BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312939
Length=2904
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20110.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily... 2785 0.0
AT1G20120.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 983 0.0
> AT1G20110.1 | Symbols: | RING/FYVE/PHD zinc finger superfamily
protein | chr1:6971485-6974835 FORWARD LENGTH=2132
Length=2132
Score = 2785 bits (1508), Expect = 0.0
Identities = 1714/1811 (95%), Gaps = 24/1811 (1%)
Strand=Plus/Plus
Query 1 ATGCAACAGGGAGATTACAATTCGTACTATCACCACCAATACTCTCAATTTCAAAACCCA 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 70 ATGCAACAGGGAGATTACAATTCGTACTATCACCACCAATACTCTCAATTTCAAAATCCT 129
Query 61 ACTCCGAATCCTAATCC---T---AATCCTTCTCCGCCGGCACCGGCAACCGTAGCTGGT 114
||||||||||||||||| | ||||||||||||||||| ||||||||||||||||||
Sbjct 130 ACTCCGAATCCTAATCCTAATCCCAATCCTTCTCCGCCGGCGCCGGCAACCGTAGCTGGT 189
Query 115 CCGACCGATCTTTCTCGAAACACGTACGCATCAGCGCCACCGTTCACCGGCGGTTACGGT 174
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 190 CCGACCGATCTTACTCGAAACACGTACGCATCAGCGCCACCGTTCACCGGCGGTTACGGT 249
Query 175 TCCGCCGATTACTCTAACTATTCACAGAATTACACTCCGTACGGGCAAAACTCTGATCAT 234
|||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||
Sbjct 250 TCCGCCGATTACTCTAACTATTCACAGAATTACACTCCTTACGGGCAAAACTCTGAGCAT 309
Query 235 GTCCCTCCTTCAGCTCCTTCCTTCACTCCACCATCACAACCGCCTCCTCCTCCTTCTCCG 294
||||||||||||||||||||||||||| ||||||||||| |||||||||||||||
Sbjct 310 GTCCCTCCTTCAGCTCCTTCCTTCACTTCACCATCACAA------CCTCCTCCTTCTCCG 363
Query 295 CCAGCGACGTCACTAAACCCTAATTCTTATTCCACCTTCAACCAACCACCGCCTCCCCCC 354
|| ||||| ||||||||||||||||||||||| ||||||||||||||||| ||||| |||
Sbjct 364 CCGGCGACATCACTAAACCCTAATTCTTATTCAACCTTCAACCAACCACCACCTCCACCC 423
Query 355 ACGATTCATCCACCACCTCTATCCTCTTACGGATCATTTGATTCCACTGCTCCGTATCAG 414
||||||||||||| ||||||||||||||| |||||||||||||| |||||||||||||||
Sbjct 424 ACGATTCATCCACAACCTCTATCCTCTTATGGATCATTTGATTCTACTGCTCCGTATCAG 483
Query 415 CAATCTACAACAACACAACCGATGTATTATTCACCGTATGATCATCATCAAACCTCCGGC 474
||| |||| | | |||| |||||||| |||||||||||||| ||||||||||| |||
Sbjct 484 CAACCTAC--C-TCGCAACATATGTATTACTCACCGTATGATCAGCATCAAACCTCTGGC 540
Query 475 TATTCATCTGCACCTCCTCATGCTCCTCCTTCATCTGCGCCTGCGCCGAATCCTAATCAT 534
|||||||||| | | ||||||||||||||||||||||||||||||||||||
Sbjct 541 TATTCATCTG------CGC---CTCCTCCTTCATCTGCGCCTGCGCCGAATCCTAATCCC 591
Query 535 GCGCCTTACTCATCATCCTTGTACTCTGCACCTTCTTATAGTAGCGGAGGATCATCCATA 594
|||||||| |||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 592 GCGCCTTATTCATCATCCTTGTACTCTGCACCTCCTTATAGTAGCGGAGGATCATCCATA 651
Query 595 CCTCCTTCGTATGAGAAACCATCGGTGAAATTTGATCAATCTGGTTATGACGGTTATAAC 654
|||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||
