BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313103
Length=2052
Score E
Sequences producing significant alignments: (Bits) Value
AT1G22150.1 | Symbols: SULTR1;3 | sulfate transporter 1;3 | chr... 2023 0.0
AT1G78000.1 | Symbols: SULTR1;2, SEL1 | sulfate transporter 1;2... 1070 0.0
> AT1G22150.1 | Symbols: SULTR1;3 | sulfate transporter 1;3 | chr1:7818361-7821344
FORWARD LENGTH=1971
Length=1971
Score = 2023 bits (1095), Expect = 0.0
Identities = 1171/1209 (97%), Gaps = 0/1209 (0%)
Strand=Plus/Plus
Query 844 TGGAATTGGCAGACAATACTCATTAGTGCATCGTTCTTGATCTTCCTTCTCATCTCCAAG 903
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 763 TGGAATTGGCAGACAATACTCATTAGTGCATCGTTCTTGATCTTCCTTCTCATCTCCAAG 822
Query 904 TTCATAGGGAAGAAAAACAAGAAACTGTTTTGGATTCCAGCGATTGCTCCGTTAGTATCT 963
|| || ||||||| ||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 823 TTTATCGGGAAGAGAAACAAGAAACTGTTTTGGATTCCAGCTATTGCTCCGTTAGTATCT 882
Query 964 GTCATCATTTCAACCTTCTTCGTCTACATAACCCGAGCCGACAAGAAAGGAGTTCAGATA 1023
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 883 GTCATCATTTCAACCTTCTTCGTCTACATAACCCGAGCCGACAAGAAAGGAGTTCAGATA 942
Query 1024 GTGAAACATCTTGACAAAGGTCTAAACCCTTCTTCTTTGCGTCTAATATACTTCTCCGGC 1083
||||||||||||||||||||||| |||||||||||||||||||||||||| ||||| |||
Sbjct 943 GTGAAACATCTTGACAAAGGTCTGAACCCTTCTTCTTTGCGTCTAATATATTTCTCGGGC 1002
Query 1084 GATTACCTTCTCAAGGGCTTCCGCATAGGCGTTGTCTCAGGCATGGTTGCCTTGACGGAA 1143
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1003 GATTACCTTCTCAAGGGCTTCCGCATAGGCGTTGTCTCAGGCATGGTTGCCTTGACGGAA 1062
Query 1144 GCTGTAGCGATAGGAAGAACATTTGCAGCAATGAAAGACTACCAAATCGATGGTAACAAA 1203
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1063 GCTGTAGCGATAGGAAGAACATTTGCAGCAATGAAAGACTACCAAATCGATGGTAACAAA 1122
Query 1204 GAGATGGTAGCATTAGGAGCAATGAACGTGATCGGTTCGATGACCTCTTGCTATGTATCC 1263
||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||
Sbjct 1123 GAGATGGTAGCATTAGGAGCAATGAACGTAATCGGTTCAATGACCTCTTGCTATGTATCC 1182
Query 1264 ACCGGTTCGTTCTCAAGATCCGCTGTCAACTTCATGGCCGGATGTCAAACGGCAGTCTCC 1323
|||||||| |||||||||||||| |||||||| |||||||||||||||||||||||||||
Sbjct 1183 ACCGGTTCTTTCTCAAGATCCGCCGTCAACTTTATGGCCGGATGTCAAACGGCAGTCTCC 1242
Query 1324 AACATCATCATGTCCATCGTCGTCCTCTTAACGCTTCTCTTCCTCACTCCTCTTTTCAAA 1383
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct 1243 AACATCATCATGTCCATTGTCGTCCTCTTAACGCTTCTCTTCCTCACTCCTCTTTTCAAA 1302
Query 1384 TACACACCCAACGCAATTCTTGCAGCGATCATCATCAACGCCGTGATTCCTTTGGTTGAC 1443
