BLASTN 2.2.26+
Reference:
Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000),
"A greedy algorithm for aligning DNA sequences", J Comput Biol 2000;
7(1-2):203-14.
Database: TAIR10_cdna_20110103_representative_gene_model_updated
33,602 sequences; 51,074,197 total letters
Query= Ahg313192
Length=3810
Score E
Sequences producing significant alignments: (Bits) Value
AT1G23180.1 | Symbols: | ARM repeat superfamily protein | chr1... 2274 0.0
AT1G23170.2 | Symbols: | Protein of unknown function DUF2359, ... 1005 0.0
AT1G70770.1 | Symbols: | Protein of unknown function DUF2359, ... 625 1e-177
AT3G11880.1 | Symbols: | Protein of unknown function DUF2359, ... 158 5e-37
> AT1G23180.1 | Symbols: | ARM repeat superfamily protein | chr1:8215721-8219584
FORWARD LENGTH=2978
Length=2978
Score = 2274 bits (1231), Expect = 0.0
Identities = 1353/1411 (96%), Gaps = 11/1411 (1%)
Strand=Plus/Plus
Query 1540 TTTCTTACTGTCGAAGCTAGAAAACAACCTAGCAGAAGAAGAAGACGCGAGCTCTCCTTC 1599
||||| ||||| ||||||||||||||| || ||||||| ||||||||||| |||||||
Sbjct 492 TTTCTCACTGTTGAAGCTAGAAAACAATCT---AGAAGAATAAGACGCGAGCGCTCCTTC 548
Query 1600 AGCCAC-TTTCCAGTACTTATCCACTCGAACCATCGTCTTCGTCATGGTTTCTCCGAGCT 1658
|||| | |||||||||||||| || ||||||| ||||||||||||||||||||| |||||
Sbjct 549 AGCC-CTTTTCCAGTACTTATTCAATCGAACCGTCGTCTTCGTCATGGTTTCTCAGAGCT 607
Query 1659 CAATTCGAGTTTTGATCGTTCCAACAGTGGAGAAACTGGTTCCGATACCACGT-TTGAAG 1717
||||||||||||||||||||||||||||||||||||||||||||||||||| | || |||
Sbjct 608 CAATTCGAGTTTTGATCGTTCCAACAGTGGAGAAACTGGTTCCGATACCAC-TCTTAAAG 666
Query 1718 ATGGTGAAGAAGTGAGGGGTGAAAGCTCTTCAGGTGTTGGTGATAGCTATGTGGCCTTGT 1777
||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||
Sbjct 667 ATGGTGAAGAAGTGAGGAGTGAAAGCTCTTCAGGTGTTGGTGATAGCTATGTGGGCTTGT 726
Query 1778 TTGTGGGAATGCTTGGTTTGGACAACGATCCTCTTGATAGAGAGCAGGCAATAGAGGCGC 1837
||||||||||||| ||||||||||||||||||||||||||||||||||| |||||| |||
Sbjct 727 TTGTGGGAATGCTCGGTTTGGACAACGATCCTCTTGATAGAGAGCAGGCGATAGAGACGC 786
Query 1838 TATGGAAGTACTCTTTGGGTGGGAAGAAATGTGTTGATGCGATAATGCAGTTTCATGGTT 1897
|||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||
Sbjct 787 TATGGAAGTACTCTTTGGGTGGAAAGAAATGTATTGATGCGATAATGCAGTTTCATGGTT 846
Query 1898 GTTTGAGTCTCGTTGTCAATCTTCTTAAGTCCGAGTCCAGCTCCGCTTGTGAAGCTGCTG 1957
|||||| ||| ||||||||||||| ||||| |||||||||||||| |||||||||||||
Sbjct 847 GTTTGAATCTAATTGTCAATCTTCTCAAGTCTGAGTCCAGCTCCGCCTGTGAAGCTGCTG 906
