BLASTN 2.2.26+ Reference: Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14. Database: TAIR10_cdna_20110103_representative_gene_model_updated 33,602 sequences; 51,074,197 total letters Query= Ahg312968 Length=1839 Score E Sequences producing significant alignments: (Bits) Value AT1G20530.1 | Symbols: | Protein of unknown function (DUF630 a... 2793 0.0 > AT1G20530.1 | Symbols: | Protein of unknown function (DUF630 and DUF632) | chr1:7108370-7110377 REVERSE LENGTH=1845 Length=1845 Score = 2793 bits (1512), Expect = 0.0 Identities = 1741/1851 (94%), Gaps = 18/1851 (1%) Strand=Plus/Plus Query 1 ATGGGTTGCTCCCCCTCAAAGCTCGACGGTTTACCGGCCGTCTCTCTATGCCGTGACCGC 60 ||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||| Sbjct 1 ATGGGTTGCTCCCCCTCCAAGCTCGACGGTTTACCGGCCGTATCTCTATGCCGTGACCGC 60 Query 61 TGCAACTCACTAGAAGACACTCTCCGGCGAAGCTACGCCTTAGCCGACGCTCACTCAGCT 120 |||| |||||| ||||| || ||||||||||||||||||||||||||||||||||||||| Sbjct 61 TGCAGCTCACTCGAAGATACGCTCCGGCGAAGCTACGCCTTAGCCGACGCTCACTCAGCT 120 Query 121 TATCTCCTCTCTCTAAACACCGTCGGTCCTGCTCTTCATAGATTCTTCCAACAAGCCGTC 180 |||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| |||||| Sbjct 121 TATCTCCTTTCTCTGAACACCGTCGGTCCAGCTCTCCATAGATTCTTCCAACATGCCGTC 180 Query 181 GAGTCTCCACCAGATGTTGAATCCGAAGCCGACCAATCCCCGGAGACGTATTCGCCGGAA 240 |||||||| || ||||||||||||||||| ||| |||| |||||||||||||| |||||| Sbjct 181 GAGTCTCCGCCGGATGTTGAATCCGAAGCTGACGAATCACCGGAGACGTATTCTCCGGAA 240 Query 241 TCCTCTT-CTCCATCTCACTCCGTTACCAGTTCAGATTCCGATTCGCCTCCCAAATTCGA 299 |||| || || | ||||||| ||||||||||| |||||||||| ||||||||| ||||| Sbjct 241 TCCTGTTCCT-CGGCTCACTCGGTTACCAGTTCTGATTCCGATTTGCCTCCCAAGTTCGA 299 Query 300 TTCGGATTGTGAGGAAGAAGATGAAGGTACGAATTGCGATCTTTTCAGCTGTCCAAAA-C 358 ||||||||||||||||| | ||||||||||||||||||||| || ||| || ||||| | Sbjct 300 TTCGGATTGTGAGGAAG--G-TGAAGGTACGAATTGCGATCTCTTAAGCGGTTCAAAACC 356 Query 359 TCGAATCACTAAATCTTAATCATGACTCGTTTTACTCCCGGAGATACGAATCCGGCACCA 418 | ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||| Sbjct 357 T-GAATCTCTAAATCTTAATCATGACTCGTTCTACTCCCGGAGATACGAATCCGGCACCA 415 Query 419 TAACGCCGCCTCCACCGCCGCCGGCTCCGAGTAATTACGCTTGGGATTTTATCAATTTCT 478 ||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||| Sbjct 416 TAACGCCGCCTCCTCCACCGCCGGCTCCGAGTAATTACGCTTGGGATTTTATCAATTTCT 475 Query 479 TCGAGAACTATGAGTTTCCGTACATTACGAATGCCAAAGATTTGAAAGATAGAGAGACCA 538 |||||| ||||||| ||||||||| |||| ||| ||| |||||||| ||||||||||||| Sbjct 476 TCGAGAGCTATGAGCTTCCGTACACTACGGATGTCAATGATTTGAAGGATAGAGAGACCA 