BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg312970
Length=1707
Score E
Sequences producing significant alignments: (Bits) Value
AT1G20550.1 | Symbols: | O-fucosyltransferase family protein |... 2676 0.0
AT1G76270.1 | Symbols: | O-fucosyltransferase family protein |... 1328 0.0
> AT1G20550.1 | Symbols: | O-fucosyltransferase family protein
| chr1:7115241-7118161 REVERSE LENGTH=2164
Length=2164
Score = 2676 bits (1449), Expect = 0.0
Identities = 1626/1710 (95%), Gaps = 18/1710 (1%)
Strand=Plus/Plus
Query 1 ATGGCTTTTCAGCGGCGGCGCTACAATTACTACAACCGTCTCCGTCTTCTCCTCCCTTTA 60
||||||||||| ||||||||| |||||||||||||||||||||||| ||| || |||||
Sbjct 226 ATGGCTTTTCAACGGCGGCGCAACAATTACTACAACCGTCTCCGTCGTCTTCTTCCTTTC 285
Query 61 ATTTGCGCCGTCTCTGGAGCTCTCCTTATCCTCTTCGCTCTTCTCTCCATTCTTTCCCCT 120
|||||||| |||||||||||||| || |||||||||||||||||||||||||||||||||
Sbjct 286 ATTTGCGCTGTCTCTGGAGCTCTTCTCATCCTCTTCGCTCTTCTCTCCATTCTTTCCCCT 345
Query 121 CCTCCTGATGATTCCGATCGCCGCATCTCCAAGCAGATTCACTATGGAGCCAATGATGAG 180
||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||||||
Sbjct 346 CCTCCTGATGATTCCGATCGCCGCATCTCCAAGCATATTAACTATGGAGCCAATGATGAG 405
Query 181 AAGAAAAACATACCAGTGGTTTTCACAGTTCCGCAGAGAGGTGGAGGGAA-ATTGGATCG 239
||||| |||| ||||||||||||||||||| | | |||||||||| |||| || ||||||
Sbjct 406 AAGAAGAACACACCAGTGGTTTTCACAGTT-C-C-GAGAGGTGGA-GGAAGATCGGATCG 461
Query 240 TGATATCTGGCGTTCATGGAATGCTGAATTCTTTCATGGTTGTTGTAACGCAAGCAGCAA 299
|||||||||||||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct 462 TGATATCTGGCGTTCATGGAATGCTGAATTCTTTTATGGTTGTTGTAATGCAAGCAGCAA 521
Query 300 GTTCCCAAATGCTAAAGCAATTACTAGAAATGATCGATACTTGGCGATTGCCACTAGTGG 359
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 522 GTTCCCAAATGCTAAAGCAATTACTAGAAATGATCGATACTTGGCGATTGCCACTAGTGG 581
Query 360 TGGTTTAAACCAACAACGGACTGGAATTGTAGATGCTGTTGTTGCTGCACGGATTCTAAA 419
||||||||||||||||||||||| |||||||||||||||||||||||| ||||||||||
Sbjct 582 CGGTTTAAACCAACAACGGACTGGTATTGTAGATGCTGTTGTTGCTGCAAGGATTCTAAA 641
Query 420 TGCTACGCTTGTTATTCCGAAGTTGGACCAGAAATCCTACTGGAAAGATGCCAGTGACTT 479
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 642 CGCTACGCTTGTTATTCCGAAGTTGGACCAGAAATCCTACTGGAAAGATGCCAGTGACTT 701
Query 480 CTCGAACATTTTCGATGTCGATTGGTTTATATCATTTCTCTCAAAAGATGTCAAAATCAT 539
|||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||
Sbjct 702 CTCGAACATTTTCGATGTTGATTGGTTTATGTCATTTCTCTCAAAAGATGTCAAAATCAT 761
Query 540 TGAGAAACTTCCACAGAAAGGAGGGCAAACATGGAGCCCTCGCAGAATGCGTGTACCGAG 599