Query 1958 CTGGG-TTGATACGGTCTATAGCTGCTGTGAATCTATACAGAGAATCCGTTGCTGAGAGT 2016
||||| || ||||||||||||||| |||||||||| ||||||||||||||||||||||||
Sbjct 907 CTGGGCTT-ATACGGTCTATAGCTTCTGTGAATCTGTACAGAGAATCCGTTGCTGAGAGT 965
Query 2017 GGAGCGTTGGAAGAGATAACCGCTCTACTGAGCCGGCCTGCGTTAGCTACAGTGGTGAAA 2076
||||||||||||||||||||||||||||||||||| ||| || |||||||||||||||||
Sbjct 966 GGAGCGTTGGAAGAGATAACCGCTCTACTGAGCCGACCTTCGCTAGCTACAGTGGTGAAA 1025
Query 2077 GAACAATGCATATGTGCTCTGTGGAATCTGACTGTGGATGAAGAAATTAGGGAAAAGGTT 2136
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct 1026 GAACAATGCATATGTGCTCTGTGGAATCTGACTGTGGATGAAGAAATTAGGGAGAAGGTT 1085
Query 2137 GCTGACTTTGATATCCTGCGGCTTCTCATTAGTTTCCTTGAAGATGATGATGTAAACGTA 2196
||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||
Sbjct 1086 GCTGACTTTGATATCCTTAGGCTACTCATTAGTTTCCTTGAAGATGATGATGTAAACGTA 1145
Query 2197 AAGGAAGCAGCTGGTGGCGTCTTGGCCAATCTAGCCCTTAGCCGCTCGAAC-CACAAGAT 2255
|||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||
Sbjct 1146 AAGGAAGCAGCTGGTGGCGTCTTGGCCAATCTAGCCCTTAGCCGCTCG-ACTCACAAGAT 1204
Query 2256 TCTGGTTGAAGTAGGAGTCATACCCAAACTGGCAAAATTGTTGAAAGGCGATAATACAGA 2315
|||||||||||||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct 1205 TCTGGTTGAAGTAGGAGTCATACCAAAACTGGCAAAATTGTTGAAAGCCGATAATACAGA 1264
Query 2316 AAACAAAGGGTCTAAAGTTATTAGAAAAGAAGCAAGAAATGTGCTTTTGGAGCTCGCCAA 2375
|||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct 1265 AAACAAAGGGTCTAAAGTTATTAGAAAAGAAGCAAGAAATGTGCTTTTGGAGCTAGCCAA 1324
Query 2376 AGACGAATACTACAGAATTCTTGTCATTGAGGAGGGTGTTGTACCCATTCCCATAATTGG 2435
||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||
Sbjct 1325 AGACGAATACTACAGAATTCTCGTCATTGAGGAGGGAGTTGTACCCATTCCCATAATTGG 1384
Query 2436 TGCAGACGCTTACAAGTCCTTCAGACCGGATCTGTATTCTTGGCCTAGTTTACCAGATGG 2495
|||||||||||| |||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct 1385 TGCAGACGCTTATAAGTCCTTCAGACCGGATTTGTATTCTTGGCCTAGTTTACCAGATGG 1444
Query 2496 TATAAATATTGAGCAGACAGCAAAAGCTCCTTCAAGATTTGGTGCCTCTGAGCTGCTCCT 2555
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1445 TATAAATATTGAGCAGACAGCAAAAGCTCCTTCAAGATTTGGTGCCTCTGAGCTGCTCCT 1504
Query 2556 TGGTTTAAATGTTGACAAGAATGTTGACGACGTAGATGAAGCGAAAATGAAAGCAATAGT 2615
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1505 TGGTTTAAATGTTGACAAGAATGTTGACGACGTAGATGAAGCCAAAATGAAAGCAATAGT 1564