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct 1303 TACACACCCAACGCAATTCTTGCAGCGATCATCATCAACGCTGTGATTCCTTTGGTTGAC 1362
Query 1444 GTTAATGCTACCATTTTGATTTTCAAGATCGATAAGCTCGATTTTGTTGCTTGTATGGGG 1503
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct 1363 GTTAATGCTACCATTTTGATCTTCAAGATCGATAAGCTCGATTTTGTTGCTTGTATGGGG 1422
Query 1504 GCTTTCTTTGGTGTCATCTTTGTATCCGTAGAGATTGGCCTTCTAATAGCCGTGGGGATA 1563
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1423 GCTTTTTTTGGTGTCATCTTTGTATCCGTAGAGATTGGCCTTCTAATAGCCGTGGGGATA 1482
Query 1564 TCTTTTGCCAAGATACTTTTGCAAGTTACGAGACCTAGGACAGCAATTCTTGGAAAGATA 1623
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct 1483 TCTTTTGCCAAGATACTTTTGCAAGTTACGAGACCTAGGACAGCGATTCTTGGAAAGATA 1542
Query 1624 CCAGGGACTTCGGTTTACAGGAATATCAATCAGTATCCTGAAGCGACTAGGATTCCCGGA 1683
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct 1543 CCAGGGACTTCGGTTTACAGGAATATCAATCAGTATCCTGAAGCGACTAGGATTCCGGGA 1602
Query 1684 GTTTTGACAATTCGTGTTGACTCCGCGATTTACTTCTCCAATTCCAATTATGTCAGGGAA 1743
||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||
Sbjct 1603 GTTTTGACAATTCGTGTTGACTCCGCGATTTACTTCTCCAACTCCAATTATGTTAGGGAA 1662
Query 1744 AGGATTCAAAGATGGTTGACAGATGAAGAAGAGATGGTGAAAGCTGCAAGCTTGCCGAGG 1803
||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |||
Sbjct 1663 AGGATTCAAAGATGGTTGACAGATGAAGAAGAGATGGTGGAAGCTGCAAGATTGCCTAGG 1722
Query 1804 ATCCAGTTTCTTATCATCGAAATGTCACCTGTTACGGACATCGATACTAGCGGGATTCAT 1863
|||||||||||||||||||||||||||||||||||||||||||||||||| || |||||
Sbjct 1723 ATCCAGTTTCTTATCATCGAAATGTCACCTGTTACGGACATCGATACTAGTGGTATTCAC 1782
Query 1864 GCCTTAGAAGACTTATATAAGTCTCTCTAAAAACGATACATTCAGTTGGTTCTAGCGAAT 1923
|||||||||||||| |||||||||||| |||||||| |||||||||||||||||||||||
Sbjct 1783 GCCTTAGAAGACTTGTATAAGTCTCTCCAAAAACGAGACATTCAGTTGGTTCTAGCGAAT 1842
Query 1924 CCAGGACCGCCGGTCATAGATAAGCTACACGTTTCTCACTTTGCAGACATGTTAGGACAG 1983
|||||||||||||||||| |||||||||| |||||||||||||| ||| || |||||||
Sbjct 1843 CCAGGACCGCCGGTCATAAATAAGCTACATGTTTCTCACTTTGCGGACTTGATAGGACAC 1902
Query 1984 GACAAAATCTTTCTGACGGTGGCTGAAGCCGTGGATTCTTGCTCTCCTAAACTCTCCGAC 2043
|||||||||||||||||||||||||| ||||||||||||||||| |||||||| ||||||
Sbjct 1903 GACAAAATCTTTCTGACGGTGGCTGAGGCCGTGGATTCTTGCTCCCCTAAACTGTCCGAC 1962
Query 2044 GAGGTCTGA 2052
|||||||||
Sbjct 1963 GAGGTCTGA 1971
Score = 1258 bits (681), Expect = 0.0
Identities = 735/762 (96%), Gaps = 0/762 (0%)
Strand=Plus/Plus