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 762 TGAGAAACTTCCACAGAAAGGAGGGCAAACATGGAGCCCTCGCAGAATGCGTGTACCGAG 821
Query 600 AAAATGCAATGAGAAATGCTATATCAATCGGGTGTTACCTGTTCTTCAGAAAAGGCATGC 659
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 822 AAAATGCAATGAGAAATGCTATATCAATCGGGTGTTACCTGTTCTTCAGAAAAGGCATGC 881
Query 660 AGTTGAATTGAATAGATTTGATTACAGACTCTCAAACAAGTTGAGAGATGATCTGCAGAA 719
|||| ||||||||| ||||||||||||||||||||||||||||||||||||| |||||||
Sbjct 882 AGTTCAATTGAATAAATTTGATTACAGACTCTCAAACAAGTTGAGAGATGATTTGCAGAA 941
Query 720 GCTGAGGTGTAGAGTAAATTATCATGCGCTTAAGTTCACTGATCCAATTCTTGAAATGGG 779
|||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||
Sbjct 942 GCTGAGGTGTAGAGTAAACTATCATGCGCTTAAGTTTACTGATCCAATTCTTGAAATGGG 1001
Query 780 TAACGAATTGGTCCGAAGAATGCGGAAAAAGAGCAAGCACTTCATTGCTTTACATCTAAG 839
||||||||||||| ||||||||||||||| |||||| |||||||||||||||||||| ||
Sbjct 1002 TAACGAATTGGTCAGAAGAATGCGGAAAAGGAGCAAACACTTCATTGCTTTACATCTTAG 1061
Query 840 GTTTGAACCTGATATGCTCGCCTTCTCGGGATGTTACTATGGTGGTGGTGAGAAGGAGAA 899
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct 1062 GTTTGAACCTGATATGCTCGCCTTCTCTGGATGTTACTATGGTGGTGGTGAGAAGGAGAA 1121
Query 900 GAAAGAGTTAGGAACAATCAGAAGGAGATGGAAAACTTTACATGTAAATAACCCCGAAAA 959
||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct 1122 GAAAGAGTTAGGAACAATCAGAAGGAGATGGAAAACTTTGCATGTAAATAACCCTGAAAA 1181
Query 960 GCAAAGGCGACAAGGAAGATGTCCGCTAACACCAGAAGAAGTTGGATTAATGCTTAGAGC 1019
||||||| |||||||||||||||| || ||||||||||||||||||||||||||||||||
Sbjct 1182 GCAAAGGAGACAAGGAAGATGTCCACTTACACCAGAAGAAGTTGGATTAATGCTTAGAGC 1241
Query 1020 TTTGGGATATGGAAGTGATGTTCATATATATGTTGCATCAGGTGAAGTATATGGAGGAGA 1079
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct 1242 TTTGGGATATGGAAGTGATGTTCATATATATGTTGCATCAGGTGAAGTTTATGGAGGAGA 1301
Query 1080 AAAATCATTGGCTCCTTTGAAAGCACTTTTCCCACATTTCTATTCAAAAGACACCATAGC 1139
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct 1302 AAAATCATTGGCTCCTTTGAAAGCACTTTTTCCACATTTCTATTCAAAAGACACCATAGC 1361
Query 1140 TACAAAAATGGAGTTAAAAGCATTTTCTTCTTATTCTTCACGAATGGCTGCACTTGATTT 1199
||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct 1362 TACAAAAATGGAGTTAAAACCATTTTCTTCTTATTCTTCACGAATGGCTGCACTCGATTT 1421
Query 1200 CCTTGTGTGTGATGAAAGCGATGTTTTCGTTACCAACAATAACGGAAACATGGCGAGAAT 1259
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1422 CCTTGTGTGTGACGAAAGCGATGTTTTCGTTACCAACAATAACGGAAACATGGCGAGAAT 1481
Query 1260 ATTAGCCGGTCGAAGGAGATATTTTGGACATAAACCGACAATTAGGCCAAATGCGAAAAA 1319