Query 2616 TGGGAGGACAAATCAGCAGTTCCTTGCCCGTATTGGAGCAATTGAATTTGAGAAGGAAAT 2675
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1565 TGGGAGGACAAATCAGCAGTTCCTTGCCCGTATTGGAGCAATTGAATTTGAGAAGGAAAT 1624
Query 2676 TAAATCCGAAGGGCCAGCGAAATCTCAGCAGCTTACTCTTCTTCCTTGTGTAGATGGTGT 2735
||| ||||||||||||| |||||||||||||||||| |||||||||||||||||||||||
Sbjct 1625 TAAGTCCGAAGGGCCAGGGAAATCTCAGCAGCTTACCCTTCTTCCTTGTGTAGATGGTGT 1684
Query 2736 GGCTCGATTAGTCTTGATTCTTGGATTGGCAGACGAATTGGCAGTTACAAGAGCTGCAGA 2795
||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||
Sbjct 1685 GGCTCGATTAGTCTTGATTCTTGGATTGGCAGATGAATTGGCAGCTACAAGAGCTGCAGA 1744
Query 2796 GTCAATTGCTGATGCATCTATCAACGAGGATATGCGGGTTTCGTTCATGGAAGCCGGAGC 2855
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 1745 GTCAATTGCTGATGCATCTATCAACGAGGATATGCGGGTTTCTTTCATGGAAGCCGGAGC 1804
Query 2856 TGTAAAGCCTTTGGTTCAGCTTTTAGCCAACAACAACAAAGAGGCTGTTAAATTACCCGT 2915
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct 1805 TGTAAAGCCTTTGGTTCAGCTTTTAGCCAACAACAACAAAGAGACTGTTAAATTACCCGT 1864
Query 2916 CATCCGTGCCTTGAAAAATTTATCACTTAGC 2946
|||||||||||||||||||||||||||||||
Sbjct 1865 CATCCGTGCCTTGAAAAATTTATCACTTAGC 1895
Score = 1243 bits (673), Expect = 0.0
Identities = 776/827 (94%), Gaps = 2/827 (0%)
Strand=Plus/Plus
Query 2985 CAGAAAGGAAGTTCTGGACGCTGCTGTTTTTTCTCGGCTCGTTCAGATTGCGAAAACAGC 3044
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct 2084 CAGAAAGGAAGTTCTGGACGCTGCTGTTTTTTCTCGGCTCGTCCAGATTGCGAAAACAGC 2143
Query 3045 CTCTCCAAACTTGCTAAGAAATGCAATCTCTGTCATCGAGTTTGGTATTGTCAGTAATCC 3104
|||||| ||| |||||||||| |||||||||||||||||||||||||| ||||||||||
Sbjct 2144 CTCTCCGAACCTGCTAAGAAACGCAATCTCTGTCATCGAGTTTGGTATAATCAGTAATCC 2203
Query 3105 AAACATGGACACGATCATCTCTGGGGATATCACAACTGTTCTTGATCTTGCTCTCCGGCA 3164
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2204 AAACATGGACACGATCATCTCCAAGGATATCACAACTGTTCTTGATCTTGCTCTCCGGCA 2263
Query 3165 GAAAGTCCTGGAAGAACCTGAGAACGAAGCTGAGGAGTTAGAGAAACATCTTCTTGAGCT 3224
|||||||||||||||||||||||| |||||||||||||||||||||||||| ||| ||||
Sbjct 2264 GAAAGTCCTGGAAGAACCTGAGAATGAAGCTGAGGAGTTAGAGAAACATCTGCTTAAGCT 2323
Query 3225 AGAAGAAGCTGGTTTGACGATTTCCGCTGCTTCAAGGCTACTGACAAAACTTGTCGACTC 3284
|||||||||||||||||||||||||||||||||||||||||||||||||||| | |||||
Sbjct 2324 AGAAGAAGCTGGTTTGACGATTTCCGCTGCTTCAAGGCTACTGACAAAACTTCTTGACTC 2383
