BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312940
Length=2907
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20135.1 | Symbols: | GDSL-like Lipase/Acylhydrolase family... 1295 0.0
AT1G20132.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 1242 0.0
AT1G20130.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superf... 966 0.0
> AT1G20135.1 | Symbols: | GDSL-like Lipase/Acylhydrolase family
protein | chr1:6984124-6985498 FORWARD LENGTH=987
Length=987
Score = 1295 bits (701), Expect = 0.0
Identities = 766/798 (96%), Gaps = 2/798 (0%)
Strand=Plus/Plus
Query 2095 GCTCAAACTGGAAGATTTTCAGCGGTTCTTGCATTTGGAGATTCGATTCTCGATACCGGT 2154
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||| |||
Sbjct 64 GCTCAAACTGGAACATTTTCAGCAGTTCTTGCATTTGGAGATTCGATTCTCGATACTGGT 123
Query 2155 AACAACAATTTGCTCATGACAGTGTCAAGAGGCAACTTTTTGCCATATGGACGCGATTTT 2214
||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct 124 AACAACAATTTGCTCATGACAGTATCAAGAGGCAATTTTTTGCCATATGGACGCGATTTT 183
Query 2215 CCTAATCGTATTCCTACCGGAAGATTCGGGAATGGAAGAGTTCTATCAGATTTAGTTGCG 2274
||| ||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct 184 CCTCATCGTATTCCTACAGGAAGATTCGGGAATGGAAGAGTTCTATCAGATTTAGTTGCC 243
Query 2275 GGCGGTTTAGGGGTAAAAGATCTTTTACCTGCCTTCCGGAGCCCATTTCTTAAAAGTAGT 2334
||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||
Sbjct 244 AGCGGTTTAGGGGTAAAAGATCTTTTACCTGCTTTCCGGAGCCCATTTCTTAAAAATAGT 303
Query 2335 GAACTCGCTACCGGTGTTTGTTTTGCGTCCGGAGGTTCAGGGTTAGACAAATTCACTGCA 2394
|||||||||||||| ||||||||||| ||||| |||||||||||||||||||||||||||
Sbjct 304 GAACTCGCTACCGGCGTTTGTTTTGCATCCGGTGGTTCAGGGTTAGACAAATTCACTGCA 363
Query 2395 TCTATACAGGGGGTTATATGGGTACAAGATCAGGTGAATGACTTTCAAAGATA-TATAGA 2453
||||||||||||||||||||||||||||||||||||| ||||||||||||||| | ||||
Sbjct 364 TCTATACAGGGGGTTATATGGGTACAAGATCAGGTGAGTGACTTTCAAAGATACT-TAGA 422
Query 2454 AAAATTAAACCAACAAGTTGGAGATCCAGCTAAAGTCAAAGAGATTATAGCCAATGCTGT 2513
||| ||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 423 AAAGTTAAACCAACAAGTTGGAGATGCAGCTAAAGTCAAAGAGATTATAGCCAATGCTGT 482
Query 2514 GATTCTAGTTTCTGCTGGTAATAACGATCTTGCCATCACATATTTTTCAACTCCGAAGAG 2573
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 483 GATTCTAGTGTCTGCTGGTAATAACGATCTTGCCATCACATATTTTTCAACTCCGAAGAG 542
Query 2574 ACAAACAAGATACACTGTCCAAGCATACACTGATATGCTCATCGGTTGGAAAACTACCTT 2633
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 543 ACAAACGAGATACACTGTCCAAGCATACACTGATATGCTCATCGGTTGGAAAACTACCTT 602
Query 2634 CATGAATAGTCTATATGATTTGGGAGCTAGAAAATTTGCAATTCTTGGAACGTTACCGTT 2693
||| ||||||||||||||| | ||||||||||||||||||||||||||||||||||||||
Sbjct 603 CATAAATAGTCTATATGATCTAGGAGCTAGAAAATTTGCAATTCTTGGAACGTTACCGTT 662
Query 2694 AGGGTGTTTGCCAGGGGCGAGACAAATTACCGGAAATTTGATATGTCTTCCGAATGTAAA 2753