Query 1 ATGTCGGCTAGAGCTCATCCTGTGGACGATGACGGAGAGATTTCCCCGGTGGATACATCT 60
||||||||||||||||||||||||||||||||||||||||||||||||||||| | ||||
Sbjct 1 ATGTCGGCTAGAGCTCATCCTGTGGACGATGACGGAGAGATTTCCCCGGTGGAAAGATCT 60
Query 61 TCCCCGCGGCAAGCAAATACACCGTATGTCCACAAAGTCGAAGTTCCTCCGAAGCAAAAC 120
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 61 TCCCCGCGGCAAGCAAATACACCGTATGTCCACAAAGTCGAAGTTCCTCCTAAGCAAAAC 120
Query 121 CTCTTCAATGAGTTCATGTACACTTTCAAAGAAACTTTCTTCCACGATGATCCTCTAAGG 180
|| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 121 CTTTTCAATGAGTTCATGTACACTTTTAAAGAAACTTTCTTCCACGATGATCCTCTAAGG 180
Query 181 CATTTCAAGGACCAGTCAAAGTCCAAGAAGCTCATGCTCGGTATCCAGTCCGTCTTCCCG 240
|||||||||||||||||||| ||||| ||||||||||||||||||||||||||||| |||
Sbjct 181 CATTTCAAGGACCAGTCAAAATCCAAAAAGCTCATGCTCGGTATCCAGTCCGTCTTTCCG 240
Query 241 GTTATCGAGTGGGGAAGAAAATATAATCTTAAGATGTTTCGCGGCGATCTTATTGCCGGT 300
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct 241 GTTATCGAGTGGGGAAGAAAATATAATCTTAAGTTGTTTCGCGGCGATCTTATTGCCGGT 300
Query 301 TTAACCATAGCCAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAGCTCGCCAGTCTT 360
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 301 TTAACCATAGCCAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAGCTCGCGAGTCTT 360
Query 361 GACCCTAAGTATGGTCTATATTCAAGTTTTGTTCCTCCGTTGGTGTACGCATGTATGGGA 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 361 GACCCTAAGTATGGTCTATATTCAAGTTTTGTTCCTCCGTTGGTGTACGCATGTATGGGA 420
Query 421 AGCTCAAAGGATATAGCGATTGGACCCGTGGCAGTGGTTTCGCTCCTTTTAGGTACTCTG 480
||||||||||||||||||||||||||||| ||||||||||| ||||| ||||||||||||
Sbjct 421 AGCTCAAAGGATATAGCGATTGGACCCGTTGCAGTGGTTTCACTCCTATTAGGTACTCTG 480
Query 481 CTTCGGGCTGAGATCGACCCCAACACAAACCCTAACGAATATCTCCGCTTAGCCTTCACC 540
||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct 481 CTTCGTGCTGAGATCGACCCCAACACAAACCCTAATGAATATCTCCGCTTAGCCTTCACC 540
Query 541 TCCACGTTCTTTGCCGGTGTCACTCAAGCAGCACTAGGGTTCTTTAGATTGGGTTTCTTG 600
||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||||
Sbjct 541 TCCACGTTCTTTGCCGGTGTCACTCAAGCAGCACTCGGATTCTTCAGATTGGGTTTCTTG 600
Query 601 ATCGATTTCTTATCCCACGCCGCGGTAGTAGGGTTCATGGGTGGAGCAGCCATCACCATT 660
||||||||||| |||||||| ||||| ||||| |||||||| ||||||||||||||||||
Sbjct 601 ATCGATTTCTTGTCCCACGCGGCGGTGGTAGGTTTCATGGGCGGAGCAGCCATCACCATT 660
Query 661 GCGCTTCAACAGCTCAAAGGATTCCTCGGAATCAATAAGTTCACAAAGAAAACCGATATC 720
||||| |||||||||||||| ||||| |||||||||||||||||||||||||||||||||