Query 3285 TGAGTCCTTTCGCCAAACAATAGATGTCACAGTCTTCACAGAATTACTAAGGAAGATCCT 3344
|||||||||||||||||||||||| | | ||||||| ||||||| |||||||||||||
Sbjct 2384 CGAGTCCTTTCGCCAAACAATAGATACCGCGGTCTTCATAGAATTAGTAAGGAAGATCCT 2443
Query 3345 AAAATCTAGCCTCCCTCTACACTACAAAGACTGGGTTGCTGCTTGTCTTGTCAAACTCAC 3404
|| ||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct 2444 AAGATCAAGCCTCCCTCTACACTACAAAGACTGGGTTGCCGCTTGTCTTGTCAAACTCAC 2503
Query 3405 CGCTCTCTCCTCTCCCCCTCAACCCCTCAACAATCCAATCAA-CATCGAGGTAACTCTGT 3463
|||||||||||||||| ||||| ||||||||||||| ||||| | | |||||||||||||
Sbjct 2504 CGCTCTCTCCTCTCCCTCTCAATCCCTCAACAATCCGATCAATCTT-GAGGTAACTCTGT 2562
Query 3464 ACAAAACGATCCCGAGCCTTGTAGAACAAATGAGCTTTTCCTCATCACCAGAAGCGAAAG 3523
||||||||||||||||||| || |||||||||||||||||||||||||||||| ||||||
Sbjct 2563 ACAAAACGATCCCGAGCCTCGTGGAACAAATGAGCTTTTCCTCATCACCAGAAACGAAAG 2622
Query 3524 AAGCAGCGGTTTTGGAACTGAACAGGATAATCTCCGAGGGAGTTCCAGAGTCGACCCAAA 3583
||||||||||||| |||||||||| |||| ||||||||||||||||||| || | |||||
Sbjct 2623 AAGCAGCGGTTTTAGAACTGAACAAGATAGTCTCCGAGGGAGTTCCAGAATCTATCCAAA 2682
Query 3584 CTCTTGCTTCACACGGAGGTATCGAGCCGCTGGTGAAGCTTCTAGAAGAAAGGAACGAGC 3643
| ||||||||||| ||||||||||| |||||||| |||||||| ||||||||||||||||
Sbjct 2683 CACTTGCTTCACAAGGAGGTATCGAACCGCTGGTTAAGCTTCTTGAAGAAAGGAACGAGC 2742
Query 3644 GGTGCGTTGAAGCGAGTTTGTCAGTATTGTATAACCTAAGCATGGACAGTGAGAACCACA 3703
||||||||||||||||||||||||||||||| ||| ||| ||||||||||||||||||||
Sbjct 2743 GGTGCGTTGAAGCGAGTTTGTCAGTATTGTACAACTTAACCATGGACAGTGAGAACCACA 2802
Query 3704 CAGCCATCATAAGAGCAGGAGCAGTACCAGTATTGAGACGTATCGTTATGTCTCAAAGAC 3763
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |||
Sbjct 2803 CAGCCATCATAAGAGCAGGAGCTGTACCAGTATTGAGACGTATCGTTATGTCTCAACGAC 2862
Query 3764 CTCAATGGGAAAAAGCTCTTCGGTTACTCAGAAATTTACCCGTTTAA 3810
| |||||||| ||||||||||||||||||||||||||||||||||||
Sbjct 2863 CACAATGGGAGAAAGCTCTTCGGTTACTCAGAAATTTACCCGTTTAA 2909
> AT1G23170.2 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr1:8212556-8215807 FORWARD LENGTH=2307
Length=2307
Score = 1005 bits (544), Expect = 0.0
Identities = 568/580 (98%), Gaps = 0/580 (0%)
Strand=Plus/Plus
Query 505 ATTCCACTTTGTCATATTCCTGAAGCTGTGTATAAGACATCAGCTGATTGGATTAACCAA 564
|||||||||| ||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 814 ATTCCACTTTCTCATATTCCTGAAGCAGTGTATAAGACATCAGCTGATTGGATTAACCAA 873
Query 565 CGTCCCATTGAGGCACTTGGAGCCTTTGTATTGTGGGGGTTGGATTGTATTCTTGCTGAC 624
