BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312838
Length=1581
Score E
Sequences producing significant alignments: (Bits) Value
AT1G18940.1 | Symbols: | Nodulin-like / Major Facilitator Supe... 2383 0.0
AT1G74780.1 | Symbols: | Nodulin-like / Major Facilitator Supe... 534 8e-151
> AT1G18940.1 | Symbols: | Nodulin-like / Major Facilitator Superfamily
protein | chr1:6543852-6545592 FORWARD LENGTH=1581
Length=1581
Score = 2383 bits (1290), Expect = 0.0
Identities = 1486/1583 (94%), Gaps = 4/1583 (0%)
Strand=Plus/Plus
Query 1 ATGGCGACGGAGATTCTGAGAACGAAATGGATGGCGATGACAGCGAGTATATGGATCCAG 60
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1 ATGGCGACGGAGATTCTGAGAACGAAATGGATGGCGATGACGGCGAGTATATGGATCCAG 60
Query 61 TGTACCGAAGGAGGTTCCTACACCTTGGGAATCTACTCCGCCATCTTAAAGTCAACTCAA 120
|||| || ||||||||| |||||||| ||||||||||| || ||||||||||||||||||
Sbjct 61 TGTAGCGCAGGAGGTTCATACACCTTCGGAATCTACTCAGCGATCTTAAAGTCAACTCAA 120
Query 121 TCTTACGACCAATCAACCCTTGATACAGTCTCCGTCTTCAAAGACATTGGTGGTAACGTC 180
|||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 121 TCTTACGATCAATCAACCCTTGATACAGTCTCCGTCTTCAAAGACATTGGAGGTAACGTC 180
Query 181 GGAGTTTTATCGGGACTTGTATACACTGCAGCTACTTTCAATCGCCGTCGCCGTGATGGA 240
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct 181 GGAGTTTTATCGGGACTTGTATACACTGCAGCCACTTTCAATCGCCGTCGCCGTGATGGA 240
Query 241 CGGGAACGTCGAGGAGGACCGTGGGTGGTGATTTTGATCGGAGCGATTTTGAACTTCACC 300
|||||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||
Sbjct 241 CGGGAACGTCGAGGAGGACCTTGGGTGGTGATTTTGATCGGAGCGATTTTGAATTTCACC 300
Query 301 GGTTATTTTCTAATGTGGGTTTCTGTTACCGGTTTAATTACACGGCCTCCGGTTCCGGTT 360
|||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||||
Sbjct 301 GGTTATTTCCTAATGTGGGCTTCTGTTACCGGTTTAATTAAACGGCCTCCGGTTCCGGTC 360
Query 361 ATGTGTCTATTTATGTTCATAGCTGCACAGTCTTTGACGTTTCTTAACACGGCAAATGTT 420
||||||||||||||||| ||||||||||||||||| |||||||||||||| || ||||||
Sbjct 361 ATGTGTCTATTTATGTTTATAGCTGCACAGTCTTTAACGTTTCTTAACACCGCCAATGTT 420
Query 421 GTGAGCTCTTTAGAGAATTTTGCTGATTATGGTGGCACTGCTGTTGGCATTATGAAGGGT 480
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 421 GTGAGCTCCTTAGAGAATTTTGCTGACTATGGTGGCACTGCTGTTGGCATTATGAAGGGT 480
Query 481 TTTGTTGGTCTAAGCGGAGCAATGTTAATTCAGCTATATGAAACCGTATGTCCTGGAGAT 540
|||||||| |||||||||||||||||||||||||| |||||| ||||||||||||||||
Sbjct 481 TTTGTTGGACTAAGCGGAGCAATGTTAATTCAGCTGTATGAAGTCGTATGTCCTGGAGAT 540
Query 541 CCAAAGACTTTTATTCTTCTACTTGCAATAGTACCTTCACTTCTCTCTGTCTTGGTGATG 600
||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||
Sbjct 541 CCAAAGACTTTTATTCTTCTACTTGCAATTGTACCTTCACTTCTCTCTGTTTTGGTGATG 600
Query 601 CCTCTAGTCAGGATATACAAGACAAGCACAGTCCATGAGAAGAAGCATTTGGATGGTTTA 660
|||||||||||| ||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 601 CCTCTAGTCAGGGTATACAAGACAAGCACAGTGGATGAGAAGAAACATTTGGATGGTTTA 660
Query 661 TCAGCTTTGTCGCTTATCATTGCAGCTTACCTTATGATTACTATTATTCTGAAGACCATT 720
||| ||||||| ||||||||||||||||||||||||||||||||||||||||||| || |