|||||| |||||||||||||| |||||||||||||| |||||||| || |||||||||||
Sbjct 1482 ATTAGCAGGTCGAAGGAGATACTTTGGACATAAACCAACAATTAGACCGAATGCGAAAAA 1541
Query 1320 GCTATACAAGTTGTTTATGAGCAAAGAGAATACTACTTGGGAGGAGTTTGCTTCAAGAGT 1379
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1542 GCTATACAAGTTGTTTATGAGCAAAGAGAATACTACTTGGGAGGAGTTTGCTTCAAGAGT 1601
Query 1380 CAGAACATTTCAGAGAGGATTCATGGGAGAGCCAAAGGAAGTAAGAGCCGGAAGAGGTGA 1439
||||||||||||| ||||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct 1602 GAGAACATTTCAGAAAGGATTCATGGGAGAACCAAAGGAGGTAAGAGCCGGAAAAGGTGA 1661
Query 1440 GTTTCATGAGAATCCAGCGGCTTGTATATGCGAAGATACCGATGCTAAGGCAAAGGCAGG 1499
||||||||||||||||||||||||||||||||||||||| |||||||| | ||| || ||
Sbjct 1662 GTTTCATGAGAATCCAGCGGCTTGTATATGCGAAGATACTGATGCTAAAGTAAAAGCGGG 1721
Query 1500 AAAGATGGATTCGAGAAAACTT-GGGAAGaaaaa-caaaaaaGATGATGAACAGAATGAA 1557
||||||||||||||||||| || ||||||||| | || ||| || |||||| || || |
Sbjct 1722 AAAGATGGATTCGAGAAAA-TTCGGGAAGAAAGAGCAGAAA-GAAGATGAA--GA-TGCA 1776
Query 1558 GATGAAGATGCAGAGTCGTCAGAGACAGATTATGAGGAAGACCAAACTGATTTACAGGAC 1617
|| | | | | | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1777 GA-GTTG-T-C-G--TCGTCAGAGACAGATTATGAGGAAGACCAAACTGATTTACAGGAC 1830
Query 1618 AGAGGATTGTATAATGGTACGAGGTTAGATTATGATGATGCATTATCTGTTTCAGAAGAG 1677
||||| ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||
Sbjct 1831 AGAGGCTTGTATAATGGTACGAGGTTAGATTATGATGATGCGTTATCGGTTTCAGAAGAG 1890
Query 1678 CCTGAGCTAGAAGAAATGCTATCAGATTGA 1707
||||||||||||||||||||||||||||||
Sbjct 1891 CCTGAGCTAGAAGAAATGCTATCAGATTGA 1920
> AT1G76270.1 | Symbols: | O-fucosyltransferase family protein
| chr1:28613207-28616739 REVERSE LENGTH=2268
Length=2268
Score = 1328 bits (719), Expect = 0.0
Identities = 1282/1550 (83%), Gaps = 53/1550 (3%)
Strand=Plus/Plus
Query 6 TTTTCAGCGGCGGCGCTACAATTACTACAACCGTCTCCGTCTTCTCCTCCCTTTAATT-T 64
||| || |||||||||||| |||||||||||||||||||| |||||| ||| | || |
Sbjct 208 TTTCCATCGGCGGCGCTACCCTTACTACAACCGTCTCCGTCGTCTCCTTCCTCTCGTTAT 267
Query 65 GCGCCGTCTCTGGAGCTCTCCTTATCCTCTTCGCTCTTCTCTCCATT-CTTTCCCCTCCT 123
|||||||||| | ||||||| || ||||||||| |||||| | || ||| | || |||
Sbjct 268 -CGCCGTCTCTCTATCTCTCCTCATTCTCTTCGCTTTTCTCT-CTTTCCTTGCTCCGCCT 325
Query 124 CCT-GATGATTCCGATCGCCGCAT-CTCCAAGCAGATTCACTA-TGGAGCCAATGATGAG 180
||| || ||||||||||| | | | ||||| || | ||| ||| | | ||||||||| |
Sbjct 326 CCTGGA-GATTCCGATCG-C-CTTCCTCCACGC-G-TTCGCTACT-CATCCAATGATGCG 379
Query 181 AAGAAAAACATACCAGTGGTTTTCACAGTTCCGCAGAGAGGTGGAGGGAAATTGGATCGT 240