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct 874 CGTCCCATTGAGGCACTTGGAGCCTTTGTATTGTGGGGCTTGGATTGTATTCTTGCTGAC 933
Query 625 TTGGCTGTACAACAAGGAGGCGCCAAGGGTGGTAAGAAGGGAGCACAACAGGCTTCTTCA 684
|||||||||||||||||||| | ||||||||||||||| ||||||||||||||||||||
Sbjct 934 TTGGCTGTACAACAAGGAGGTGTCAAGGGTGGTAAGAAAGGAGCACAACAGGCTTCTTCG 993
Query 685 AAATCTCAGGTTGCGATATTTGTGGCGGTAGCAATGGTTTTGCGTAAGAAACCTGATGCT 744
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 994 AAATCTCAGGTTGCGATATTTGTGGCGGTAGCAATGGTTTTGCGTAAGAAACCTGATGCT 1053
Query 745 TTAACTAATATATTGCCAACTTTGAGGGAGAATCCCAAGTATCAGGGACAAGATAAGCTT 804
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct 1054 TTAACTAATATATTGCCAACTTTGAGGGAGAATCCCAAGTATCAGGGACAGGATAAGCTT 1113
Query 805 CCAGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATATATCAGTAGGCTTGTAC 864
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1114 CCAGTTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATATATCAGTAGGCTTGTAC 1173
Query 865 TCGTGGGCGCACAACTTGTTACCGGTGGTCAGTAGCAAGAGTTGCAATCCTCAGTCAAGG 924
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1174 TCGTGGGCTCACAACTTGTTACCGGTGGTCAGTAGCAAGAGTTGCAATCCTCAGTCAAGG 1233
Query 925 GATCTCATCCTTCAGTTGGTTGAGAGAATCTTGTCCAACCCGAAGGCCCGGACCATACTT 984
|||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct 1234 GATCTCATTCTTCAGTTGGTTGAGAGGATCTTGTCCAACCCGAAGGCCCGGACCATACTT 1293
Query 985 GTAAATGGGGCTGTTAGGAAGGGAGAGCGATTGATTCCACCTCCTTCGTTTGAGATCTTG 1044
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1294 GTAAATGGGGCTGTTAGGAAGGGAGAGCGATTGATTCCACCTCCTTCGTTTGAGATCTTG 1353
Query 1045 GTTCGACTTACATTCCCTGCATCATCCGCAAGAGTGAAGG 1084
||||||||||||||||||||||| ||||||||||||||||
Sbjct 1354 GTTCGACTTACATTCCCTGCATCTTCCGCAAGAGTGAAGG 1393
Score = 706 bits (382), Expect = 0.0
Identities = 467/508 (92%), Gaps = 5/508 (1%)
Strand=Plus/Plus
Query 1 ATGGATCCAATCGAATCCGTGGAGTACAATGGCTTTGAAACCACCAATGGTGACTCTCAC 60
||||||||||| ||||| ||||||||||||||||||||||| ||||||||| ||||||||
Sbjct 169 ATGGATCCAATTGAATCAGTGGAGTACAATGGCTTTGAAACTACCAATGGTAACTCTCAC 228
Query 61 AACAACGACCATGGTTGGAAGAAAGTAGTGTACCCAAAACGTAACCGGAAGCAAAAACCG 120
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 229 AACGACGACCATGGTTGGAAGAAAGTAGTGTACCCAAAACGTAACCGGAAGCAAAAACCG 288
Query 121 GCGGATCAAGCGGCGGTGGCGAA---TGTTGTCTCCGGAAAACTAATTCCCAATGGAACT 177