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 663 AGGGTGTTTGCCAGGGGCGAGACAAATTACCGGAAATTTGATATGTCTTCCGAATGTAAA 722
Query 2754 CTATGGTGCTAGAGTATATAATGAAAAAGTAGCGAACTTGGTCAACCAATACAGCCAAAG 2813
||||||||||||||| |||||||| |||||||| ||||||||||| || |||| ||||||
Sbjct 723 CTATGGTGCTAGAGTTTATAATGACAAAGTAGCTAACTTGGTCAATCAGTACAACCAAAG 782
Query 2814 GCTTCCCAATGGCAAATTCGTCTACATTGATATGTATAACTCACTTCTTGAAGTCATCAA 2873
||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct 783 GCTTCCCAATGGCAAATTCGTCTACATCGATATGTATAACTCACTTCTTGAGGTCATCAA 842
Query 2874 TAATCCTAGCCAATACGG 2891
||||||||||||||||||
Sbjct 843 TAATCCTAGCCAATACGG 860
> AT1G20132.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr1:6981264-6983627 FORWARD LENGTH=1378
Length=1378
Score = 1242 bits (672), Expect = 0.0
Identities = 740/774 (96%), Gaps = 0/774 (0%)
Strand=Plus/Plus
Query 1322 TGTTTTTCTTTGGGGATTCGATCATAGATACGGGAAATAACAATAATCTAACAACAGAAA 1381
||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||
Sbjct 279 TGTTTTTCTTTGGGGATTCGATCATAGATACAGGAAATAATAATAATCTAACAACAGAAA 338
Query 1382 TGAAATGTAATTTTAGTCCTTATGGTATGGATTTTCCGCTCGGAGTTGCAACTGGTAGAT 1441
||||||||||||||||||||||||||| ||||||||| ||||||||||||||||||||||
Sbjct 339 TGAAATGTAATTTTAGTCCTTATGGTAAGGATTTTCCACTCGGAGTTGCAACTGGTAGAT 398
Query 1442 TCAGCAACGGAAAGGTCGTTTCCGATTATATATCTGAATATTTGGGAGTAAAACCAATTG 1501
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 399 TCAGCAACGGAAAGGTCGTTTCCGATTATATATCTGAATATTTGGGAGTAAAACCAATTG 458
Query 1502 TACCAGCATATTTTGACCCCAATGTACAACTAGAAGATCTTCTCACCGGTGTATCATTTG 1561
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 459 TACCAGCATATTTTGACCCCAATGTACAACTAGAAGATCTTCTCACGGGTGTATCATTTG 518
Query 1562 CTTCAGGTGGTAGTGGCTATTACCATTTGACACCCAGAATATCTAGAGTAAAGTCAATGT 1621
||||||||||||||||||||||||||||||| |||| |||||| ||||||||||||||||
Sbjct 519 CTTCAGGTGGTAGTGGCTATTACCATTTGACTCCCAAAATATCCAGAGTAAAGTCAATGT 578
Query 1622 TGGACCAATTGACATATTTCCAACGACACATATCGAGAGTAAAGAGGTTAATTGGGCAAG 1681
|||| ||||||||||||||||||||||||||| ||||||||||||||||| | ||| |||
Sbjct 579 TGGAGCAATTGACATATTTCCAACGACACATAGCGAGAGTAAAGAGGTTAGTAGGGGAAG 638
Query 1682 ACAAGACCGATCAATTGTTAGCCAAGGGATTATCTGTTGTGGTCGCCGGCAGCAACGATT 1741
| ||||| |||||| ||||||||||||| ||||| ||||||||||| |||||||||||||
Sbjct 639 AGAAGACGGATCAACTGTTAGCCAAGGGCTTATCCGTTGTGGTCGCAGGCAGCAACGATT 698
Query 1742 TGGCTATTACATACTATGGTCAAGGTGCTCAATTGCTCAAAGACGATATTCACTACTTTA 1801
||||||||||||| |||||||| |||||||||||||||||||| ||||| ||||||||||
Sbjct 699 TGGCTATTACATATTATGGTCATGGTGCTCAATTGCTCAAAGATGATATCCACTACTTTA 758
Query 1802 CTTCAAAGATGGCTAATTCTGCCGCAAGTTTTGTTATGCAATTATATGAATATGGAGCAA 1861
||||||||||||| ||||| || ||||||||||||||||||||||| |||||||||||||
Sbjct 759 CTTCAAAGATGGCAAATTCCGCGGCAAGTTTTGTTATGCAATTATACGAATATGGAGCAA 818