Sbjct 652 CCTCCTTCGTATGAGAAACCGTCAGTGAAATTTGATCAATCTGGTTATGACGGTTATAAC 711
Query 655 CGGAGCAGATCGGATTTAGGATCTGATCTATACGGAAAACGATCTGATAGCGGAGGTTAT 714
||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 712 CGGAGCAGATCGGATTTAGGATCTGATCTATACGGAAAACGATCTGATAGCGGAGAATAT 771
Query 715 CCTGCTTTTGACGATTCTTATGGTGATGGTGTTTATGCTTATGAAGGAGGCAAAGCTGAG 774
||||||||||| ||||| ||||| ||||| |||||||||||| |||||||||||| ||||
Sbjct 772 CCTGCTTTTGAAGATTCCTATGGCGATGGCGTTTATGCTTATCAAGGAGGCAAAGTTGAG 831
Query 775 CCATACGGTTCTCGTGGAACTGCGCCGAAATCATCCAATTCGACATTGTTCGATGATTAT 834
||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||
Sbjct 832 CCATACGGTTCTCGTGGAACTGCGCCGAAATCATCGAATTCAACATTGTTCGATGATTAT 891
Query 835 GGACGATCTATTAGCTTTTCTTCTGGAGGGAGAGATTCTTCTGTTAGCTCAAATTCTGCT 894
|||||||| ||||||||||||||| |||||||||||||||||||||||| |||||||||
Sbjct 892 GGACGATCCATTAGCTTTTCTTCTTCAGGGAGAGATTCTTCTGTTAGCTCGAATTCTGCT 951
Query 895 AAGATCGTGAGAGCTGTTCCTAAAGCTGATGTGCAGGAAGATTCCAATGGTGGTGTGCAG 954
||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||
Sbjct 952 AAGATCGTGAGAGCTGTTCCTAAGGCTGATGTGCAGGAAGATTCCACTGGTGGTGTGCAG 1011
Query 955 AAATTTCGTGTCAAATTGTTGGCTGAGACTTATGGACAAACCACAACAGATGTTCTTTGC 1014
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1012 AAATTTCGTGTCAAATTGTTGGCTGAGACTTATGGACAAACCACAACAGATGTTCTTTGT 1071
Query 1015 CAGATTGGTTTGGATGGTCTCCGTATGCTTGATCCTAGTACTAGCCGGACTTTGAGAATA 1074
|||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||||
Sbjct 1072 CAGATTGGTTTGGATGGTCTTCGTATGCTTGATCCAAGTACTAGCCGAACTTTGAGAATA 1131
Query 1075 TATCCTCTTGAGAACATCACAAGATGCGAAAAACTAGATTCGTCTATTCTGGCTTTCTGG 1134
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1132 TATCCTCTTGAGAACATCACAAGATGCGAAAAACTAGATTCGTCTATTCTGGCTTTCTGG 1191
Query 1135 TCTAAGACTCCGGTAGATATTGAAGCTAGACGTATCAGACTGCAATCAAATAGTTACACC 1194
||||||||||||||||| |||||||||| |||||||||| ||||||||||||||||||||
Sbjct 1192 TCTAAGACTCCGGTAGACATTGAAGCTAAACGTATCAGATTGCAATCAAATAGTTACACC 1251
Query 1195 ACTAACACGCTTCTGGACACTGTGACTGCTGCAATGTTTCAGGCCAAAGAGATCGGAGGA 1254
|| ||||| ||||||||||||||||| |||||||||||||||||||| |||||||| |||
Sbjct 1252 ACCAACACCCTTCTGGACACTGTGACGGCTGCAATGTTTCAGGCCAAGGAGATCGGGGGA 1311
Query 1255 AGTAGCAGGCCTCCCACCTCTGGAAAACTGGTTGAACAAACTGCTGAGAAGAAAAAAGGA 1314
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1312 AGTAGCAGGCCTCCCACCTCTGGAAAACTGATTGAACAAACTGCTGAGAAGAAAAAAGGA 1371
Query 1315 TTGGGTGATTGGATGAACATTATAAAGCCTGTAAATGAGGAGAAAGATCATTGGGTGCCT 1374
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||
Sbjct 1372 TTGGGTGATTGGATGAACATTATAAAGCCTGTTAATGAGGAGAAAGATCATTGGGTACCT 1431
Query 1375 GATGAAGCTGTATCTAAGTGCACATCTTGTGGTTCAGATTTCGGTGCATTTATACGAAGG 1434