|||||||||||||||| | |||| || |||| |||| || |||||||||||||| |||
Sbjct 289 GCGGATCAAGCGGCGGCGACGAAGAATGGTGTCACCGGGAATCTAATTCCCAATGGTACT 348
Query 178 TTATCCAATGGAGGAGACAACATCTTCCGTTCTCTTGAGGAGCAAGCTGAAGATCGTCAT 237
|||||||||||||||| |||| |||||||||||||||||||||||||||||| |||||||
Sbjct 349 TTATCCAATGGAGGAGGCAACGTCTTCCGTTCTCTTGAGGAGCAAGCTGAAGGTCGTCAT 408
Query 238 CGACGGATCCTCGCGGCGAAGAAGGCTTCTGATGTTGCAGATGCGTCGGATGGAGTGA-G 296
| || ||||||||| |||||||| ||||| ||| || |||| |||||| || | || |
Sbjct 409 CTACAGATCCTCGCCGCGAAGAAAGCTTCCGATACGGCGGATGTGTCGGACGGGG-GAAG 467
Query 297 ATCTAAACGGCGATCTAACGGATACGGCGACGAAGGGTATGATTTTGATGACAGCGACAG 356
||||||| ||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct 468 ATCTAAATGGCGATCTAACGGGTACGGCGACGAAGGGTATGATTTTGATGACAGCGACAG 527
Query 357 TGAAATCGCGGTGGGGAAAGAGAATTTGAAGGTGGAGGAAGTTAAGAAACCGAAGGTTAA 416
|||||||||||||||||| ||||||||||| | |||||||||||||||||||||||||||
Sbjct 528 TGAAATCGCGGTGGGGAAGGAGAATTTGAAAGCGGAGGAAGTTAAGAAACCGAAGGTTAA 587
Query 417 GAAGGAGAAGAAGCCTAAGGTTACTTTAGCTGAAGCTGCTGCTAAAATTGATGTACCTAA 476
||||| ||||||||||||||||||||||||||||||||||||||| ||||||||| ||||
Sbjct 588 GAAGGTGAAGAAGCCTAAGGTTACTTTAGCTGAAGCTGCTGCTAAGATTGATGTATCTAA 647
Query 477 TCTCGCAGCTTTTCTCGTTGAAGCTTCG 504
|||||||||||| |||||||||||||||
Sbjct 648 TCTCGCAGCTTTCCTCGTTGAAGCTTCG 675
Score = 588 bits (318), Expect = 1e-166
Identities = 346/360 (96%), Gaps = 0/360 (0%)
Strand=Plus/Plus
Query 1083 GGAGAATCTTTATACCGACAATTTGGGAGCCAGTGTTGCTGTTCTTAAAAAGCTTATTGA 1142
||||||||||||||||||||||||| ||||||||||||||||||||||||||| ||||
Sbjct 1602 GGAGAATCTTTATACCGACAATTTGAAAGCCAGTGTTGCTGTTCTTAAAAAGCTCATTGG 1661
Query 1143 CGAGTGGAAGGAGCGTTCTGTCAAGTTGACTCCTGCTGAAACCCTCACTCTCAACCAAAC 1202
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct 1662 CGAGTGGAAGGAGCGTTCTGTCAAGCTGACTCCTGCTGAAACCCTCACTCTCAACCAAAC 1721
Query 1203 AATGAAGAGCTTGAGGCAAAAGAATGAGGAAGCTCTTGCTGAGGGAGGTAATGGTTTAAG 1262
|||||||||||||||||||||||| |||||||||||| ||||||||||||||||| ||||
Sbjct 1722 AATGAAGAGCTTGAGGCAAAAGAACGAGGAAGCTCTTACTGAGGGAGGTAATGGTGTAAG 1781
Query 1263 CCAGTCCCTTTACAAAGACGCAGACAAGTACTGCAAGGTGATCGCTGGGAAACTCTCCAG 1322
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1782 CCAGTCCCTATACAAAGACGCAGACAAGTACTGCAAGGTGATCGCTGGGAAACTCTCCAG 1841
Query 1323 TGGTGGCTGCATCAAAAGTATAGCTACGActgctgcacttctggctgctactggttttgc 1382
||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||
