||||||||||||||| |||||||| |||||||||| |||||||||||||||
Sbjct 457 AGCTCGCAGTCAAATGTGCCAGTTGTATCAGAAGATTCTGAATGGGAGCTTTTGTAA 513
Score = 163 bits (88), Expect = 8e-39
Identities = 98/103 (95%), Gaps = 0/103 (0%)
Strand=Plus/Plus
Query 2269 ATGGAGGGAGAGGGTTTTAAGGAGAAGTTATCAGACTCTGTTTTGATTGATGAGAAGCTT 2328
|||||||| || ||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 ATGGAGGGGGATGGTTTTAAGGAGAAGTTATCAGACTCTGTGTTGATTGATGAGAAGCTT 60
Query 2329 GAAGAGTACAGTGATTGTGATCAGACAGCAACCACTTCCCCTT 2371
||||||||||||||||||||||| ||| |||||||||||||||
Sbjct 61 GAAGAGTACAGTGATTGTGATCAAACATCAACCACTTCCCCTT 103
> AT2G16580.1 | Symbols: | SAUR-like auxin-responsive protein
family | chr2:7184422-7186968 REVERSE LENGTH=893
Length=893
Score = 265 bits (143), Expect = 2e-69
Identities = 188/209 (90%), Gaps = 6/209 (3%)
Strand=Plus/Minus
Query 2235 AAAGGATGAACCAGAGAAACTTACAGAGGAACAAATGGAGGGAGAGGGTTTTAAGGAGAA 2294
||||||||||||||||||||| | ||||||||||||||||| || ||||||||||||||
Sbjct 697 AAAGGATGAACCAGAGAAACTCAGGGAGGAACAAATGGAGGGGGATGGTTTTAAGGAGAA 638
Query 2295 GTTATCAGACTCTGTTTTGATTGATGAGAAGCTTGAAGAGTACAGTGATTGTGATCAGAC 2354
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 637 GTTATCAGACTCTGTGTTGATTGATGAGAAGCTTGAAGAGTACAGTGATTGTGATCAAAC 578
Query 2355 AGCAACCACTTCCCCTTGCCC-CAAAGATCCAGTATCTTCTCAATCTACTCACC-GCTCC 2412
| |||||||||||| || ||| || ||||||| ||||||||||||||||||||| | ||
Sbjct 577 ATCAACCACTTCCCGTT-CCCACAGAGATCCAATATCTTCTCAATCTACTCACCTGA-CC 520
Query 2413 CCGGAAAGCTTTGTGA-CTGCAATAACAT 2440
| |||||||||| || || |||||||||
Sbjct 519 CTGGAAAGCTTTA-GAACTCCAATAACAT 492
> AT1G73130.1 | Symbols: | unknown protein; BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT1G17780.2);
Has 1447 Blast hits to 774 proteins in 215 species: Archae
- 0; Bacteria - 679; Metazoa - 377; Fungi - 171; Plants - 42;
Viruses - 6; Other Eukaryotes - 172 (source: NCBI BLink).
| chr1:27499035-27502055 FORWARD LENGTH=2532
Length=2532
Score = 132 bits (71), Expect = 2e-29
Identities = 146/182 (80%), Gaps = 6/182 (3%)
Strand=Plus/Plus
Query 2661 TCGAGAAGACCCCTCAG-ATTTTGACGACAATTTGCTATATGCAACGCGTGACAGGACTA 2719
|||||||||||||| | || |||| |||| | ||| ||||| | | | ||||| |
Sbjct 2103 TCGAGAAGACCCCT-TGTATGTTGAGGACAGTGAGCTTTATGCCATTCATCTTAGGACCA 2161
Query 2720 AGCAACTCAGATCATTCAAGAGAAAGGTAATGGATGCTATAACTTCGAAA-AGAAGAAGA 2778
|| |||||||||| |||||||||||||| |||| | | ||||||| ||| |||||||||
Sbjct 2162 AGAAACTCAGATCCTTCAAGAGAAAGGTCTTGGACGTTTTAACTTC-AAAGAGAAGAAGA 2220
Query 2779 GAGAAGGAATATGAGCAGCTTTCTATATGGTTTGGAGACGCAG-ACATGGGTTGTGATCT 2837
||||||||||||||||||||| | || |||| ||||| || | | ||||||| ||||||
Sbjct 2221 GAGAAGGAATATGAGCAGCTTCCGATTTGGTACGGAGATGCGGGA-ATGGGTTCTGATCT 2279
Query 2838 GG 2839
||
Sbjct 2280 GG 2281
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 145985804130
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5