Sbjct 661 GCGCTGCAACAGCTCAAAGGCTTCCTAGGAATCAATAAGTTCACAAAGAAAACCGATATC 720
Query 721 ATCGCGGTTCTTTCTTCCGTAATCAGCTCAGCCCACCACGGA 762
||||||||||||||||||||||||||||||||||| ||||||
Sbjct 721 ATCGCGGTTCTTTCTTCCGTAATCAGCTCAGCCCATCACGGA 762
> AT1G78000.1 | Symbols: SULTR1;2, SEL1 | sulfate transporter 1;2
| chr1:29329735-29333146 FORWARD LENGTH=2291
Length=2291
Score = 1070 bits (579), Expect = 0.0
Identities = 1013/1223 (83%), Gaps = 28/1223 (2%)
Strand=Plus/Plus
Query 844 TGGAATTGGCAGACAATACTCATTAGTGCATCGTTCTTGATCTTCCTTCTCATC-TCCAA 902
|||||||||||||| ||||||||| ||||||| ||||||| ||||||||||| | || ||
Sbjct 814 TGGAATTGGCAGACTATACTCATTGGTGCATCATTCTTGACCTTCCTTCTCA-CGTCTAA 872
Query 903 GTTCATAGGGAAGAAAAACAAGAAACTGTTTTGGATTCCAGCGATTGCTCCGTTAG-TAT 961
| |||| |||||||| | ||||||||| || ||| | ||||| ||||| || || | |||
Sbjct 873 GATCATTGGGAAGAAGAGCAAGAAACTATTCTGGGTACCAGCTATTGCGCCATT-GATAT 931
Query 962 CTGTCATCATTTCAACCTTCTTCGTCTACATAACCCGAGCCGACAAGA-AAGGAGTTCAG 1020
| || ||| |||| |||||||| ||||||||||||||||||||||| | ||||||| ||
Sbjct 932 CAGTTATCGTTTCCACCTTCTTTGTCTACATAACCCGAGCCGACAA-ACAAGGAGTCCAA 990
Query 1021 ATAGTGAAACATCTTGACAAAGGTCTAAACCCTTCTTCTTTGCGTCTAATATACTTCTCC 1080
|| |||||||| |||||| |||| | |||||||| || || | |||||| |||||| |
Sbjct 991 ATCGTGAAACACCTTGACCAAGGAATCAACCCTTCCTCGTTCCATCTAATCTACTTCACT 1050
Query 1081 GGCGATTACCTT-CTCAAGGGCTTCCGCATAGGCGTTGTCTCAGGCATGGTTGCCTTGAC 1139
|| ||| ||||| || |||||| ||||||| || || ||| | |||||||| || || ||
Sbjct 1051 GGTGATAACCTTGCT-AAGGGCATCCGCATCGGTGTAGTCGCTGGCATGGTCGCTTTAAC 1109
Query 1140 GGAAGCTGTAGCGATAGGAAGAACATTTGCAGCAATGAAAGACTACCAAATCGATGGTAA 1199
|||||||||||||| |||||||| ||||| ||||||||||||||||||||||| |||||
Sbjct 1110 AGAAGCTGTAGCGATTGGAAGAACCTTTGCTGCAATGAAAGACTACCAAATCGACGGTAA 1169
Query 1200 CAAAGAGATGGTAGCATTAGG-AGCAATGAACGTGA-TCGGTTCGATGACCTCTTGCTAT 1257
||||||||||||||||||||| | |||||||| | | || |||||| | ||||||||
Sbjct 1170 CAAAGAGATGGTAGCATTAGGTA-TGATGAACGT-AGTTGGATCGATGTCTTCTTGCTAC 1227
Query 1258 GTATCCACCGGTTCGTTCTCAAGATCCGCTGTCAACTTCATGGCCGGATGTCAAACGGCA 1317
||| | ||||| || ||||||||||| |||||||| |||||||| ||||||||||| ||
Sbjct 1228 GTAGCTACCGGATCTTTCTCAAGATCAGCTGTCAATTTCATGGCTGGATGTCAAACAGCG 1287
Query 1318 GTCTCCAACATCATCATGTCCATCGTCGTCCTCTTAACGCTT-CTCTTCCTCACTCCTCT 1376
|| || |||||||| ||||| || || || ||||| || || |||||||| ||||||||
Sbjct 1288 GTTTCAAACATCATAATGTCAATTGTTGTTCTCTTGAC-ATTGCTCTTCCTTACTCCTCT 1346
Query 1377 TTTCAAATACACACCCAACGCAATTCTTGCAGCGATCATCATCAACGCCGTGATTCCTTT 1436