Sbjct 661 TCAACTTTGTCACTTATCATTGCAGCTTACCTTATGATTACTATTATTCTGAAGAGCACT 720
Query 721 TTAAGTTTACCATCAGGGGCCAATGCCGTCACACTTGCAGTTCTACTCGTTTTGCTTGCA 780
||||||||||||||| |||||||||| |||||||||||||||||||| ||| ||||| ||
Sbjct 721 TTAAGTTTACCATCATGGGCCAATGCTGTCACACTTGCAGTTCTACTTGTTCTGCTTTCA 780
Query 781 TCGCCTCTACTAGTAGCGGTAAGAGCACGCCGAGG-CAGTGTCGAGAAACCGTTGTCATC 839
|||||||||||||| ||||||||||||| ||| || |||| |||||||||||||||||||
Sbjct 781 TCGCCTCTACTAGTTGCGGTAAGAGCACACCG-GGACAGTATCGAGAAACCGTTGTCATC 839
Query 840 TCTTTATTCTCCTTTGGTAGACAAACTGGAAACCAA-AACCTCTGGAGAGGTTGTGGTGT 898
| ||||||||||||||||||| || |||| || ||| ||||||||||||| || || ||
Sbjct 840 TGTTTATTCTCCTTTGGTAGATAATCTGG-AAGCAACAACCTCTGGAGAGATTTTGATGC 898
Query 899 TAGATGAAGACAAAAGCTTGAATGTTTTACAAGCTATGCGTAATGTAGACTTCTGGTTGT 958
||||||||||||||||||||||| |||||||||||||| ||||||||||||| |||||||
Sbjct 899 TAGATGAAGACAAAAGCTTGAATCTTTTACAAGCTATGTGTAATGTAGACTTTTGGTTGT 958
Query 959 TGTTTCTTGCCATGATATGTGGAATGGGATCTGGAATTTCGACGATAAACAATATCAGAC 1018
|||||||||| |||||||||||||||||||| || |||||||||||||| || |||||||
Sbjct 959 TGTTTCTTGCAATGATATGTGGAATGGGATCCGGGATTTCGACGATAAATAACATCAGAC 1018
Query 1019 AAATAGGTGAGTCTCTTCGATACACTAGCGTCGAGATAAACTCATTGTTAGCTTTATGGA 1078
||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||||
Sbjct 1019 AAATAGGTGAGTCTCTTCGATACACTAGCGTTGAGATAAACTCATTGTTGGCTTTATGGA 1078
Query 1079 GTATATGGAACTTTATTGGTCGTTTTGGAGCCGGTTATGCCTCGGATTTATTGCTACACA 1138
||||||||||||||||||||| ||||||| ||||||| |||||||| ||||| ||||
Sbjct 1079 ATATATGGAACTTTATTGGTCGGTTTGGAGGTGGTTATGTCTCGGATTGGTTGCTGCACA 1138
Query 1139 GAAAAGGATGGCCGCGTCCGTTGCTAATGGCTACAACTCTTGGAACCATGACCATAGGTC 1198
||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1139 GAAAAGGATGGCCACGTCCGTTGCTAATGGCTACAACTCTTGGAACTATGACCATAGGTC 1198
Query 1199 ATCTAATCATAGCCTCTGGCTTTCAAGGAAATCTTTACCCCGGTTCGATAATCGTAGGCA 1258
||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||
Sbjct 1199 ATCTAATCATAGCCTCTGGTTTTCAAGGAAATCTTTACCCCGGTTCGATTATCGTAGGCA 1258
Query 1259 TTTGTTATGGCTCACAATGGTCGTTAATGCCAACAATTACATCAGAACTGTTCGGGGTTA 1318
||||||||||||||||||||||||||||||||||||||||||||||||| || || ||||
Sbjct 1259 TTTGTTATGGCTCACAATGGTCGTTAATGCCAACAATTACATCAGAACTATTTGGAGTTA 1318
Query 1319 AGCACATGGGCACAATCTACAACACCATTTCGATTGCTAGTCCTATGGGTTCATATATCT 1378
|||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1319 AGCACATGGGAACAATCTACAACACCATTTCAATTGCTAGTCCTATGGGTTCATATATCT 1378
Query 1379 TCTCTGTAAGATTAATTGGGTATATCTATGATCATACCATTACCGGGGAAGGTAACACGT 1438
||||||||||||| ||||| ||||||||||||| ||||||| ||| |||||||||||||
Sbjct 1379 TCTCTGTAAGATTGATTGGATATATCTATGATCGCACCATTATCGGAGAAGGTAACACGT 1438
Query 1439 GTTACGGTCCTCATTGTTTCCGATTGGCATTTGTGATCATTGCATCTGTGGCTTTCCTAG 1498
|||||||||||||||||||||||||||||| |||| | |||||||||||||||||||| |
Sbjct 1439 GTTACGGTCCTCATTGTTTCCGATTGGCATATGTGGTAATTGCATCTGTGGCTTTCCTCG 1498
Query 1499 GATTTCTTGTCTCATGTGTGTTGGTTTTTCGGACAAAGACGCTATATCGACAGATCTTCG 1558
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct 1499 GATTTCTTGTCTCATGTGTGTTGGTTTTTCGGACAAAGACGATATATCGACAGATCTTTG 1558