||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1432 GATGAAGCTGTTTCTAAGTGCACATCATGTGGTTCAGATTTCGGTGCATTTATACGAAGG 1491
Query 1435 CACCACTGCAGGAATTGTGGCGACGTCTTCTGTGACAAGTGTACTCAAGGCAGGATTGCT 1494
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1492 CACCACTGCAGGAATTGTGGTGACGTCTTCTGTGACAAGTGTACTCAAGGCAGGATTGCT 1551
Query 1495 CTCACTGCTGAGGATAATGCTCCTCAAGTCCGTGTTTGTGACCGGTGCATGGCAGAAGTG 1554
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1552 CTCACTGCTGAGGATAATGCTCCTCAAGTCCGTGTTTGTGACCGGTGCATGGCAGAAGTG 1611
Query 1555 TCACAAAGGTTGAGTAATTCCAAGGAAGCCACTAGCAGGAATGTGAGCTTGCAGAGCCAT 1614
|||||||||||||||||| |||||||| ||||| |||||||||||||| |||||||||||
Sbjct 1612 TCACAAAGGTTGAGTAATGCCAAGGAAACCACTGGCAGGAATGTGAGCCTGCAGAGCCAT 1671
Query 1615 GAAGACCTTGCTAGGAAGTTACAGGAGGAAATGGAGAGAAACCGCAAGTCTTCGTCTGGT 1674
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1672 GAAGACCTTGCTAGAAAGTTACAGGAGGAAATGGAGAGAAACCGCAAGTCTTCGTCTGGT 1731
Query 1675 TCGAGGGAAGGATCTGGGAGGCGGATGAAAGAAGTAGCTTGTCCAACATGCACAGTGCAC 1734
| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1732 TTGAGGGAAGGATCTGGGAGGCGGATGAAAGAAGTAGCTTGTCCAACATGCACTGTGCAC 1791
Query 1735 TTACAGGTCCAGGTTCCAATCTCAGGATCAGAGACCATTGAATGCGGAGTTTGCCAAAAC 1794
|||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||||
Sbjct 1792 TTACAGGTCCAGGTTCCAGTCTCAGGATCAGAGACCATTGAGTGCGGAGTTTGCCAAAAC 1851
Query 1795 CCTTTCCTCGT 1805
|||||||||||
Sbjct 1852 CCTTTCCTCGT 1862
> AT1G20120.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr1:6975388-6977264 FORWARD LENGTH=1466
Length=1466
Score = 983 bits (532), Expect = 0.0
Identities = 596/627 (95%), Gaps = 3/627 (0%)
Strand=Plus/Plus
Query 1897 CCAAATCCAGGGCCTGCCCCGGCACCAGAGCCTAAGCTATGTCCGAGTCCAGGGCCAAAC 1956
||||||||||||||| ||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 243 CCAAATCCAGGGCCTTCCCCGGCACCAGAGCCTAAGCCATGTCCGAGTCCAGGGCCAAAC 302
Query 1957 CCTGGACCAGTGACACCT---AGGAAACATAACACGACGTTTCCGGCGATCTTTGCCTTT 2013
|| | ||||| |||| || |||| ||||||||| ||||||||||||||||| ||||||
Sbjct 303 CCCGCACCAGCGACAACTAAGAGGACACATAACACTACGTTTCCGGCGATCTTCGCCTTT 362
Query 2014 GGGGATTCGATCTTAGACACAGGAAATAACGATTACATTTTGACATTGATTAAAGCTAAT 2073
||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||
Sbjct 363 GGGGATTCGATCTTAGACACAGGAAATAACGATTATATTTTGACCTTGATCAAAGCTAAT 422
Query 2074 TTTCTTCCATATGGCATGAATTTTCCAGATGGAGTTCCCACTGGCAGATTTTGCAACGGC 2133
|||||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||
Sbjct 423 TTTCTTCCATATGGCATGAATTTTCCAGATAAAGTTCCCACCGGCAGATTTTGCAACGGC 482
Query 2134 AAAATCCCTTCAGACTTTATAGCGGATTATTTAGGAGTAAAACCAGTTGTACCGGCATAT 2193
||||||||||| |||||||| ||||||||| |||||||||||||||||||||||||||||
Sbjct 483 AAAATCCCTTCGGACTTTATCGCGGATTATATAGGAGTAAAACCAGTTGTACCGGCATAT 542