||||| ||||| || ||||| || || ||||| |||||||||||||| |||||||||||
Sbjct 1347 CTTCAAGTACACTCCAAACGCCATCCTCGCAGCTATCATCATCAACGCTGTGATTCCTTT 1406
Query 1437 GGTTGACGT-TAATGCTACCATTTTGATTTTCAAGATCGATAAGCTCGATTTTGTTGCTT 1495
| | || | || ||| | |||||||| |||||| | |||||||||||||| | || |
Sbjct 1407 GATCGATATCCAA-GCTGCTATTTTGATCTTCAAGGTTGATAAGCTCGATTTCATCGCCT 1465
Query 1496 GTATGGGGGCTTTCTTTGGTGTCATCTTTGTATCCGTAGAGATTGGCCTTCTAATAGCCG 1555
|||| || || |||||||| ||||||||||| || || ||||| || ||||| || ||||
Sbjct 1466 GTATTGGAGCATTCTTTGGCGTCATCTTTGTTTCTGTTGAGATCGGACTTCTTATTGCCG 1525
Query 1556 TGGGGATATCTTTTGCCAAGATACTTTTGCAAGTTACGAGACCTAGGACAGCAATTCTTG 1615
| ||| || ||||| ||||| || |||||||| || |||||||| || ||| |||| |
Sbjct 1526 TCTCGATCTCGTTTGCTAAGATCCTCTTGCAAGTAACAAGACCTAGAACTGCAGTTCTCG 1585
Query 1616 GAAAGATACCAGGGACTTCGGTTTACAGGAATA-TCAATCAGTATCCTGAAGCGACTA-G 1673
|||| || ||| | |||||||||||||| |||| |||| |||||||||||||| |||| |
Sbjct 1586 GAAATATTCCAAGAACTTCGGTTTACAGAAATATTCAA-CAGTATCCTGAAGCCACTATG 1644
Query 1674 GATTCCCGGAGTT-TTGACAATTCGTGTTGACTCCGCGATTTACTTCTCCAATTCCAATT 1732
| |||| || ||| || || ||||||||||||||||| |||||||||||||| || ||||
Sbjct 1645 G-TTCCAGGGGTTCTT-ACTATTCGTGTTGACTCCGCCATTTACTTCTCCAACTCAAATT 1702
Query 1733 ATGTCAGGGAAAGGATTCAAAGATGGTTGACA-GATGAAGAAGAGATGGTGAAAGCTGCA 1791
|||| || |||||||| || |||||| | ||| || |||||||| | ||| ||||| |||
Sbjct 1703 ATGTTAGAGAAAGGATCCAGAGATGGCT-ACATGAGGAAGAAGAAAAGGTAAAAGCAGCA 1761
Query 1792 AGCTTGCCGAGGATCCAGTTTCTTATCATCGAAATGTCACCTGTTACGGACATCGATACT 1851
||| | || ||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct 1762 AGCCTACCTAGGATTCAGTTTCTCATCATCGAAATGTCACCTGTTACGGACATCGATACA 1821
Query 1852 AGCGGGATTCATGCCTTAGAAGACTTATATAAGTCTCTCTA-AAAACGATACATTCAGTT 1910
|| || ||||| || |||||||||||||| ||||||||| | |||| || ||||||||||
Sbjct 1822 AGTGGTATTCACGCATTAGAAGACTTATACAAGTCTCTCCAGAAAA-GAGACATTCAGTT 1880
Query 1911 GGTTCTAGCGAATCCAGGACCGCCGGTCATAGATAAGCTACACGTT-TCTCACTTTGCAG 1969
| |||| |||||||| |||||| ||| |||| ||||||||| || || |||||||| |
Sbjct 1881 GATTCTGGCGAATCCTGGACCGTTGGTGATAGGCAAGCTACAC-TTGTCGCACTTTGCCG 1939
Query 1970 ACATGTTAGGACAGGACAAAATCTTTCTGACGGTGGCTGAAGCCGTGGATTCTTGCTCTC 2029
||||||||||||| ||||| |||| ||| ||||||||||| ||||| || |||||| ||
Sbjct 1940 ACATGTTAGGACAAGACAATATCTATCTAACGGTGGCTGATGCCGTCGAGGCTTGCTGTC 1999
Query 2030 CTAAACTCTCCGACGAGGTCTGA 2052
| ||||||||| |||||||||||
Sbjct 2000 CAAAACTCTCCAACGAGGTCTGA 2022
Score = 494 bits (267), Expect = 2e-138