| ||| | || || ||||| || | || | | ||||| |||||| | || ||||||
Sbjct 380 -ATCAAAGC-TA-CA--GGTTTCCATA-TT-C-C-GAGAGCTGGAGGCAGATCAGATCGT 430
Query 241 GATATCTGGCGTTCATGGAATGCTGAATTCTTTCATGGTTGTTGTAACGCAAGCAGCAAG 300
||||||||||||||| | ||||||||||||||| ||| || | || |||||||||||
Sbjct 431 GATATCTGGCGTTCACGAAATGCTGAATTCTTTTTTGGATGCAGCAATGCAAGCAGCAAA 490
Query 301 TTCCCAAATGCTAAAGCAATTACTAGAAATGATCGATACTTGGCGATTGCCACTAGTGGT 360
||| ||||| | |||||| | || ||||||||||||||||||| || ||||||||||||
Sbjct 491 TTCGCAAATTCGAAAGCAGTGACGAGAAATGATCGATACTTGGTAATAGCCACTAGTGGT 550
Query 361 GGTTTAAACCAACAACGGACTGGAATTGTAGATGCTGTTGTTGCTGCACGGATTCTAAAT 420
||||| ||||||||||| ||||||||||||||||| |||||||| ||| |||||||||||
Sbjct 551 GGTTTGAACCAACAACGAACTGGAATTGTAGATGCAGTTGTTGCGGCAAGGATTCTAAAT 610
Query 421 GCTACGCTTGTTATTCCGAAGTTGGACCAGAAATCCTACTGGAAAGATGCCAGTGACTTC 480
||||| |||||| |||| ||||| |||||||| || |||||||| |||||||||||||||
Sbjct 611 GCTACTCTTGTTGTTCCCAAGTTAGACCAGAAGTCTTACTGGAAGGATGCCAGTGACTTC 670
Query 481 TCGAACATTTTCGATGTCGATTGGTTTATATCATTTCTCTCAAAAGATGTCAAAATCATT 540
||| | ||||||||||| ||||||||||| |||||||| || ||| |||| ||| ||
Sbjct 671 TCGCATATTTTCGATGTTGATTGGTTTATCTCATTTCTGTCTGGAGACGTCAGAATTATA 730
Query 541 GAGAAACTTCCACAGAAAGGAGGGCAAACATGGAGCCCTCGCAGAATGCGTGTACCGA-G 599
|| ||||||||| ||||||||||| |||||||| | | |||||||||||||| | |
Sbjct 731 AAGCAACTTCCACTGAAAGGAGGGCGTACATGGAGTACAAGTAGAATGCGTGTACC-ACG 789
Query 600 AAAATGCAATGAGAAATGCTATATCAATCGGGTGTTACCTGTTCTTCAGAAAAGGCATGC 659
||||| || |||| ||||||||| || || || ||||||||||||| |||||||||||
Sbjct 790 GAAATGTAACGAGAGATGCTATATTAACCGTGTTTTACCTGTTCTTCTCAAAAGGCATGC 849
Query 660 AGTTGAATTGAATAGATTTGATTACAGACTCTCAAACAAGTTGAGAGATGATC-TGCAGA 718
|||| || |||| | |||||| || ||||| |||||||||||||| ||||| | |||| |
Sbjct 850 AGTTCAACTGAACAAATTTGACTATAGACTTTCAAACAAGTTGAGTGATGA-CTTGCAAA 908
Query 719 AGCTGAGGTGTAGAGTAAATTATCATGCGCTTAAGTTCACTGATCCAATTCTTGA-AATG 777
|||| || |||||||||||||| ||||| || |||||||||||||| || ||| | ||||
Sbjct 909 AGCTAAGATGTAGAGTAAATTACCATGCTCTAAAGTTCACTGATCCTATACTT-ACAATG 967
Query 778 GGTAACGAATTGGTCCGAAGAATGCGGA-AAAAGAGCAAGCACTTCATTGCTTTACATCT 836
||||| ||||||||||| | ||| || | |||||| |||||||||||||||||| |
Sbjct 968 GGTAATGAATTGGTCCGGCGCATG-AGATTGAGGAGCAAACACTTCATTGCTTTACATTT 1026
Query 837 AAGGTTTGAACCTGATATGCTCGCCTTCTCGGGATGTTACTATGGTGGTGGTGAGAAGGA 896
||||| ||||||||||||||| || ||||||||||| || |||||||||||||| |||||
Sbjct 1027 AAGGTATGAACCTGATATGCTTGCATTCTCGGGATGCTATTATGGTGGTGGTGATAAGGA 1086