535 Query 539 CTCGTTTTCATGAAGAAGATAAGTTGACGAAGAAGAAGATTACTGTGAGCC-aaa--at- 594 ||| || |||||||||||||||||||| ||||||||||||||||||||||| ||| || Sbjct 536 CTCCTTCTCATGAAGAAGATAAGTTGAAGAAGAAGAAGATTACTGTGAGCCAAAACGATG 595 Query 595 -----attaaaataaaagaagagaagaaaactctgagaatctcaaagaaaaataggaaga 649 |||||| || |||||||||| |||||||||||||||||| |||||||||||||| Sbjct 596 AGAAGATTAAAGTAGAAGAAGAGAAAAAAACTCTGAGAATCTCAGAGAAAAATAGGAAGC 655 Query 650 GTGCTCCTAAAGAATCAAAGAATCATAAAGTTTCATCAGATTTCTCTGAAGTCACAAAGC 709 |||||||||||||||||||| |||| ||||||||||||||||| |||||||| ||||||| Sbjct 656 GTGCTCCTAAAGAATCAAAGGATCAAAAAGTTTCATCAGATTTATCTGAAGTAACAAAGC 715 Query 710 AATTGCAAGAAATGTTCAAGAAAGCTTCAGAATCAGGGAATGATGTTTCGAAGATGTTCG 769 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 716 AATTGCAGGAAATGTTCAAGAAAGCTTCAGAATCAGGGAATGATGTTTCGAAGATGTTTG 775 Query 770 ACACTTCCAGATTCAGATACTACCAGAAAAGCTCTGTTTATCAATGTAATGTTCGAGTTC 829 |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 776 ACACTTCCAGATTCAGATACTACCAGAAAAGCTCTGTTTATCAATGTAATGTTCGAATTC 835 Query 830 TTCTTCCTTCTTCAAACATTCTCTACACGAAGAAGGTGATGACTCCATTTGATCCCAAAC 889 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 836 TTCTTCCTTCTTCAAACATTCTCTACACGAAGAAGGTGATGACTCCATTTGATCCCAAAC 895 Query 890 CAGTGGAAGAATCTGATTTCAATAATCTTTCATCTACTCTGAAGAAACTATTT-ATGTGG 948 |||||||||||||| |||||||||||||||||||||||||||||||||| ||| |||||| Sbjct 896 CAGTGGAAGAATCTAATTTCAATAATCTTTCATCTACTCTGAAGAAACT-TTTCATGTGG 954 Query 949 GAGAAGAAACTGTACCAAGAAGTAAAGGCTGAGGAGAAACTCCGAACTTCTCACATGAAG 1008 ||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 955 GAGAAGAAACTGTACCAAGAAGTAAAGGCTGAGGAGAAACTCCGAACATCTCACATGAAG 1014 Query 1009 AACTACAAACAACTGAGGAGATTGGAAGCAAAAAGTGCAGATCTAAGCAAAGTTGAAGTT 1068 |||||||||| | |||||||||||||||||||||||||||||||||||||| | |||| | Sbjct 1015 AACTACAAACTATTGAGGAGATTGGAAGCAAAAAGTGCAGATCTAAGCAAAATCGAAGCT 1074 Query 1069 ATTCGTTCTTCGGTTCAGTGTTTGTCTACAAGAATGAGAGTCTCTATCCATAAGATAAAC 1128 |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||| Sbjct 1075 ATTCGTTCTTCGATTCAGTGTTTGTCTACAAGAATGAGAGTTTCTATCCATAAGATAAAC 1134 Query 1129 AACATTTGTCTGACGATAAACAAGTTACGCGATGAAGAGCTCTGGTCCCAAATGAAAGAA 1188 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1135 AACATTTGTCTGACGATAAACAAGTTACGCGATGAAGAGCTCTGGTTCCAAATGAAAGAG 1194 Query 1189 TTGATCCACAGGTTGTCTGTGATGTGGAGCTCTATGCTAGAATGTCACAGGAGACAATCT 1248 ||||||||||||||||||| |||||||| ||||||||||||||||||||| ||||||||| Sbjct 1195 TTGATCCACAGGTTGTCTGAGATGTGGAACTCTATGCTAGAATGTCACAGTAGACAATCT 