Query 1862 GACAAATAGCAGTTCTAGGAACACCACCACTTGGCTGCGTACCAATACTAAGAACTCTAA 1921
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 819 GACAAATAGCAGTTCTAGGAACACCACCACTTGGCTGCGTACCAATACTAAGAACTCTAA 878
Query 1922 AAGGAGGTCTTCGTAGAAATTGTGCTCAAGATATAAACTATGCTTCTCAGCTTTTCAACG 1981
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct 879 AAGGAGGTCTTCGTAGAGAGTGTGCTCAAGATATAAACTATGCTTCTCAGCTTTTCAACG 938
Query 1982 TCAAACTGTCCATCACTTTGGACCAATTGGCAAAAAACCTACCAAATTCCAATCTCATTT 2041
||||||| |||| || ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 939 TCAAACTCTCCAACATTTTGGACCAATTGGCAAAAAACCTACCAAATTCCAATCTCATTT 998
Query 2042 ACATTGACATATACTCTGCTTTCAGTCACATCTTGGAAAATTCTGCAGATTATG 2095
|||||||||||||||||||||||||||||||||| |||||||| ||||||||||
Sbjct 999 ACATTGACATATACTCTGCTTTCAGTCACATCTTAGAAAATTCAGCAGATTATG 1052
> AT1G20130.1 | Symbols: | GDSL-like Lipase/Acylhydrolase superfamily
protein | chr1:6977885-6980241 FORWARD LENGTH=1897
Length=1897
Score = 966 bits (523), Expect = 0.0
Identities = 670/734 (91%), Gaps = 38/734 (5%)
Strand=Plus/Plus
Query 1 ATGAATCCACCAGCACCTGACCCATCACCAAAGCCT-TCCCCACCACCTGGCCCATCACC 59
|||||||||||| ||||||||||||||||||||||| | | ||||||||||||||||| |
Sbjct 226 ATGAATCCACCAACACCTGACCCATCACCAAAGCCTGT-CGCACCACCTGGCCCATCATC 284
Query 60 AAAACCTGTCGcaccaccaggcccatctccatgcccatcaccaccaccaaagcctcaacc 119
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct 285 AAAACCTGTCGCACCACCAGGCCCATCTCCATGCCCGTCACCACCACCAAAGCCTCAACC 344
Query 120 caagccaccaccagcacctagcccatctccatgcccatcaccaccacctaagcctcaacc 179
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 345 CAAGCCCCCACCAGCACCTAGCCCATCTCCATGCCCATCACCACCACCTAAGCCTCAACC 404
Query 180 aaagccagcag-caccaccagcatgcccaccaaca---cc---accT-------A---AG 222
|||||||| | ||||||||||||||||||||||| || |||| | ||
Sbjct 405 AAAGCCAG-TGCCACCACCAGCATGCCCACCAACACCTCCTAAACCTCAACCGAAGCCAG 463
Query 223 -----CC-TC--Aaccaaagccagcgccaccgccagcaccaaagccag-cgccatgtcca 273
|| | ||||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct 464 CACCACCGCCAGAACCAAAGCCAGCGCCACCACCAGCACCAAAGCCAGTC-CCATGTCCA 522
Query 274 tcaccacctaagccaccaGTCCCAACTCCAAAGCCTGTGCCACCACATGGCCCACCTCCA 333
||||||||||||||||||| |||||||||||||||||| ||||||||||| |||||||||
Sbjct 523 TCACCACCTAAGCCACCAGCCCCAACTCCAAAGCCTGTCCCACCACATGGTCCACCTCCA 582
Query 334 AAACCTGCTCCAGCACCAACGCCTGCCCCCTCGCCAAAACCTGCCCCATCACCACCTAAG 393
||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct 583 AAACCTGCTCCAGCACCAACGCCTGCCCCTTCCCCAAAACCTGCCCCATCACCACCTAAG 642
Query 394 CCAGAGAACAAAACCATACCAGCCGTGTTTTTCTTTGGGGATTCCGTCTTCGACACAGGA 453
|||||||||||||| ||||| ||||||||||||||||| ||||| ||||| |||||||||
Sbjct 643 CCAGAGAACAAAACTATACCGGCCGTGTTTTTCTTTGGCGATTCAGTCTTTGACACAGGA 702