Identities = 515/633 (81%), Gaps = 24/633 (4%)
Strand=Plus/Plus
Query 112 AAGCAAAACCTCTTCAATGAGTTCATGTACACTTTCAAAGAAACTTTCTTCCACGATGAT 171
||||||||| | ||||| || ||||||||||| ||||||||||||||||| || ||||||
Sbjct 163 AAGCAAAACATGTTCAAGGATTTCATGTACACATTCAAAGAAACTTTCTTTCATGATGAT 222
Query 172 CCTCTAAGGCATTTCAAGGACCAGTCAAAGTCCAAGAAGCTCATGCTCGGTATCCAGTCC 231
||||| ||| |||| ||||| ||| | ||||| ||| || | ||||||||| |||| |||
Sbjct 223 CCTCTTAGGGATTTTAAGGATCAGCCTAAGTCTAAGCAGTTTATGCTCGGTCTCCAATCC 282
Query 232 GTCTTCCCGGT-TATCGAGTGGGGAAGAAAATATAATCTT-AAGATGTTTCGCGGCGATC 289
||||||||||| | |||| |||||| | || || | | || |||| ||| || || ||||
Sbjct 283 GTCTTCCCGGTCT-TCGATTGGGGACGTAACTACACT-TTCAAGAAGTTCCGAGGTGATC 340
Query 290 TTAT-TGCCGGTTTAACCATAGCCAGTCTCTGCATTCCTCAGGATATTGGATATGCAAAG 348
| || | ||||||||||||| || ||||||||||||||||||||||||||||| || |||
Sbjct 341 TCATCT-CCGGTTTAACCATTGCAAGTCTCTGCATTCCTCAGGATATTGGATACGCTAAG 399
Query 349 CTCGCCAGTCTTGA-CCCTAAGTATGGTCTATATTCAAGTTTTGTTCCTCCGTTGGTGTA 407
| || | |||||| ||| || || ||| ||||||| |||||||||||||| ||||||||
Sbjct 400 TTGGCGAATCTTGATCCCAAA-TACGGTTTATATTCGAGTTTTGTTCCTCCATTGGTGTA 458
Query 408 CGCATGTATGGGAAGCTCAAAGGATATAGCGATTGGACCCGTGGCAGTGGTTTCGCTCCT 467
|| ||||||||||| || | ||||||||| || ||||| || || ||||||||||| |
Sbjct 459 TGCTTGTATGGGAAGTTCTAGGGATATAGCAATAGGACCTGTCGCTGTGGTTTCGCTG-T 517
Query 468 TT-TAGGTAC-TCTGCTTCGGGCTGAGATCGACCCCAACACAAACCCTA-ACGAATATCT 524
| |||| || | ||||||| |||||||| || || ||||||| || | | ||||||||
Sbjct 518 TGCTAGGCACAT-TGCTTCGAGCTGAGATTGATCCAAACACAAGTCC-AGATGAATATCT 575
Query 525 CCGC-TTAGCCTTCACCTCC-ACGTTCTTT-GCCGGTGTCACTC-AAGCAGCACTAGGGT 580
|||| || |||||||| | | ||||| ||| |||||| | || | ||||||| || || |
Sbjct 576 CCGCCTT-GCCTTCAC-TGCTACGTT-TTTCGCCGGTATAAC-CGAAGCAGCCCTTGGAT 631
Query 581 TCTTTAGATTGGGTTTCTTGATCGATTTC-TTATCCCACGCCGCGGTAGTAGGGTTCATG 639
|||| ||||| || ||||||||||||||| || |||||||| || || || || ||||||
Sbjct 632 TCTTCAGATTAGGATTCTTGATCGATTTCCTT-TCCCACGCGGCTGTGGTTGGCTTCATG 690
Query 640 GGTGGAGCAGCCATCACCATTGCGCTTCAACAGCTCAAAGGATTCCTCGGAATCAATAAG 699
|| || ||||||||||| || || ||||| ||||| ||||| |||||||| ||||| ||
Sbjct 691 GGCGGCGCAGCCATCACTATCGCTCTTCAGCAGCTTAAAGGCTTCCTCGGGATCAAGAAA 750
Query 700 TTCACAAAGAAAACCGATATCATCGCGGTTCTT 732
||||| |||||||| ||||| || | ||||||
Sbjct 751 TTCACCAAGAAAACTGATATTATTTCTGTTCTT 783
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 101706304170
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5