Query 897 GAA-GAAAG-AGTTAGGAACAATCAGAAGGAGATGGAAAACTTTACATGTAAATAACCCC 954
|| || || | || | | |||| ||||||||||||||||| |||||| | || |||||
Sbjct 1087 -AAGGAGAGAACTT-GCAGCAATTAGAAGGAGATGGAAAACATTACATATTAACAACCCA 1144
Query 955 GA-AAAGCAAAGGCGACAAGGAAGATGTCCGCTAACACCAGAAGAAGTTGGATTAATGCT 1013
|| ||| || |||||||||||||||||||| || || ||||||||||| ||| | |||||
Sbjct 1145 GAGAAA-CAGAGGCGACAAGGAAGATGTCCACTCACTCCAGAAGAAGTCGGACTGATGCT 1203
Query 1014 TAGAGCTTTGGGATATGGAAGTGATGTTCATATATATGTTGCATCAGGTGAAGTATATGG 1073
|||||||||||||||||| |||||||||||||||||||| || || ||||||||||||||
Sbjct 1204 TAGAGCTTTGGGATATGGCAGTGATGTTCATATATATGTCGCGTCTGGTGAAGTATATGG 1263
Query 1074 AGGAGAAAAATCATTGGCTCCTTTGAAAGCACT-TTTCCCACATTTCTATTCAAAAGACA 1132
||||||| ||||||||||||||||||||||||| ||| ||||| ||||||||||||||||
Sbjct 1264 AGGAGAAGAATCATTGGCTCCTTTGAAAGCACTCTTT-CCACACTTCTATTCAAAAGACA 1322
Query 1133 CCATAGCTACAAA--AATGGAGTTAAAAGCATTTTCTTCTTATTCTTC-ACGAATGGCTG 1189
| ||||||||||| || |||||| || | |||||||| || ||||| | |||||||||
Sbjct 1323 CTATAGCTACAAAGGAA--GAGTTAGAACCTTTTTCTTCGTACTCTTCTA-GAATGGCTG 1379
Query 1190 CACTTGATTTCCTTGTGTGTGATGAAAGCGATGT-TTTCGTTACCAACAATAACGGAAAC 1248
|||| || |||||||| |||||||||||||| || ||| || |||||||| || || ||
Sbjct 1380 CACTCGACTTCCTTGTTTGTGATGAAAGCGACGTATTT-GTAACCAACAACAATGGCAAT 1438
Query 1249 ATGGCGAGAATATTAGCCGGTCGAAGGAGATATTTTGGACATAAACCGACAATTAGGCCA 1308
||||| | |||||| || || | |||||||| || ||||||||||| || |||||||
Sbjct 1439 ATGGCAAAAATATTGGCTGGGAGGAGGAGATACTTAGGACATAAACCCACTGTTAGGCCG 1498
Query 1309 AATGCGAAAAAGCTATACAAG-TTGTTTATGAGCAAAGAGAATACTACTTGGGAGGAGTT 1367
||||| |||||||| ||| || || || |||| ||||||||| || || |||||||||||
Sbjct 1499 AATGCAAAAAAGCTTTAC-AGATTATTCATGAACAAAGAGAACACGACATGGGAGGAGTT 1557
Query 1368 TGCTTC-AAGAGTCAGAACATTTCAGAGAGGATTCATGGGAGAGCCAAAGGAAGTAAGAG 1426
| | || || |||| | | ||||||||||| ||||||||||||||||||||||||||||
Sbjct 1558 TTCATCTAA-AGTCCGTTCGTTTCAGAGAGGGTTCATGGGAGAGCCAAAGGAAGTAAGAG 1616
Query 1427 CCGGAAGAGGTGAGTTTCATGAGAATCCAGCGGCTTGTATATGCGAAGATACCGATGCTA 1486
| || |||||||| ||||| || || ||| | | || |||||||||||||| || ||||
Sbjct 1617 CTGGTAGAGGTGAATTTCACGAAAACCCATCCACGTGCATATGCGAAGATACAGAGGCTA 1676
Query 1487 AGGCAAAGGCAGGAAAGATGGATTCGAGAAAACTTGGGAAGaaaaacaaa 1536
|||||||||| | || | | || | ||||||||||| ||||||||||||
Sbjct 1677 AGGCAAAGGC-GCAATTA-GAAT-CTAGAAAACTTGGAAAGAAAAACAAA 1723
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 84387116145
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5