Query 2194 TTGAGACCGGGACTGACCCAGGAAGATTTACTCACTGGTGTATCCTTTGCTTCGGGTGGT 2253
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct 543 TTGAGACCGGGACTGACCCAGGAAGATTTGCTCACTGGTGTATCCTTTGCTTCGGGTGGT 602
Query 2254 TCTGGCTACGATCCTTTGACACCTATCGTAGTAAGTGCGATATCGATGTCAAAACAATTG 2313
|||||||| |||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct 603 TCTGGCTATGATCCTTTGACACCAATCGTAGTAAGTGCGATACCGATGTCAAAACAATTG 662
Query 2314 ACATACTTTCAAGAATACATAGAGAAAGTGCAAGGCTTTGTGGGAAAAGAGAAAGCCGAG 2373
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 663 ACATACTTTCAAGAATACATAGAGAAAGTGAAAGGCTTTGTGGGAAAAGAGAAAGCCGAG 722
Query 2374 CACATAATATCCAAAGGCCTAGCCCTTGTGGTAGCGGGCAGCGACGATCTGGCTAATACC 2433
|||||||||||||||||||||||| |||||||||||||||||||||||||||| ||||||
Sbjct 723 CACATAATATCCAAAGGCCTAGCCATTGTGGTAGCGGGCAGCGACGATCTGGCCAATACC 782
Query 2434 TACTATGGTGAACACTTAGAAGAATTCTTGTATGACATCGATACATATACCTCTTTTATG 2493
|||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||
Sbjct 783 TACTATGGTGAACACTTAGAGGAATTCTTGTATGACATAGATACATATACCTCTTTTATG 842
Query 2494 GCTAGCTCTGCTGCAAGTTTCGCTATG 2520
|||||||||||||||||||| ||||||
Sbjct 843 GCTAGCTCTGCTGCAAGTTTTGCTATG 869
Score = 651 bits (352), Expect = 0.0
Identities = 374/385 (97%), Gaps = 0/385 (0%)
Strand=Plus/Plus
Query 2520 GAGAACCACAAGAGGAGGACTTACTAGAAAATGTGCTGATGAACTAAACTTTGCAGCTCA 2579
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct 941 GAGAACCACAAGAGGAGGACTTAAAAGAAAATGTGCTGATGAACTCAACTTTGCAGCTCA 1000
Query 2580 GCTTTTTAATTCCAAACTCTCCACAAGTTTGAACGAAGTGGCTAAAACCATGAAAAATAC 2639
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct 1001 GCTTTTTAATTCCAAACTCTCCACAAGTTTGAACGAATTGGCTAAAACCATGAAAAATAC 1060
Query 2640 CACATTGGTGTATATTGACATCTACTCTTCTTTCAATGATATGATTCAAAACCCCAAAAA 2699
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1061 CACATTGGTGTATATTGACATCTACTCTTCTTTCAATGATATGATTCAAAACCCCAAAAA 1120
Query 2700 ATATGGATTTGATGAGATTGATAGAGGATGTTGCGGGACGGGGCTAGTCGAATTAGGTCC 2759
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1121 ATATGGATTTGATGAGATTGATAGAGGATGTTGCGGGACGGGGCTACTCGAATTAGGTCC 1180
Query 2760 GCTTTGCAACAAATTTACTTCACTTCTTTGCAAGAATGTGTCTTCTTTTATGTTTTGGGA 2819
|||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 1181 GCTTTGCAACAAATATACATCACTTCTTTGCAAGAATGTGTCTTCTTTTATGTTTTGGGA 1240
Query 2820 CTCTTACCATCCAACGGAAAGAGCTTATAAGATCTTAAGCCAAAACTTTGTAGAGAATGA 2879
|||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||
Sbjct 1241 CTCTTACCATCCAACGGAAAGAGCTTATAAAATCTTAAGCCAAAAGTTTGTAGAGAATGA 1300
Query 2880 CATGGGCCCGTTCTATGACAAATAA 2904
||||||||| ||||||||||| |||
Sbjct 1301 CATGGGCCCTTTCTATGACAATTAA 1325
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144330295011
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5