Query 1559 AGAAGAGGTTGCATCGTCGATAA 1581
|||||| |||||||||||||||
Sbjct 1559 AGAAGATATTGCATCGTCGATAA 1581
> AT1G74780.1 | Symbols: | Nodulin-like / Major Facilitator Superfamily
protein | chr1:28095815-28098185 FORWARD LENGTH=1976
Length=1976
Score = 534 bits (289), Expect = 8e-151
Identities = 552/677 (82%), Gaps = 26/677 (4%)
Strand=Plus/Plus
Query 917 TGAATGTTTTACAAGCTATGCGTAATGT-AGACTTCTGGTTGTTGTTTCTTGCCATGATA 975
||||| || | ||||||||| || | || |||||||||||| ||||||||||||||
Sbjct 1039 TGAATCTTCTGCAAGCTATGAAAAAACTAAG-CTTCTGGTTGTTATTTCTTGCCATGATT 1097
Query 976 TGTGGAATGGGATCTGGAATTTCGACGATAAACAATATCAGACAAATAGGTGAGTCTCTT 1035
|| |||||||| |||||| |||| ||||||||||| ||| ||||||||||||||||||||
Sbjct 1098 TGCGGAATGGGCTCTGGACTTTCAACGATAAACAACATCCGACAAATAGGTGAGTCTCTT 1157
Query 1036 CGATACACTAGC-GTCGAGATAAACTCATTGTTAGCTTTATGGAGTATATGGAACTTTAT 1094
|||||| | | | || |||||||| |||||| | | || |||||||||||||||||| |
Sbjct 1158 CGATACTC-ATCAGTTGAGATAAATTCATTGGTCTCCTTGTGGAGTATATGGAACTTTCT 1216
Query 1095 TGGTCGTTTTGGAGCCGGTTATGCCTCGGATTTATTGCTACACAGAAAA-GGATGGCCGC 1153
||| | |||||||| ||||||||||| ||| ||||||||||| |||| |||||||| |
Sbjct 1217 CGGTAGATTTGGAGCTGGTTATGCCTCAGATGCATTGCTACACA-AAAAGGGATGGCCAC 1275
Query 1154 GTCCGTTGCTAATGGCTACAACTCTTGGAACCATGACCATAGGTCATCTAATCATAGCCT 1213
|||| |||||||||||| |||| |||||||| |||| |||||| || |||||||||||||
Sbjct 1276 GTCCATTGCTAATGGCTGCAACACTTGGAACGATGAGCATAGGCCACCTAATCATAGCCT 1335
Query 1214 CTGGCTTTCAAGGAAATCTTTACCCCGGTTC-GATAATCGTAGGCATTTGTTATGGCTCA 1272
|||| |||||||||||||| || ||||| | | || || ||| |||||||||| |||
Sbjct 1336 CTGGTTTTCAAGGAAATCTCTATGTTGGTTCTG-TTATAGTTGGCGTTTGTTATGGTTCA 1394
Query 1273 CAATGGTCGT-TAATGCCAACAATTACATCAGAACTGTTCGGGGTTAAGCACATGGGCAC 1331
|| ||||| | | ||||| ||||| || || || ||||||||| || ||||||||| ||
Sbjct 1395 CAGTGGTC-TCTGATGCCTACAATCACCTCTGAGCTGTTCGGGATTCGGCACATGGGAAC 1453
Query 1332 AATCTACAACACCAT-TTCGATTGCTAGTCCTATGGGTTCATATATCTTCTCTGTAAGAT 1390
|||| ||| ||||| | || | |||||||| || ||||| |||||||||||||||||||
Sbjct 1454 CATCTTCAATACCATATCCG-TGGCTAGTCCCATTGGTTCCTATATCTTCTCTGTAAGAT 1512
Query 1391 TAATTGGGTATATCTATGATCATAC--CATTACCGGGGAAGGTAACACGTGTTACGGTC- 1447
| || || |||||||| ||| | || | || |||||||||| ||||| ||||| || |
Sbjct 1513 TGATCGGTTATATCTACGATAAGACTGC-TT-CCGGGGAAGGGAACACATGTTATGG-CT 1569
Query 1448 CTCATTGTTTCCGATTGGCATTTGTGATCATTGCATCTGTGGCTTTCCTAGGATTTCTTG 1507
||||||| ||| | || ||||| | || || |||||||| || ||| | || |||||||
Sbjct 1570 CTCATTGCTTCAGGCTGTCATTTATTATAATGGCATCTGTTGCGTTCTTTGGGTTTCTTG 1629
Query 1508 TC-TCATGTGTGTTGGTT-TTTCGGACAAAGACGCTATATCGACAGATC-TTCG-AGAAG 1563
|| ||| ||| | || |||||||||||||||||||||||||||||| || | | |||
Sbjct 1630 TCGCCAT-TGTACT-ATTCTTTCGGACAAAGACGCTATATCGACAGATCCTT-GTA-AAG 1685
Query 1564 AGGTTGCATCGTCGATA 1580
|||||||||| ||||||
Sbjct 1686 AGGTTGCATCATCGATA 1702
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 78061847475
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5