Query 454 AATAACAATAATCGAGAAACAAAGATAAAAAGTAATTATCGTCCTTATGGTATGGA-TTT 512
||||||||||||| |||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct 703 AATAACAATAATCTAGAAACAAAGATAAAAAGTAATTATCGTCCCTATGGTATGGACTTT 762
Query 513 CAAATTCGGAGTTGCCACTGGTAGATTCAGCAATGGAATGGTTGCTTCCGATTATTTATG 572
|||||| ||||||| |||||||||||||||||||||||||||||||||||||||||| |
Sbjct 763 -AAATTCAGAGTTGCAACTGGTAGATTCAGCAATGGAATGGTTGCTTCCGATTATTTA-G 820
Query 573 TACCCAAATACATGGGAGTAAAAGAAACTGTACCGGCATATTTGGACCC-AAAAGTACAA 631
|| |||||||||||||||||||||| ||||||||||||||| ||||| |||| |||||
Sbjct 821 --CC-AAATACATGGGAGTAAAAGAAATTGTACCGGCATATTTAGACCCGAAAA-TACAA 876
Query 632 CCAAACGATCTTCTTACGGGCGTATCTTTTGCATCGGGTGGTGCTGGCTACAATCCTACG 691
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 877 CCAAACGATCTTCTTACGGGAGTATCTTTTGCATCGGGTGGTGCTGGCTACAATCCTACT 936
Query 692 ACATCCGAAGCAGC 705
||||||||||||||
Sbjct 937 ACATCCGAAGCAGC 950
Score = 785 bits (425), Expect = 0.0
Identities = 456/471 (97%), Gaps = 2/471 (0%)
Strand=Plus/Plus
Query 783 CAATGATCTGATCATTACATATTTTGGAAGTGGTGCTCAACGACTCAAAAATGACATAGA 842
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1110 CAATGATCTGATCATTACATATTTTGGAAGTGGTGCTCAACGACTCAAAAATGACATCGA 1169
Query 843 CTCTTATACCACTATCATTGCTGATTCTGCCGCCAGTTTCGTTTTGCAATTGTATGGGTA 902
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct 1170 CTCTTATACCACTATCATTGCTGATTCTGCCGCCAGTTTCGTTTTGCAATTGTATGGATA 1229
Query 903 TGGAGCAAGACGTATTGGAGTGATCGGAACACCACCACTTGGATGTGTACCATCACAAAG 962
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1230 TGGAGCAAGACGTATAGGAGTGATCGGAACACCACCACTTGGATGTGTACCATCACAAAG 1289
Query 963 ATTAAAGAAAAAGAAAATATGCAATGAAGAGCTTAATTATGCTTCTCAGCTTTTCAATTC 1022
| ||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct 1290 ACTAAAGAAAAAGAAAATATGCAATGAAGAGCTAAACTATGCTTCTCAGCTTTTCAATTC 1349
Query 1023 CAAGCTCCTTCTTATTTTGGGTCAATTGTCAAAAACCCTACCAAATTCTACACTT-GTTT 1081
|||||||| |||||||||||||||||||||||||||||||||||||||||| || ||||
Sbjct 1350 TAAGCTCCTCCTTATTTTGGGTCAATTGTCAAAAACCCTACCAAATTCTACA-TTCGTTT 1408
Query 1082 ATATGGACATCTACACTATCTTCAGTCAGATGCTAGAAACTCCTGGGGCTTATGGATTTG 1141
|||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct 1409 ATATGGACATCTACACTATCATCAGTCAGATGCTAGAAACTCCTGCGGCTTATGGATTTG 1468
Query 1142 AGGAGACAAAGAAACCGTGTTGCAAAACAGGATTATTAAGCGGAGGTGCCCTCTGCAAGA 1201
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1469 AGGAGACAAAGAAACCGTGTTGCAAAACAGGATTATTAAGCGCAGGTGCCCTCTGCAAGA 1528
Query 1202 AGGCTACATCGAAAATCTGTCCCAATACATCGTCTTATTTGTTTTGGGACG 1252
|| |||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct 1529 AGTCTACATCGAAAATCTGTCCCAATACATCGTCTTACTTGTTTTGGGACG 1579
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 144480795840
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5