Sbjct 1842 TGGTGGCTGCATCAAAAGTATAGCTACCACTGCTGCACTTCTAGCTGCTACTGGTTTTGC 1901
Query 1383 tggtgctgctgctgtgtctgcCAACCCCGAGGCTATAGCCTACCTAAAGAACCTGGTGGA 1442
||||||||||||| ||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct 1902 TGGTGCTGCTGCTCTGTCTGCCAACCCTGAGGCTATAGCTTACCTAAAGAACCTGGTGGA 1961
> AT1G70770.1 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr1:26688230-26691277 REVERSE LENGTH=2317
Length=2317
Score = 625 bits (338), Expect = 1e-177
Identities = 493/570 (86%), Gaps = 2/570 (0%)
Strand=Plus/Plus
Query 516 TCATATTCCTGAAGCTGTGTATAAGACATCAGCTGATTGGATTAACCAACGTCCCATTGA 575
||||||||| ||| | |||||||||||||||| ||||||||| ||||| ||||| |||||
Sbjct 719 TCATATTCCGGAACCAGTGTATAAGACATCAGTTGATTGGATCAACCATCGTCCAATTGA 778
Query 576 GGCACTTGGAGCCTTTGTATTGTGGGGGTTGGATTGTATTCTTGCTGACTTGGCTGTACA 635
|||||||||||||||||| ||||||| || ||||||||||| | || || || | |||
Sbjct 779 GGCACTTGGAGCCTTTGTGTTGTGGGCTTTTGATTGTATTCTCACAGATTTAGCAGCACA 838
Query 636 ACAAGGAGGCGCCAAGGGTGGTAAGAAGGGAGCACAACAGGCTTCTTCAAAATCTCAGGT 695
|||||| || || || ||||| |||||||| | ||||| || |||| |||||||||||
Sbjct 839 ACAAGGTGGTGCTAAAGGTGGGAAGAAGGGTGGTCAACAAACTACTTCCAAATCTCAGGT 898
Query 696 TGCGATATTTGTGGCGGTAGCAATGGTTTTGCGTAAGAAACCTGATGCTTTAACTAATAT 755
|| |||||||| || |||| ||||| ||||||| ||| ||||||||||| |||||| |
Sbjct 899 GGCAATATTTGTTGCATTAGCGATGGTATTGCGTAGGAAGCCTGATGCTTTGACTAATGT 958
Query 756 ATTGCCAACTTTGAGGGAGAATCCCAAGTATCAGGGACAAGATAAGCTTCCAGTTACAGT 815
|||||||||| ||||||||||||| ||||||||||| || ||||||||||| ||||||||
Sbjct 959 ATTGCCAACTCTGAGGGAGAATCCTAAGTATCAGGGTCAGGATAAGCTTCCGGTTACAGT 1018
Query 816 TTGGATGATGGCTCAGGCCTCCCAAGGTGATATATCAGTAGGCTTGTACTCGTGGGCGCA 875
|||||||||||||||||||||||||||||||||| | ||||||||||| || ||||| ||
Sbjct 1019 TTGGATGATGGCTCAGGCCTCCCAAGGTGATATAGCTGTAGGCTTGTATTCATGGGCTCA 1078
Query 876 CAACTTGTTACCGGTGGTCAGTAGCAAGAGTTGCAATCCTCAGTCAAGGGATCTCATCCT 935
|||||||||||| || ||| ||| |||| || || |||||||||||||||||||||||
Sbjct 1079 CAACTTGTTACCTGTTGTCGGTAATAAGAACTGTAACCCTCAGTCAAGGGATCTCATCCT 1138
Query 936 TCAGTTGGTTGAGAGAATCTTGTCCAACCCGAAGGCCCGGACCATACTTGTAAATGGGGC 995
||||||||||||| ||| ||| | || || ||||| || ||||||||||||||||| ||
Sbjct 1139 GCAGTTGGTTGAGAAAATTTTGACGAATCCAAAGGCTCGTACCATACTTGTAAATGGAGC 1198
Query 996 TGTTAGGAAGGGAGAGCGATTGATTCCACCTCCTTCGTTTGAGATCTTGGTT-CGACTTA 1054
|||||||||||||||||| ||||||||||||||||| |||||||||||| || || ||||