1254 Query 1249 AAAGTGATCGCAGAGGCTAAGAAGCTTGATAAGATGACAATAAAGGAGAATCTAGACTTA 1308 ||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1255 AAAGTAATTGCAGAGGCTAAGAAGCTTGATAAGATGACAATAAAGGAGAATCTAGACTTA 1314 Query 1309 TCTCAGCTTGAGCTTGCTATGGAATTGAAACTGGAGTTGAGGAACTGGAGCCTAAGCCTG 1368 |||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || Sbjct 1315 TCTCAGCTTGAGCTTGCTATGGAATTGAAACTGGAGTTGAGGAACTGGAGTCTAAGCATG 1374 Query 1369 TCCAACTGGATAGACGCTCAGGCTCAGTATGTTAAAGCTTTGAACAGTTGGCTAATGCGA 1428 || ||||||||||| ||||||||||||||||||||||| ||||||| ||||||||||||| Sbjct 1375 TCGAACTGGATAGATGCTCAGGCTCAGTATGTTAAAGCCTTGAACAATTGGCTAATGCGA 1434 Query 1429 TATTTAAAGCAAGAACCTCAAGTACCAACACCAGATCTCTCAGAAGAGCCACCATTGTTT 1488 | |||||| || |||||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 1435 TGTTTAAAACAGGAACCTCAAGAACCAACACCAGATCTCTCAGAAGAGCCACCATTGTTT 1494 Query 1489 GGTGCTATTAACACTTGGTCACAAACCCTTGAGAGATCACACGGAGAGAAGGAGTTTACG 1548 ||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||| Sbjct 1495 GGTGCTATTAACACTTGGTCACAAAACCTTGAGATATCACACGGAGAGAAGGAGTTTACA 1554 Query 1549 GAAGCGGTTTACACGATTTTGATGCATGTAAACCGTCAGGTTGAGAAACAGAGGATGGAA 1608 |||||||||||||||||||||||||| ||||||| |||||| |||||||||||||||||| Sbjct 1555 GAAGCGGTTTACACGATTTTGATGCACGTAAACCATCAGGTGGAGAAACAGAGGATGGAA 1614 Query 1609 TTGGAAGAGCAGAGGAATGTTAATGGTAGCGTAAAGGATATAGAGAGGAAGCTCATGATG 1668 |||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||| Sbjct 1615 TTGGAAGAGCAGAGGAATGTTAATGGCAGCGTAAAGGATATAGAAAGGAAGCTTATGATG 1674 Query 1669 TTAGAGAAGGAAGAGCAGAAGATGCAGAGGAAGATGAAGACAGTACCATCTGTTGAATTA 1728 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 1675 TTAGAGAAGGAAGAGCAGAAGATGCAGAGGAAGATGAAGACAGTACCATCTGTTGCATTA 1734 Query 1729 GTGGGGAGTTTAAATCTGAAGTCTAACATGGAACAGATATTCAAATCTATGGAGAAATTA 1788 |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||| Sbjct 1735 ATGGGGAGTTTAAATCTGAAGTCTAACATGGAACAGATATTCAAATCGATGGAGAAATTA 1794 Query 1789 GCTACAAACTCAAAGCAGACTTATGAGGAACTTGACTTGATGTGCACGTAA 1839 ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1795 GCTACAAACTCAAAGCAGACTTATGAGGAACTTGACTTGATGTGCACGTAA 1845 Lambda K H 1.33 0.621 1.12 Gapped Lambda K H 1.28 0.460 0.850 Effective search space used: 91013588085 Database: TAIR10_cdna_20110103_representative_gene_model_updated Posted date: Sep 25, 2014 6:13 PM Number of letters in database: 51,074,197 Number of sequences in database: 33,602 Matrix: blastn matrix 1 -2 Gap Penalties: Existence: 0, Extension: 2.5