Sbjct 1199 TGTTAGGAAGGGAGAGCGTTTGATTCCACCTCCTTCATTTGAGATCTTG-TTGCGGCTTA 1257
Query 1055 CATTCCCTGCATCATCCGCAAGAGTGAAGG 1084
|||||||||||||||| |||||||| ||||
Sbjct 1258 CATTCCCTGCATCATCTGCAAGAGTAAAGG 1287
> AT3G11880.1 | Symbols: | Protein of unknown function DUF2359,
transmembrane | chr3:3751660-3754060 FORWARD LENGTH=1707
Length=1707
Score = 158 bits (85), Expect = 5e-37
Identities = 323/432 (75%), Gaps = 39/432 (9%)
Strand=Plus/Plus
Query 680 CTTCAAAATCTCAGGTTGCGA-TATTTGTGGCGGTAGCAATGGTTTTGCGTAA-GAAACC 737
|||| |||| ||| || || | ||||||| || |||||||||| |||||||| | ||||
Sbjct 420 CTTCCAAATTTCACGTAGC-AGTATTTGTTGCACTAGCAATGGTATTGCGTAATG-AACC 477
Query 738 TGATGCTTTAACTAATATATTGCCAACT-TTGAGGGAGAATCCCAAGTATCAGGGACAAG 796
| || |||| || | ||||||| ||| | ||| || | | ||||||| ||||| |
Sbjct 478 TAATACTTTGGTTATTGTATTGCCGACTCTCAAGGAAG-A---CGAGTATCAAGGACATG 533
Query 797 ATAAGCTTCCAG-TTACAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATATATCAGTA 855
| |||||||| | || |||||||||||||||||||||||||||||||||| |||| |||
Sbjct 534 ACAAGCTTCC-GATTTTAGTTTGGATGATGGCTCAGGCCTCCCAAGGTGATTTATCTGTA 592
Query 856 GGCTTGTACTCGTGGGCGCACAACTTGTTACCGGTGGT---C-A-GTAG-C-----A--A 902
|||||||| || ||| || ||||||||||| || | | | | | | | |
Sbjct 593 GGCTTGTATTCATGGTCGTGTAACTTGTTACCAGTATTTTACCAAGAAAACTTGTTACCA 652
Query 903 G-A----GTTGCAA-TCCTCAGTCAAGGGATCTCATCCTTCAGTTGGTTGAGA-GAATCT 955
| | || |||| || |||||||| |||||||||||| ||||||| ||||| || | |
Sbjct 653 GTATCCCGTAGCAACTC-TCAGTCAATGGATCTCATCCTGCAGTTGGCTGAGATGATT-T 710
Query 956 TGTCCAACCC-GAAGGCCCGGACCATACTTGTAAATGGGGCTGTTAG-GA-AGGGAGAGC 1012
|||| || | || | | ||||| ||||||||||| || | |||| || | | |||
Sbjct 711 TGTCTAATCTTGATG-CTCGGACTATACTTGTAAACGGAACCGTTATAGATAA--ACAGC 767
Query 1013 GATTGATTCCACCTCCTTCGTTTGAGATCTTGGTTCGACTTACATTCCCTGCATCATCCG 1072
|| ||||| ||||| | | |||||| ||||| | || |||||||||||||| ||||| |
Sbjct 768 GACTGATTTCACCTTATGCATTTGAGCTCTTGATGCGGCTTACATTCCCTGCTTCATCTG 827
Query 1073 CAAGAGTGAAGG 1084
|||||| ||||
Sbjct 828 AAAGAGTAAAGG 839
Lambda K H
1.33 0.621 1.12
Gapped
Lambda K H
1.28 0.460 0.850
Effective search space used: 189781545369
Database: TAIR10_cdna_20110103_representative_gene_model_updated
Posted date: Sep 25, 2014 6:13 PM
Number of letters in database: 51,074,197
Number of sequences in database: 33,602
Matrix: blastn matrix 1 -2
Gap Penalties: Existence: 0, Extension: 2.5